prot_H-elongata_contig179405.4756.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig179405.4756.1
Unique Nameprot_H-elongata_contig179405.4756.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length76
Homology
BLAST of mRNA_H-elongata_contig179405.4756.1 vs. uniprot
Match: D7FVF0_ECTSI (Dnm1, dynamin-related GTPase involved in mitochondrial division n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVF0_ECTSI)

HSP 1 Score: 142 bits (358), Expect = 1.000e-37
Identity = 71/75 (94.67%), Postives = 74/75 (98.67%), Query Frame = 0
Query:    1 MEDLIPVVNKLQDVFSAIGQSPIDLPQIVVIGSQSSGKSSVLENVVGRDFLPRGTGIVTRRPLVLQLYNTAGSTG 75
            MEDLIPVVNKLQDVFSAIGQ+PIDLPQIVVIGSQSSGKSSVLENVVGRDFLPRGTGIVTRRPL+LQLYNTAG+ G
Sbjct:    3 MEDLIPVVNKLQDVFSAIGQTPIDLPQIVVIGSQSSGKSSVLENVVGRDFLPRGTGIVTRRPLILQLYNTAGTMG 77          
BLAST of mRNA_H-elongata_contig179405.4756.1 vs. uniprot
Match: A0A662XU30_9STRA (Dynamin-type G domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XU30_9STRA)

HSP 1 Score: 129 bits (324), Expect = 8.320e-37
Identity = 63/73 (86.30%), Postives = 70/73 (95.89%), Query Frame = 0
Query:    1 MEDLIPVVNKLQDVFSAIGQSPIDLPQIVVIGSQSSGKSSVLENVVGRDFLPRGTGIVTRRPLVLQLYNTAGS 73
            M+ LIP++NKLQDVFSAIGQSPI+LPQIVVIGSQSSGKSSVLEN+VG+DFLPRG+GIVTRRPLVLQLYNT  S
Sbjct:    1 MDQLIPIINKLQDVFSAIGQSPINLPQIVVIGSQSSGKSSVLENIVGKDFLPRGSGIVTRRPLVLQLYNTNAS 73          
BLAST of mRNA_H-elongata_contig179405.4756.1 vs. uniprot
Match: A0A836CKP3_9STRA (Dynamin central region-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKP3_9STRA)

HSP 1 Score: 137 bits (345), Expect = 5.230e-36
Identity = 67/75 (89.33%), Postives = 72/75 (96.00%), Query Frame = 0
Query:    1 MEDLIPVVNKLQDVFSAIGQSPIDLPQIVVIGSQSSGKSSVLENVVGRDFLPRGTGIVTRRPLVLQLYNTAGSTG 75
            M++LIP+VNKLQDVFSAIGQ PIDLPQIVVIGSQSSGKSSVLEN+VGRDFLPRGTGIVTRRPLVLQLYNT G+ G
Sbjct:    1 MDELIPIVNKLQDVFSAIGQPPIDLPQIVVIGSQSSGKSSVLENIVGRDFLPRGTGIVTRRPLVLQLYNTGGAAG 75          
BLAST of mRNA_H-elongata_contig179405.4756.1 vs. uniprot
Match: A0A2P4YQB7_9STRA (Dynamin-2 (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YQB7_9STRA)

HSP 1 Score: 129 bits (323), Expect = 2.550e-35
Identity = 62/73 (84.93%), Postives = 71/73 (97.26%), Query Frame = 0
Query:    1 MEDLIPVVNKLQDVFSAIGQSPIDLPQIVVIGSQSSGKSSVLENVVGRDFLPRGTGIVTRRPLVLQLYNTAGS 73
            M+ LIP++NKLQDVFSAIGQSPI+LPQIVVIGSQSSGKSSVLEN+VG+DFLPRG+GIVTRRPLVLQLYN++ S
Sbjct:    1 MDQLIPIINKLQDVFSAIGQSPINLPQIVVIGSQSSGKSSVLENIVGKDFLPRGSGIVTRRPLVLQLYNSSAS 73          
BLAST of mRNA_H-elongata_contig179405.4756.1 vs. uniprot
Match: A0A024TUW8_9STRA (Uncharacterized protein n=14 Tax=Aphanomyces TaxID=100860 RepID=A0A024TUW8_9STRA)

