mRNA_H-elongata_contig17926.4749.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig17926.4749.1
Unique NamemRNA_H-elongata_contig17926.4749.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig17926.4749.1 vs. uniprot
Match: A0A6H5JUC6_9PHAE (TOPEUc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUC6_9PHAE)

HSP 1 Score: 603 bits (1556), Expect = 1.080e-201
Identity = 295/388 (76.03%), Postives = 333/388 (85.82%), Query Frame = 1
Query:  958 KKFKEKTRKDRIEEAMKVYKWWEEPSLGHGKQWDSLEHNGAYFAPEYQPHRVKLKYNGEDVNLTPRQEEIATFYASMPLDGPQLKEQGDVFNRNFFEDFKAVLGKGHKIKKFELLDFSAMRRYLETAKQIKRAATDREKAVTKIEKEELKHKYCYAIVDGHLEMVGNFTVEPPGLFRGRGKHPKTGKVKARVMPSDIALNFGESVCVPQCNVPGYAWQHVQHDPSVTWLGKWDGNLAGTKYMMLAASSSFKGKSDMAKYNKAMALKGNIDKIRTDYTKKLNSANAQTKQIATAVWIIDQLALRVGGEKGDDEADTVGCCSLRREHLAFNPDPNVHEIDLEFLGKDSMLFKQTIDFDKYGDVGMRVFNNLKGFCKKKHHSEELFDRLDP 2121
            KK K+ TR ++IE+AMKVY WWEEP+   GKQWDSLEHNGA+FAPEY+PH VKLKY+G++VNLT +QEE+ATFYASMPLDGPQL EQG VFN+NFF DFKAVLGKGH IK F+LLDFSA+R +L+  KQIKRAATD EKA  K  KEEL HKY YAIVDGHLE VGN+ VEPPGLFRGRG+HPKTGK+KARV  SDIA+N  E VCVP+C++PGYAWQ VQH+PS TWL KWDG L GTKYMMLAASSSFKGKSDMAKY+KAM LKG I++IRTDY KKL+S++ +TKQIATAVWIID+LALRVGGEKG DEADTVGCCSLR EHL F+   N  EIDLEFLGKDSMLFK+TIDFD+YGDVG RVF NL+ FCK K  SEE+FD LDP
Sbjct:  388 KKPKKLTRAEKIEKAMKVYMWWEEPAHEPGKQWDSLEHNGAHFAPEYKPHGVKLKYDGKEVNLTTQQEEVATFYASMPLDGPQLAEQGKVFNKNFFTDFKAVLGKGHFIKDFKLLDFSAIRAHLDITKQIKRAATDGEKAAAKTVKEELVHKYSYAIVDGHLEKVGNYNVEPPGLFRGRGEHPKTGKLKARVTASDIAINCAEGVCVPRCDMPGYAWQSVQHNPSATWLSKWDGLLVGTKYMMLAASSSFKGKSDMAKYDKAMKLKGFIERIRTDYIKKLSSSDRRTKQIATAVWIIDKLALRVGGEKGQDEADTVGCCSLRTEHLTFHATNN--EIDLEFLGKDSMLFKETIDFDRYGDVGRRVFKNLQAFCKGKRQSEEVFDYLDP 773          
BLAST of mRNA_H-elongata_contig17926.4749.1 vs. uniprot
Match: D7G042_ECTSI (TOPEUc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G042_ECTSI)

HSP 1 Score: 602 bits (1551), Expect = 4.010e-199
Identity = 296/389 (76.09%), Postives = 333/389 (85.60%), Query Frame = 1
Query:  958 KKFKEKT-RKDRIEEAMKVYKWWEEPSLGHGKQWDSLEHNGAYFAPEYQPHRVKLKYNGEDVNLTPRQEEIATFYASMPLDGPQLKEQGDVFNRNFFEDFKAVLGKGHKIKKFELLDFSAMRRYLETAKQIKRAATDREKAVTKIEKEELKHKYCYAIVDGHLEMVGNFTVEPPGLFRGRGKHPKTGKVKARVMPSDIALNFGESVCVPQCNVPGYAWQHVQHDPSVTWLGKWDGNLAGTKYMMLAASSSFKGKSDMAKYNKAMALKGNIDKIRTDYTKKLNSANAQTKQIATAVWIIDQLALRVGGEKGDDEADTVGCCSLRREHLAFNPDPNVHEIDLEFLGKDSMLFKQTIDFDKYGDVGMRVFNNLKGFCKKKHHSEELFDRLDP 2121
            K FKE T R ++IE+AMKVY WWEEP+   GKQWDSLEHNGA+FAPEY+PH VKLKY+G++V+LT +QEE+ATFYASMPLDGPQL EQG VFN+NFF DFKAVLGKGH IK F+LLDFSA+R +L+  KQIK AATD EKA  K  KEEL HKY YAIVDGHLE VGN+ VEPPGLFRGRG+HPKTGK+KARV  SDIA+N  E VCVP+CN+PGYAWQ VQH+PS TWL KWDG LAGTKYMMLAASSSFKGKSDMAKY+KAM LKG I++IRTDY KKL+S++ +TKQIATAVWIID+LALRVGGEKG DEADTVGCCSLR EHL F+   N  EIDLEFLGKDSMLFK+TIDFD+YGDVG RVF NL+ FCK K  SEE+FD LDP
Sbjct:  335 KGFKEMTTRAEKIEKAMKVYMWWEEPAHEPGKQWDSLEHNGAHFAPEYKPHGVKLKYDGKEVHLTTQQEEVATFYASMPLDGPQLAEQGKVFNKNFFTDFKAVLGKGHVIKDFKLLDFSAIRAHLDITKQIKLAATDGEKAAAKTVKEELVHKYSYAIVDGHLEKVGNYNVEPPGLFRGRGEHPKTGKLKARVTASDIAINCAEGVCVPRCNMPGYAWQSVQHNPSATWLSKWDGLLAGTKYMMLAASSSFKGKSDMAKYDKAMKLKGFIERIRTDYVKKLSSSDRRTKQIATAVWIIDKLALRVGGEKGQDEADTVGCCSLRTEHLTFHATNN--EIDLEFLGKDSMLFKETIDFDRYGDVGRRVFKNLQAFCKGKRQSEEVFDYLDP 721          
BLAST of mRNA_H-elongata_contig17926.4749.1 vs. uniprot
Match: A0A836C9X0_9STRA (DNA topoisomerase I n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9X0_9STRA)

HSP 1 Score: 466 bits (1199), Expect = 9.620e-152
Identity = 223/379 (58.84%), Postives = 280/379 (73.88%), Query Frame = 1