HSP 1 Score: 131 bits (330), Expect = 5.170e-34
Identity = 63/76 (82.89%), Postives = 71/76 (93.42%), Query Frame = 0
Query:    1 MEDLIPVVNKLQDVFSAIGQSPIDLPQIVVIGSQSSGKSSVLENVVGRDFLPRGTGIVTRRPLVLQLYNTAGSTGK 76
            M+ LIP++NKLQDVFSAIGQSPI+LPQIVV+GSQSSGKSSVLEN+VG+DFLPRG+GIVTRRPLVLQLYNT G   K
Sbjct:    1 MDQLIPIINKLQDVFSAIGQSPINLPQIVVVGSQSSGKSSVLENIVGKDFLPRGSGIVTRRPLVLQLYNTDGGASK 76          
BLAST of mRNA_H-elongata_contig179405.4756.1 vs. uniprot
Match: A0A485KTM0_9STRA (Aste57867_11655 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KTM0_9STRA)

HSP 1 Score: 131 bits (330), Expect = 5.310e-34
Identity = 63/76 (82.89%), Postives = 71/76 (93.42%), Query Frame = 0
Query:    1 MEDLIPVVNKLQDVFSAIGQSPIDLPQIVVIGSQSSGKSSVLENVVGRDFLPRGTGIVTRRPLVLQLYNTAGSTGK 76
            M+ LIP++NKLQDVFSAIGQSPI+LPQIVV+GSQSSGKSSVLEN+VG+DFLPRG+GIVTRRPLVLQLYNT G   K
Sbjct:    1 MDQLIPIINKLQDVFSAIGQSPINLPQIVVVGSQSSGKSSVLENIVGKDFLPRGSGIVTRRPLVLQLYNTDGGVSK 76          
BLAST of mRNA_H-elongata_contig179405.4756.1 vs. uniprot
Match: A0A6U4DF37_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4DF37_9STRA)

HSP 1 Score: 131 bits (330), Expect = 5.620e-34
Identity = 64/75 (85.33%), Postives = 71/75 (94.67%), Query Frame = 0
Query:    1 MEDLIPVVNKLQDVFSAIGQSPIDLPQIVVIGSQSSGKSSVLENVVGRDFLPRGTGIVTRRPLVLQLYNTAGSTG 75
            M++LIPVVNKLQDVF+AIG SPIDLPQIVVIG+QSSGKSSVLENVVG DFLPRGTGIVTRRPL+LQL+NT+G  G
Sbjct:    1 MQNLIPVVNKLQDVFNAIGNSPIDLPQIVVIGAQSSGKSSVLENVVGEDFLPRGTGIVTRRPLILQLFNTSGEAG 75          
BLAST of mRNA_H-elongata_contig179405.4756.1 vs. uniprot
Match: A0A6U4DCU1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4DCU1_9STRA)

HSP 1 Score: 131 bits (330), Expect = 5.810e-34
Identity = 64/75 (85.33%), Postives = 71/75 (94.67%), Query Frame = 0
Query:    1 MEDLIPVVNKLQDVFSAIGQSPIDLPQIVVIGSQSSGKSSVLENVVGRDFLPRGTGIVTRRPLVLQLYNTAGSTG 75
            M++LIPVVNKLQDVF+AIG SPIDLPQIVVIG+QSSGKSSVLENVVG DFLPRGTGIVTRRPL+LQL+NT+G  G
Sbjct:    1 MQNLIPVVNKLQDVFNAIGNSPIDLPQIVVIGAQSSGKSSVLENVVGEDFLPRGTGIVTRRPLILQLFNTSGEAG 75          
BLAST of mRNA_H-elongata_contig179405.4756.1 vs. uniprot
Match: A0A2D4BI22_PYTIN (Dynamin-2 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BI22_PYTIN)