Query: 1000 AMKVYKWWEEPSLGHGKQWDSLEHNGAYFAPEYQPHRVKLKYNGEDVNLTPRQEEIATFYASMPLDGPQLKEQGD--VFNRNFFEDFKAVLGKGHKIK--KFELLDFSAMRRYLETAKQIKRAATDREKAVTKIEKEELKHKYCYAIVDGHLEMVGNFTVEPPGLFRGRGKHPKTGKVKARVMPSDIALNFGESVCVPQCNVPGYAWQHVQHDPSVTWLGKWDGNLAG-TKYMMLAASSSFKGKSDMAKYNKAMALKGNIDKIRTDYTKKLNSANAQTKQIATAVWIIDQLALRVGGEKGDDEADTVGCCSLRREHLAFNPDPNVHEIDLEFLGKDSMLFKQTIDFDKYGDVGMRVFNNLKGFCKKKHHSEELFDRLDP 2121
             ++ YKWWEEP L  G+QW  LEHNG  F  EY+PH V L Y+GE++ L+P  EEIATF+A +PLDGPQL +     VF+ NFF D+K  +  GH +K  KF+  DF AMR +L+  + IK+AATD E+A  K EKE   H +  AIVDGHLE VGNF +EPPGLFRGRGKHPKTGK+K R  PS++ +N GE   VPQC VPG+AW +VQHDP V WL  W  N+    KY ML+ASSSFKGKSDM KYNKAM LKG+ID IR +Y + LN++ ++ +Q+ATA+W+ID+LALRVGGEKG+DEADTVGCC+LR EH+ F P     E++LEFLGKDSMLFKQ IDF  YGD+G +VF+NL  FCK +  +E++F ++DP
Sbjct:   52 VLQAYKWWEEPPLAPGRQWSHLEHNGMSFPDEYEPHGVPLMYDGEEMELSPEDEEIATFFADVPLDGPQLGDAATAKVFSANFFSDWKESMPTGHPLKNAKFDKCDFGAMRAHLQQRRLIKKAATDGERAAAKAEKERRFHLFGLAIVDGHLEKVGNFIMEPPGLFRGRGKHPKTGKLKKRAYPSEVTVNIGEEAKVPQCPVPGFAWGNVQHDPGVAWLSTWKENINNMNKYAMLSASSSFKGKSDMEKYNKAMRLKGHIDAIRRNYERGLNASTSEMRQLATAMWLIDKLALRVGGEKGEDEADTVGCCTLRVEHMTFGP-AGTREMELEFLGKDSMLFKQNIDFTAYGDIGSKVFDNLTAFCKGRKPAEQVFQKIDP 429          
BLAST of mRNA_H-elongata_contig17926.4749.1 vs. uniprot
Match: A0A7S2WTQ7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTQ7_9STRA)

HSP 1 Score: 456 bits (1172), Expect = 1.230e-146
Identity = 222/391 (56.78%), Postives = 282/391 (72.12%), Query Frame = 1
Query:  961 KFKEKTRKDRIEEAMKVYKWWEEPSLGHGKQWDSLEHNGAYFAPEYQPHRVKLKYNGEDVNLTPRQEEIATFYASMPLDGPQL--KEQGDVFNRNFFEDFKAVLGKGHKIKKFELLDFSAMRRYLETAKQIKRAATDREKAVTKIEKEELKHKYCYAIVDGHLEMVGNFTVEPPGLFRGRGKHPKTGKVKARVMPSDIALNFGESVCVPQCNVPGYAWQHVQHDPSVTWLGKWDGNLAG-TKYMMLAASSSFKGKSDMAKYNKAMALKGNIDKIRTDYTKKLNSANAQTKQIATAVWIIDQLALRVGGEKGDDEADTVGCCSLRREHLAFNPD-PNVHEIDLEFLGKDSMLFKQTIDFDKYGDVGMRVFNNLKGFCKKKHHSEELFDRLDP 2121
            K K+ T+ +R+++AMK YKWWE   L  G+QW +LEHNG  F PEY+PH V LKY G+D+ L P  EE+ATFY  +P DGPQL   E   +F +NFF DFK  LG  H+IKKF+  DFSA+R ++E  + IK+AAT+ EK   K EK+ L+ KY YA+VDGHLE +GN   EPP LFRGRGKHP  GKVK RV+P  + +N G++  +P C  PG+AW  VQHD +VTW+  W  N+ G  KY+MLAA SSFKGKSD  KY KAM LKG I KIR DY K LN+ +  ++Q+ATA+W+ID LALRVGGEKG+DEADTVGCCSLR EH+ F  +    H+I+LEFLGKDSM +K+T DF +YG+VG++VF N   FCKKK   +++ D+LDP
Sbjct:  140 KLKKFTKVERLDQAMKSYKWWEHEDLPAGQQWRTLEHNGLCFPPEYKPHGVALKYEGKDLVLPPDLEELATFYGLVPDDGPQLGDPETRPIFQKNFFTDFKKALGGEHEIKKFQGCDFSAIREHIEKERLIKKAATEVEKQAAKEEKQSLQFKYGYALVDGHLEKIGNTMAEPPSLFRGRGKHPLMGKVKQRVLPEQVTINIGKNAKIPVCPQPGHAWGAVQHDNTVTWMATWHENILGKNKYVMLAAQSSFKGKSDRGKYEKAMRLKGCIGKIRADYKKNLNAKDIFSRQLATAMWVIDILALRVGGEKGEDEADTVGCCSLRVEHIKFGQEGQGPHDIELEFLGKDSMQYKETTDFSRYGEVGIQVFQNFVSFCKKKKPDQQVLDQLDP 530          
BLAST of mRNA_H-elongata_contig17926.4749.1 vs. uniprot
Match: A0A7S2CY07_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CY07_9STRA)

HSP 1 Score: 441 bits (1135), Expect = 1.280e-140
Identity = 242/455 (53.19%), Postives = 301/455 (66.15%), Query Frame = 1
Query:  817 KGSTPTTPKT--KVKAEP-VRRVSSSSASSGKARVPRTAAASAMKPRDTEKK-----------FKEKTRKDRIEEAMKVYKWWEEPSLGHGKQWDSLEHNGAYFAPEYQPHRVKLKYNGEDVNLTPRQEEIATFYASMPLDGPQL--KEQGDVFNRNFFEDFKAVLGKGHKIKKFELLDFSAMRRYLETAKQIKRAATDREKAVTKIEKEELKHKYCYAIVDGHLEMVGNFTVEPPGLFRGRGKHPKTGKVKARVMPSDIALNFGESVCVPQCNVPGYAWQHVQHDPSVTWLGKWDGNLAG-TKYMMLAASSSFKGKSDMAKYNKAMALKGNIDKIRTDYTKKLNSANAQTKQIATAVWIIDQLALRVGGEKGDDEADTVGCCSLRREHLAFN-PDPNVHEIDLEFLGKDSMLFKQTIDF--DKYGDVGMRVFNNLKGFCKKKHHSEELFDRLDP 2121
            K +TP   K   KVK EP V+  S S ++SGK +   TAA      R   KK            K+  + +R+++AMK +KWWE   L  G QW  +EHNG  F PEY+PH V L Y GE + L+P  EE+ATFYA++P DGPQL   E   +F +NFF DFK +LGK HK+++F+  DFS +   +   K I +AATD EKA  K EKEEL+ KY +AIVD HLE VGN   EPP LFRGRGKHP  GKVK R     ++LN  E+  VP+C  PG+AW  VQHD SVTWL  W  N+ G  KY+MLAA SSFKGKSD  KY KAM LKG+I KIR DY K L++ +  ++Q+ATA+W+ID LALRVGGEKGDDEADTVGCCSLR EHL    P+   HEI+LEFLGKDSML+K+T DF  ++YGD G +V+ NL  FCK K   +++ D L+P
Sbjct:  118 KNATPERKKVLAKVKPEPRVKTESQSGSASGKRKA--TAAGGNNTKRSKPKKEVKSEKGTRGALKQMNKMERLDQAMKAFKWWEHEDLPDGVQWLGMEHNGLAFPPEYEPHGVPLLYKGEPIELSPELEELATFYAAVPDDGPQLGDPETRTIFQKNFFTDFKKMLGKSHKVQEFKHCDFSRIAANIAEQKMINKAATDVEKANKKREKEELQFKYGFAIVDKHLERVGNTMCEPPSLFRGRGKHPLMGKVKQRCTTEQVSLNLAETTTVPRCPQPGHAWGAVQHDNSVTWLATWHENILGKNKYVMLAAQSSFKGKSDRDKYLKAMKLKGSIKKIRADYKKNLDAKDKFSRQLATAMWVIDVLALRVGGEKGDDEADTVGCCSLRVEHLHCGLPEQGPHEIELEFLGKDSMLYKETTDFGREEYGDTGKKVYKNLIQFCKGKKQEQQVLDLLNP 570          
BLAST of mRNA_H-elongata_contig17926.4749.1 vs. uniprot
Match: A0A7S3XV41_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV41_HETAK)

HSP 1 Score: 439 bits (1128), Expect = 2.520e-139
Identity = 224/399 (56.14%), Postives = 279/399 (69.92%), Query Frame = 1
Query:  964 FKEKTRKDRIEEAMKVYKWWEEPSLGHGKQWDSLEHNGAYFAPEYQPHRVKLKYNGEDVNLTPRQEEIATFYASMPLDGPQLKEQGD--VFNRNFFEDFKAVL-------GKGHKIKKFELLDFSAMRRYLETAKQIKRAATDREKAVTKIEKEELKHKYCYAIVDGHLEMVGNFTVEPPGLFRGRGKHPKTGKVKARVMPSDIALNFGESVCVPQCNVPGYAWQHVQHDPSVTWLGKWDGNLAGT-KYMMLAASSSFKGKSDMAKYNKAMALKGNIDKIRTDYTKKLNSANAQTKQIATAVWIIDQLALRVGGEKGDDEADTVGCCSLRREHLAFNP---DPNVHEIDLEFLGKDSMLFKQTIDFDKYGDVGMRVFNNLKGFCKKKHHSEELFDRLDP 2121
            FKE TR ++++ AMK +KWWE P L  G  W  LEHNG  F PE++ H +KL Y GE ++L+P QEE+AT YA+MP DGPQL +     +F +NF+ DFK VL       GK   +  F+  DFS ++ YL   K +K+  TD E+  TK EKE     + YAIVDGHLE VGN  +EPPGLFRGRGKHPKTG  K RV P  + +N GE+   P+C +PG+AW +VQHDP+VTW+  W+ N+ G+ KY+ LAASSSFKGKSD  KYNKA  LKG I+KIR DY + L   + + +QIATA+WIID LALRVGGEKG+DEADTVGCCSLR EHL F+    +   + ++LEFLGKDSMLFKQ IDF KYG VG RVF NL  FC+KK  SE++FD+L P
Sbjct:  171 FKEATRVEKLDLAMKAFKWWEAPELEEGILWRYLEHNGIIFPPEHKVHGIKLLYEGEPLDLSPEQEELATLYAAMPDDGPQLGDPATRPIFQKNFWSDFKQVLDPKGPWKGKNFDVA-FKKFDFSLIKEYLNQQKILKKTQTDSERQKTKDEKEAAVLLHGYAIVDGHLERVGNMMMEPPGLFRGRGKHPKTGLFKRRVFPGQVTINIGENARPPKCPLPGHAWMNVQHDPTVTWMATWNENIMGSNKYVQLAASSSFKGKSDRDKYNKAATLKGYINKIREDYGQNLWKKSHRPRQIATAMWIIDVLALRVGGEKGEDEADTVGCCSLRVEHLRFDTSGDEARKYTLELEFLGKDSMLFKQEIDFGKYGKVGRRVFKNLVEFCQKKKRSEDVFDQLTP 568          
BLAST of mRNA_H-elongata_contig17926.4749.1 vs. uniprot
Match: A0A7R9YDN3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YDN3_9STRA)

HSP 1 Score: 434 bits (1116), Expect = 7.520e-139
Identity = 213/390 (54.62%), Postives = 270/390 (69.23%), Query Frame = 1
Query:  961 KFKEKTRKDRIEEAMKVYKWWEEPSLGHGKQWDSLEHNGAYFAPEYQPHRVKLKYNGEDVNLTPRQEEIATFYASMPLDGPQL--KEQGDVFNRNFFEDFKAVLGKGHKIKKFELLDFSAMRRYLETAKQIKRAATDREKAVTKIEKEELKHKYCYAIVDGHLEMVGNFTVEPPGLFRGRGKHPKTGKVKARVMPSDIALNFGESVCVPQCNVPGYAWQHVQHDPSVTWLGKWDGNLA-GTKYMMLAASSSFKGKSDMAKYNKAMALKGNIDKIRTDYTKKLNSANAQTKQIATAVWIIDQLALRVGGEKGDDEADTVGCCSLRREHLAFNPDPNVHEIDLEFLGKDSMLFKQTIDFDKYGDVGMRVFNNLKGFCKKKHHSEELFDRLDP 2121
            K K  ++++R++ AMK +KWWE P    G QW  LEH G  F P+Y PH   + Y+G D+ L    EE+AT+YA +PLDGPQL   E    FN+NF  DF+ VLG  H I+ F+ + ++ +R Y  + K +KR+ATD EKA  K +K   + ++ +A+VDGHLE VGNFT+E PGLFRGRGKHPKTGK+K R+ P  + LNFGE+   P C +PG+AW  VQHD SVTWL  W  N+    KY+MLAA SS KGKSD  KY KA  LKG+I+ IR +Y   L S +   +QIATA+W+ID  ALRVGGEKG+DEADTVGCCSLR EH  F+ D    ++DLEFLGKDSM FKQTIDF  YGD+GM+V  NLK F + K  SE++FDRL+P