HSP 1 Score: 130 bits (327), Expect = 1.440e-33
Identity = 62/75 (82.67%), Postives = 71/75 (94.67%), Query Frame = 0
Query:    1 MEDLIPVVNKLQDVFSAIGQSPIDLPQIVVIGSQSSGKSSVLENVVGRDFLPRGTGIVTRRPLVLQLYNTAGSTG 75
            ME LIP++NKLQDVFSAIGQSP++LPQIVVIGSQSSGKSSVLEN+VGRDFLPRG+GIVTRRPL+LQLYN +  +G
Sbjct:    1 MEQLIPIINKLQDVFSAIGQSPLNLPQIVVIGSQSSGKSSVLENIVGRDFLPRGSGIVTRRPLILQLYNVSSPSG 75          
BLAST of mRNA_H-elongata_contig179405.4756.1 vs. uniprot
Match: A0A1R1PLQ2_ZANCU (Dynamin-related protein dnm1 n=1 Tax=Zancudomyces culisetae TaxID=1213189 RepID=A0A1R1PLQ2_ZANCU)

HSP 1 Score: 120 bits (300), Expect = 3.700e-33
Identity = 60/76 (78.95%), Postives = 66/76 (86.84%), Query Frame = 0
Query:    1 MEDLIPVVNKLQDVFSAIGQSPIDLPQIVVIGSQSSGKSSVLENVVGRDFLPRGTGIVTRRPLVLQLYNTAGSTGK 76
            M+DLIP VNKLQ+VF+ +GQ  IDLPQIVV+GSQSSGKSSVLEN+VG DFLPRG GIVTRRPLVLQL N   STGK
Sbjct:    1 MDDLIPTVNKLQEVFNTLGQDQIDLPQIVVVGSQSSGKSSVLENLVGIDFLPRGVGIVTRRPLVLQLVNIPTSTGK 76          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig179405.4756.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVF0_ECTSI1.000e-3794.67Dnm1, dynamin-related GTPase involved in mitochond... [more]
A0A662XU30_9STRA8.320e-3786.30Dynamin-type G domain-containing protein (Fragment... [more]
A0A836CKP3_9STRA5.230e-3689.33Dynamin central region-domain-containing protein n... [more]
A0A2P4YQB7_9STRA2.550e-3584.93Dynamin-2 (Fragment) n=1 Tax=Phytophthora palmivor... [more]
A0A024TUW8_9STRA5.170e-3482.89Uncharacterized protein n=14 Tax=Aphanomyces TaxID... [more]
A0A485KTM0_9STRA5.310e-3482.89Aste57867_11655 protein n=1 Tax=Aphanomyces stella... [more]
A0A6U4DF37_9STRA5.620e-3485.33Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A6U4DCU1_9STRA5.810e-3485.33Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A2D4BI22_PYTIN1.440e-3382.67Dynamin-2 n=1 Tax=Pythium insidiosum TaxID=114742 ... [more]
A0A1R1PLQ2_ZANCU3.700e-3378.95Dynamin-related protein dnm1 n=1 Tax=Zancudomyces ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022812Dynamin superfamilyPRINTSPR00195DYNAMINcoord: 50..67
score: 82.65
coord: 25..43
score: 83.35
IPR022812Dynamin superfamilyPFAMPF00350Dynamin_Ncoord: 28..71
e-value: 2.2E-17
score: 63.6
IPR022812Dynamin superfamilyPANTHERPTHR11566DYNAMINcoord: 1..71
NoneNo IPR availableGENE3D3.40.50.300coord: 1..70
e-value: 3.7E-39
score: 136.5
IPR027741Dynamin-1PANTHERPTHR11566:SF32DYNAMIN-1coord: 1..71
IPR019762Dynamin, GTPase region, conserved sitePROSITEPS00410G_DYNAMIN_1coord: 51..60
IPR030381Dynamin-type guanine nucleotide-binding (G) domainPROSITEPS51718G_DYNAMIN_2coord: 22..76
score: 23.549
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig179405contigH-elongata_contig179405:467..694 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig179405.4756.1mRNA_H-elongata_contig179405.4756.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig179405 467..694 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig179405.4756.1 ID=prot_H-elongata_contig179405.4756.1|Name=mRNA_H-elongata_contig179405.4756.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=76bp
MEDLIPVVNKLQDVFSAIGQSPIDLPQIVVIGSQSSGKSSVLENVVGRDF
LPRGTGIVTRRPLVLQLYNTAGSTGK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022812Dynamin_SF
IPR027741DNM1
IPR019762Dynamin_GTPase_CS
IPR030381G_DYNAMIN_dom
IPR027417P-loop_NTPase