Sbjct:   95 KAKYLSKQERVDAAMKAFKWWEHPDHPEGIQWRQLEHAGVAFPPDYVPHNTPITYDGRDIALNAAAEEVATWYADLPLDGPQLGDPEWAPTFNKNFMSDFRKVLGDRHAIRSFDKISWTGLRNYTASKKLVKRSATDDEKAKVKADKLATRSRFGFALVDGHLEKVGNFTIELPGLFRGRGKHPKTGKIKERIPPEQLTLNFGENAPPPICPIPGHAWGAVQHDQSVTWLVTWRENIMEANKYVMLAAMSSLKGKSDRDKYAKAAKLKGHIEAIRRNYRTGLQSKSGGDRQIATAMWLIDIYALRVGGEKGEDEADTVGCCSLRLEHFTFHEDSE-SQVDLEFLGKDSMRFKQTIDFSTYGDIGMKVLRNLKEFMRGKRKSEDVFDRLNP 483          
BLAST of mRNA_H-elongata_contig17926.4749.1 vs. uniprot
Match: A0A8K1C500_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C500_PYTOL)

HSP 1 Score: 433 bits (1113), Expect = 2.220e-138
Identity = 215/389 (55.27%), Postives = 280/389 (71.98%), Query Frame = 1
Query:  958 KKFKEKTRKDRIEEAMKVYKWWEEPSLGHGKQWDSLEHNGAYFAPEYQPHRVKLKYNGEDVNLTPRQEEIATFYASMPLDGPQL--KEQGDVFNRNFFEDFKAVLGKGHKIKKFELLDFSAMRRYLETAKQIKRAATDREKAVTKIEKEELKHKYCYAIVDGHLEMVGNFTVEPPGLFRGRGKHPKTGKVKARVMPSDIALNFGESVCVPQCNVPGYAWQHVQHDPSVTWLGKWDGN-LAGTKYMMLAASSSFKGKSDMAKYNKAMALKGNIDKIRTDYTKKLNSANAQTKQIATAVWIIDQLALRVGGEKGDDEADTVGCCSLRREHLAFNPDPNVHEIDLEFLGKDSMLFKQTIDFDKYGDVGMRVFNNLKGFCKKKHHSEELFDRL 2115
            +K K  ++ +R++ A+K Y+WW+   L  G QW +LEHNG  F P Y PH+V L YNG+ + LTP QEE+A+FYA++P DGPQL   +   +FN+NFF DFK VLG+GH++K FE  DFS +  +LE  ++ K++ T  EK   K  KE  +    +AIVDGHLE VGNF +EPPGLFRGRG+HPKTG +K RVMP ++ +N G S  VP CNVPG+AW+ V H  +V+WL  W+ N + G KY+ LAASSSFKGKSDMAKY KA  LK  IDKIR DY K L + ++ TKQ +TA+W+ID LALRVG EKG+DEADTVGCCSLR EHL+F+ D N   + L FLGKDSM +  T++ +KYGD+G +V+ NLK FC+KK  +EE+F+ L
Sbjct:  140 RKLKVHSKSERLDMAIKAYRWWKAEELPEGIQWRTLEHNGVMFPPAYVPHKVPLVYNGKQIELTPAQEELASFYAAIPKDGPQLGNPKTAKIFNKNFFTDFKKVLGRGHEVKTFEQCDFSLIAAHLEKLREEKKSMTKEEKQPEKERKELEQFTNGFAIVDGHLEKVGNFRIEPPGLFRGRGEHPKTGTLKERVMPGEVTVNVGISDRVPICNVPGHAWKEVIHRDTVSWLAYWNENVMGGIKYVWLAASSSFKGKSDMAKYEKARRLKKYIDKIRKDYQKGLRAKDSLTKQRSTAMWVIDILALRVGNEKGEDEADTVGCCSLRVEHLSFS-DTNC-ALTLSFLGKDSMPYNNTVELEKYGDIGKQVYANLKKFCEKKDKNEEVFNEL 526          
BLAST of mRNA_H-elongata_contig17926.4749.1 vs. uniprot
Match: A0A7S3PD47_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PD47_9STRA)

HSP 1 Score: 424 bits (1089), Expect = 1.220e-134
Identity = 214/403 (53.10%), Postives = 279/403 (69.23%), Query Frame = 1
Query:  952 TEKKFKEKTRKDRIEEAMKVYKWWEEPSLGHGKQWDSLEHNGAYFAPEYQPHRVKLKYNGEDVNLTPRQEEIATFYASMPLDGPQL--KEQGDVFNRNFFEDFKAVLGKGHKIKKFELLDFSAMRRYLETAKQIKRAATDREKAVTKIEKEELKHKYCYAIVDGHLEMVGNFTVEPPGLFRGRGKHPKTGKVKARVMPSDIALNFGESVCVPQCNVPGYAWQHVQHDPSVTWLGKWDGNLAG-TKYMMLAASSSFKGKSDMAKYNKAMALKGNIDKIRTDYTKKLNSANAQTKQIATAVWIIDQLALRVGGEKG-DDEADTVGCCSLRREHLAFNP----DPNVHEIDLEFLGKDSMLFKQTIDF-----DKYGDVGMRVFNNLKGFCKKKHHSEELFDRLDP 2121
            TE++ K+  + DR++ AM+ + WWE P L  G  W ++EH+G  F  EY+PH VK+ Y+G+ V+LTP QEE ATF+A+M  DG  L   +   +F +NFF DF+ +LGK H IK F+  DF  +R++L   K I++A +D+E+   K ++ +  HKY YA+VDGH+E VGNF +EPPG FRGRG+HPK GK+K+RV P  ++LN  E   +P C VPG+AW  V+HDP   WL  W  N+ G +KYM LAA SSFKGKSD +KY+KA  L   I  IR  Y K L S + +TKQ+ATA WIIDQLALRVGGEK  D+EADTVGCCSLR EHL F+P    D N  EI+LEFLGKDSMLFKQTIDF     +  G  G +++ NLK FCKKK  S+E+FD+++P
Sbjct:   93 TERQLKKLDKTDRLQYAMQAFLWWEAPVLAEGMNWSTMEHSGVSFPEEYEPHGVKMLYDGQPVDLTPAQEEAATFFAAMDPDGMHLGNPKTAPIFIKNFFADFREILGKKHIIKDFKKCDFEPIRKHLNEQKIIRKAISDKERQANKEDRNQTLHKYGYAVVDGHIERVGNFNMEPPGAFRGRGEHPKMGKLKSRVSPEQVSLNCSECAPIPACPVPGHAWGDVRHDPRGQWLATWKENINGQSKYMQLAAQSSFKGKSDRSKYSKAALLCKYIHDIRKSYKKDLKSKDTETKQLATATWIIDQLALRVGGEKDTDEEADTVGCCSLRVEHLHFDPNGEGDEN-KEIELEFLGKDSMLFKQTIDFGSALYNDNGGHGTKIYENLKSFCKKKKSSDEVFDKINP 494          
BLAST of mRNA_H-elongata_contig17926.4749.1 vs. uniprot
Match: K3WII9_GLOUD (DNA topoisomerase I n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WII9_GLOUD)

HSP 1 Score: 423 bits (1087), Expect = 1.990e-134
Identity = 221/413 (53.51%), Postives = 282/413 (68.28%), Query Frame = 1
Query:  886 SASSGKARVPRTAAASAMKPRDTEKKFKEKTRKDRIEEAMKVYKWWEEPSLGHGKQWDSLEHNGAYFAPEYQPHRVKLKYNGEDVNLTPRQEEIATFYASMPLDGPQLKEQ--GDVFNRNFFEDFKAVLGKGHKIKKFELLDFSAMRRYLETAKQIKRAATDREKAVTKIEKEELKHKYCYAIVDGHLEMVGNFTVEPPGLFRGRGKHPKTGKVKARVMPSDIALNFGESVCVPQCNVPGYAWQHVQHDPSVTWLGKWDGN-LAGTKYMMLAASSSFKGKSDMAKYNKAMALKGNIDKIRTDYTKKLNSANAQTKQIATAVWIIDQLALRVGGEKGDDEADTVGCCSLRREHLAFNPDPNVHEIDLEFLGKDSMLFKQTIDFDKYGDVGMRVFNNLKGFCKKKHHSEELFDRL 2115
            SAS  KARV +   A++M+      K K  ++ +R++ A+K Y+WW    L  G QW SLEHNG  F P Y PH V + Y+G++V LT  QEEIA+FYA++P DGPQL        FN+NFF DF+  LGK H++KKFEL DFS +  YLE  ++ K+  T  EKA  K +KE       +A+VDGHLE VGNF +EPPGLFRGRG+HPKTG +K RVMP ++ +N G S  VP CNVPG+AW+ V H  +V+WL  W+ N + G KY+ LAASSSFKGKSDMAKY KA  LK  IDKIR DY K L + +  T+Q +TA+W+ID LALRVG EKG+DEADTVGCCSLR EH++F+     +E+ L FLGKDSM +  T+   +YGDVG  ++ NL+ FC KK   EE+FD L
Sbjct:  129 SASDSKARVKKENGAASMR------KLKVHSKAERLDMAIKAYRWWNAEELPEGIQWRSLEHNGVMFPPAYIPHHVPMVYDGKEVKLTATQEEIASFYAAIPKDGPQLGTPTIAKKFNQNFFADFRKALGKNHEVKKFELCDFSKIAAYLEEQREEKKNMTKDEKAPEKEKKEMELFTNGFAVVDGHLEKVGNFRIEPPGLFRGRGEHPKTGTLKERVMPGEVTVNVGISDRVPICNVPGHAWKEVIHRDTVSWLAYWNENVMGGIKYVWLAASSSFKGKSDMAKYEKARRLKKCIDKIRKDYIKGLKAKDMFTRQRSTAMWVIDVLALRVGNEKGEDEADTVGCCSLRVEHVSFSE--TNYELTLSFLGKDSMPYNNTVALAQYGDVGKLIYGNLQKFCAKKKKHEEVFDEL 533          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17926.4749.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JUC6_9PHAE1.080e-20176.03TOPEUc domain-containing protein n=1 Tax=Ectocarpu... [more]
D7G042_ECTSI4.010e-19976.09TOPEUc domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A836C9X0_9STRA9.620e-15258.84DNA topoisomerase I n=1 Tax=Tribonema minus TaxID=... [more]
A0A7S2WTQ7_9STRA1.230e-14656.78Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2CY07_9STRA1.280e-14053.19Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3XV41_HETAK2.520e-13956.14Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7R9YDN3_9STRA7.520e-13954.62Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A8K1C500_PYTOL2.220e-13855.27Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S3PD47_9STRA1.220e-13453.10Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
K3WII9_GLOUD1.990e-13453.51DNA topoisomerase I n=1 Tax=Globisporangium ultimu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17926contigH-elongata_contig17926:613..6950 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score604.0
Seed ortholog evalue9.1e-170
Seed eggNOG ortholog2880.D7G042
Preferred nameTOP1
KEGG koko:K03163
GOsGO:0000166,GO:0000228,GO:0000932,GO:0000976,GO:0000977,GO:0000978,GO:0000987,GO:0001012,GO:0001067,GO:0001650,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003690,GO:0003697,GO:0003824,GO:0003916,GO:0003917,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005730,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006265,GO:0006325,GO:0006338,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007059,GO:0007623,GO:0008144,GO:0008150,GO:0008152,GO:0008219,GO:0009058,GO:0009059,GO:0009330,GO:0009987,GO:0010468,GO:0012501,GO:0016043,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016853,GO:0017076,GO:0018105,GO:0018193,GO:0018209,GO:0019222,GO:0019538,GO:0019904,GO:0030554,GO:0031298,GO:0031974,GO:0031981,GO:0032501,GO:0032553,GO:0032555,GO:0032559,GO:0032922,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0035639,GO:0035770,GO:0036094,GO:0036211,GO:0036464,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043565,GO:0043596,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044452,GO:0044454,GO:0044464,GO:0046483,GO:0048511,GO:0050789,GO:0050896,GO:0051276,GO:0060255,GO:0065007,GO:0070013,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097100,GO:0097159,GO:0097367,GO:0140096,GO:0140097,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901576,GO:1990837,GO:1990904
EggNOG free text desc.DNA topoisomerase type I activity
EggNOG OGsCOG3569@1,KOG0981@2759
EC5.99.1.2
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03032
Hectar predicted targeting categoryother localisation
Exons6
Model size2127
Cds size2127
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17926.4749.1prot_H-elongata_contig17926.4749.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig17926 613..6950 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930035.2274046-CDS-H-elongata_contig17926:612..17971622930035.2274046-CDS-H-elongata_contig17926:612..1797Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17926 613..1797 +
1691679255.7629817-CDS-H-elongata_contig17926:612..17971691679255.7629817-CDS-H-elongata_contig17926:612..1797Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17926 613..1797 +
1622930035.2405744-CDS-H-elongata_contig17926:2359..24311622930035.2405744-CDS-H-elongata_contig17926:2359..2431Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17926 2360..2431 +
1691679255.7765753-CDS-H-elongata_contig17926:2359..24311691679255.7765753-CDS-H-elongata_contig17926:2359..2431Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17926 2360..2431 +
1622930035.2559206-CDS-H-elongata_contig17926:2981..31311622930035.2559206-CDS-H-elongata_contig17926:2981..3131Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17926 2982..3131 +
1691679255.7867315-CDS-H-elongata_contig17926:2981..31311691679255.7867315-CDS-H-elongata_contig17926:2981..3131Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17926 2982..3131 +
1622930035.2674365-CDS-H-elongata_contig17926:3597..38221622930035.2674365-CDS-H-elongata_contig17926:3597..3822Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17926 3598..3822 +
1691679255.7990232-CDS-H-elongata_contig17926:3597..38221691679255.7990232-CDS-H-elongata_contig17926:3597..3822Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17926 3598..3822 +
1622930035.2801073-CDS-H-elongata_contig17926:4344..45361622930035.2801073-CDS-H-elongata_contig17926:4344..4536Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17926 4345..4536 +
1691679255.8093255-CDS-H-elongata_contig17926:4344..45361691679255.8093255-CDS-H-elongata_contig17926:4344..4536Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17926 4345..4536 +
1622930035.2929425-CDS-H-elongata_contig17926:6647..69501622930035.2929425-CDS-H-elongata_contig17926:6647..6950Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17926 6648..6950 +
1691679255.8199039-CDS-H-elongata_contig17926:6647..69501691679255.8199039-CDS-H-elongata_contig17926:6647..6950Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17926 6648..6950 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig17926.4749.1

>prot_H-elongata_contig17926.4749.1 ID=prot_H-elongata_contig17926.4749.1|Name=mRNA_H-elongata_contig17926.4749.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=709bp
KRRRIIDDDDDDDDPPILAPRAQPSPMATSKPSSGSSKHSSSTGMSGGGG
MNGTAKKKIIPGPSKARVTQGATGVMGPRAGNGGTVSSSHKSASKSASSG
YKKVYDDEEEEEASFGITPKKTSRDADRGPRGGVGGSTHGIPSKNGVRKD
GSSFKIPKRESASPRPVPPSGSPASRTSSVALSSRGSSGHGGNSSSSSSV
RKMGHADGNFERKLSKDPSRRRPEDSKRASNDKKFHHVDQARASEHRKRQ
LEKEERLREEERKKKRPKVPYGKGSTPTTPKTKVKAEPVRRVSSSSASSG
KARVPRTAAASAMKPRDTEKKFKEKTRKDRIEEAMKVYKWWEEPSLGHGK
QWDSLEHNGAYFAPEYQPHRVKLKYNGEDVNLTPRQEEIATFYASMPLDG
PQLKEQGDVFNRNFFEDFKAVLGKGHKIKKFELLDFSAMRRYLETAKQIK
RAATDREKAVTKIEKEELKHKYCYAIVDGHLEMVGNFTVEPPGLFRGRGK
HPKTGKVKARVMPSDIALNFGESVCVPQCNVPGYAWQHVQHDPSVTWLGK
WDGNLAGTKYMMLAASSSFKGKSDMAKYNKAMALKGNIDKIRTDYTKKLN
SANAQTKQIATAVWIIDQLALRVGGEKGDDEADTVGCCSLRREHLAFNPD
PNVHEIDLEFLGKDSMLFKQTIDFDKYGDVGMRVFNNLKGFCKKKHHSEE
LFDRLDPR*
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mRNA from alignment at H-elongata_contig17926:613..6950+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig17926.4749.1 ID=mRNA_H-elongata_contig17926.4749.1|Name=mRNA_H-elongata_contig17926.4749.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6338bp|location=Sequence derived from alignment at H-elongata_contig17926:613..6950+ (Himanthalia elongata Himel1 dioecious)
AAAAGAAGGCGAATAATAGACGATGATGACGACGACGATGATCCTCCGAT CCTTGCTCCGCGGGCACAACCCTCGCCCATGGCGACCTCGAAACCGTCAT CGGGCTCGAGCAAGCACAGCAGCTCGACTGGGATGAGCGGCGGCGGCGGG ATGAATGGCACCGCGAAGAAAAAGATTATACCGGGCCCGTCAAAGGCCAG AGTGACGCAAGGGGCAACCGGGGTGATGGGGCCTAGAGCAGGCAACGGTG GTACAGTATCATCTTCTCACAAGTCAGCTAGTAAGTCAGCAAGCTCGGGT TACAAGAAGGTTTACGATGACGAGGAGGAGGAAGAGGCCTCTTTCGGGAT AACTCCCAAGAAGACGTCACGGGACGCGGATAGGGGCCCGCGCGGCGGGG TTGGCGGCAGCACTCACGGGATTCCTTCAAAGAATGGAGTGAGGAAGGAC GGGTCGAGTTTCAAGATCCCAAAGCGAGAGAGCGCGTCTCCTCGACCGGT ACCGCCTTCGGGATCCCCCGCTTCGAGGACGTCCTCCGTGGCGCTCTCTT CAAGGGGAAGCAGCGGTCACGGTGGTAACAGCAGCAGCAGCAGCAGCGTG AGAAAGATGGGCCACGCGGATGGAAACTTCGAGCGTAAACTAAGCAAGGA TCCCAGTAGGAGGCGACCGGAGGACTCTAAGAGGGCTTCTAACGACAAGA AGTTCCATCATGTGGACCAGGCCAGGGCCTCGGAACACCGCAAGCGCCAG CTGGAGAAGGAAGAAAGACTTCGGGAAGAGGAGCGCAAGAAAAAGAGACC GAAGGTTCCCTACGGGAAGGGGTCGACGCCCACGACCCCGAAGACGAAGG TCAAGGCGGAGCCTGTGCGAAGGGTTTCTTCATCCTCCGCGTCCAGCGGA AAGGCACGGGTCCCTCGCACGGCGGCCGCGTCGGCGATGAAGCCTCGCGA CACAGAGAAAAAATTCAAGGAGAAGACACGAAAAGACAGGATTGAGGAGG CGATGAAGGTGTACAAATGGTGGGAGGAGCCCTCGCTGGGGCACGGGAAG CAATGGGATTCGCTGGAGCACAACGGTGCGTATTTTGCCCCAGAGTACCA GCCACATCGCGTGAAGCTCAAGTACAACGGGGAGGACGTGAATCTGACGC CGCGGCAGGAGGAGATCGCGACTTTCTACGCGAGCGTGAGTCCGGGGGGG AGGGATCGATCTTTATTTTCGCTGCCTCCCAACGCTAGGCGGGACGGGAG GATGCCGATTTTAAAGATAGTATAGTATCCTCTGCGTCATAGTTGTGGGT TGACAGGTTCTTGACAGTGTGTCAAGGCGTCTTTTTGGAAATATACTAGT TTTAGTTTAGGCCTTGACGCATCTGTCAAGGGGTTCAACTCTTGTCAACT GACAATTTTACTCTGCGCAAATCCTTCCACAGAGGTTTGCATCCTCTTGG AAGGCGAAAACAATTGCGTCCTCGGACACTTGCGAGCGTTCTTTTTCAGC GCGTGTGAAGACAGAAGACCGTCGTCAACGAAGAATGCATAAAACGAACG TGCTTCGTCCCAACGCGTGACCGGGAGCCCTTTCTCGTGCTCAGTCGTCG TAGTCGACATTGCCCTCGTACCGCAAGCGTTCGGCGTGTCTAGCACATGC TGACAGTATCAATGTACCTGAATATTTTCCATGGCTTTGTATTCGTCTGA TCTCTCTCTGCTTTCGCGCTAAACCCTGTCGATCGAACATTGGCCAGATG CCGCTAGACGGGCCGCAGCTAAAGGAGCAGGGCGACGTGTTTAACCGTAA CTTTTTCGAGGACTTCAAGGTAAGAAATGATAAGCAACCCGAGAACTAAC GGGCGATCGGGTGGGCATACGCGGTGCGGAATATATCCTTGAGAGACGAG AGGCGAGGCATCCGGGGTCTACTTTTATGGCAGCAGTAGAGAAAAAGAGG CACAGTGGTAGAGTGATCCTCCGCAATAGTTTTTGTGAGAGGGCGTTTCT CTGCTGACGCTCCATCGGGCGCGGCAGAGTATGTCACGTAACCGGGCGCG GAGCTTCAAAGGTTTCCTAAATATGTTAAGCGTTTTTGGCGTTTTTTGTT GCCTAGTACGAAGGGGCGACGTAGGAAACGGAATGAGCAATAACGTTCCA GGAGCGTTCGAAAGGATCTTACAAATTCCTCCACAACACATGCGCTAGAG GAAAGGCAGGTTGCGCATGCTGCATACAAGTCTTGCGACACGCCCGCGTG TCCAAGTCGCGTTTTTTACGGTGTAAAAGCCCGCCTCGAGCCCGAGCGTG CCACGCACCCGTGTTGTTAAGACGAGACAGCAGCGCACTACCAAACCCGA TTTCCCTCGAACGTAACAGGCGGTACTCGGCAAGGGGCACAAGATCAAGA AGTTTGAATTGCTTGACTTTTCGGCGATGCGACGTTACCTGGAGACGGCG AAGCAGATTAAGCGCGCTGCCACTGACAGGGAGAAGGCGGTCACAAAGAT AGAGAAAGAGGAGTTAAAGGTCAGTCATAGTTGAGTAGTTATGGGGAACC GGGTCAGCGTGGGGGAGTGATATGGAAAGCGTTTGTGGGCAGTCCTTGCG AAGTGACTGAAAGCAGCTCACTCGACGAAGTGATGTGAACGGCCCGGTCT CGGGGATGAATAAGATGCGGTCGGATCAAGCAGTGCCACAGAAGCGGAAA CGATCGACTCACGGGATATCGCCTGGTATGTACGGACAGTTGTGGATTTT AGCGGCGTATAAGCGTGCCTTGCTCCAAAGGCGCGCGTGCACACACACAC ACACACACACAATACTTGTCCTGCACATGCCGTTCCTCGTTTTCAGCTGC CGCAACCGCCCCTTCGGTCATACTCGATAGTGGATTCACTGGTTCACTAG ACGCTCCGTTCCCTACTCCTGATCCAACTCCCTTTCGTGTCTGTCCCGTC CCTTGCACTCGCCATGGCGTGCCTTGCGTGCACAGCACAAGTACTGTTAC GCCATTGTCGACGGGCACCTAGAGATGGTCGGTAACTTCACCGTGGAGCC TCCTGGGCTCTTCAGGGGTAGAGGAAAGCACCCCAAGACTGGCAAGGTTA AGGCCAGGGTGATGCCGTCCGACATCGCGCTCAACTTCGGCGAGTCCGTG TGCGTGCCGCAGTGCAACGTTCCAGGCTACGCTTGGCAACATGTTCAGCA TGACCCGTCGGTCAGTGTTCAAATAATGAGCGGGGGGGTTAAGGGGACGC GGGGGGGAAGAGAGGGGGCGCGTTTGATAAGGGGCGTGATATGCAATATT CGATGAGGTCCCGGGCAACCAACGGCGGTGCATATGATCCCCAAAAGATA AGGCATCGCATCATCTGGTGTGATGACCAAATAACATTTCGCGAACTAGG AACGCATTATGGTATGGTATGGTATGGTATGGTATGGTATACACCATTCT CGCCAGTTTCGTGTTGTTTCGGGCTATGGGGTGGAGGAAATCGGTATGGG CTCCTCTTTTTTTCCGAACCGTTCCGTCTGGAACCCAACCCCGTGTTATT TCCTTTCCAACAGGGGTACACTTTTCCTACCAAAATTCCGCCCGGTCTCG GCTTCACTCCCCTGTGACACTGGAGTTTGTCAACACTCCCACCCACCACG TCACAGACATCGCGCCTCCGCCTCCGCCTCCATCTCATTATGCTAACCCC CGTTACGCGATGCGTGTGTCTTGGTCAATCAGGTGACGTGGCTGGGGAAG TGGGATGGCAACCTCGCGGGCACAAAGTACATGATGCTTGCAGCGAGCTC GTCCTTCAAGGGGAAAAGCGACATGGCAAAGTACAACAAAGCCATGGCGC TAAAGGGAAACATTGACAAGATCCGCACGGACTACACAAAGAAGCTCAAC AGCGCGAACGCCCAGACCAAGCAGGTGTGGCTTGATGTACTTCTGGCTCA TTTATATCTCTATAATAGGGGAGTGGTCTGAAAGGAGTATACGGGTTCGT TGCGAAAAGGGGTATGAAAATGACTGCTCAACGCCAATCGTGGCCGATCA TCAACACCGGTGCGCCGCCAGACCTGAATGATCGCCGTCTTCAAATCGGC GAATAGTTCGCACGGACAGTAGACCCCCGCATCGCCACAGAGTGTTATTC TTAGCAGATGACAGGCATGCGCGCAGACAAGGCAAGCGTGTGACAGAATC TCGTTCGAGGCTTTTATCGCTGTGATGGCATTCGGCATCAAGCGTAAGGT AAAGGCTACCGAAGGCTGCTAGGCGCTCGTTCGGACTTGTTTGCAAACAG CCACGAAGGAGTGAAAAGGTGACGTGACAGAGGTGTTTTACGGAAACAAT GCAAATATGTTTCGGCGGCACTAGGTAAATGTATACACTACTACGTGACC ATTACGACGCCTCCCTTGATAAGAAAAGCTGTAGTCCCAGGGTAAACATA TACGGCAAAATGATTGGGCCTTCGCGGAGCGTCCACTAATCTTGCCGTTT CCTTTCTGGAACTTTGGCTTGACTATCAAGGACGGCGTTGTAATGGCCTT GTTGGAGTGAAATAATGTACAGTATCTACCTCGATTCCAAGCACTCTTGA ACTCGCAGTCTTCGCGCCGCCCGAACATATTTGCGGGTGTCTGTAAAAAC GCCTCTTCCGCGTCACCTTTCGGTCCTTCGTGGCTGATTGCAAAAAAGCC CGAATGAGCGCCTGGCACGCTGGGGTGGTCTTCGCCTTCCTCCTGATACT TCAACAATGGCATCATCACGATGATAGAAGCTTTGAACGATATCTTGTCA CACGATTGTTTGCGCATGCTGATCTCTGGCATCTGTGAAGAAGGAATGCT CTGCGGTCATGATATATACAGTCTTATGCGAACTTATCGCGGATTTGAAG GCGAATGTTCAGCTCTGACAGCGCACCAGTTTTGGTGGTCGGCAAGTATC AGCCATTTTGAGGGAATATATATATGTGCTATACTCTTGCGAAGGCTTCC AAGGCCGTTACGCTTTAAGTGGGACACGAGCGCGATGCAGCTGAGATGTT CGTCTAAGGGGGCCAATAATAATGGCCAAAAGGGGGTCAGGTAGTCGTGG AGCTGCTGAATAGAATAGCCCACTTGGTAGTACCTCCCCCCTCAGGGTAA AAACTTTGATCGATCTTATTAAAGAATCAGGTGTAAAAACTTTGTTGGAT AGTGCGACAGACCGGTCGGTCGGTCTTTGACAAGAGCGACCCGTAAAGGG GTCGATGTTTGCTTTTCGCCCCAAGATTTTTTTTTCTGTAACAATTAAAG CAGCACTCGACCCACAGTTTTTACCCACGGTTAGAGTGTTCTGTGCAATT TCCCCGAAAACAAGCAAAAATCGTCACTGCGCGTACGCACGCTCGAAGCA AAAATAAACATGTATGTGCAGTGCACTATTGCAATATATCCCCCCCCCCC CCCCCGAGTACCAACGACAAAGTTGTCGCCCGATTAGTCAACTGCTAGTA TTTCGGAATTCGGGAGTTGGATCCTAAAATGATTCGTTATTTTATGGCTC CTGTGGCGGAAACTGTTAGAGCAGGGAGTAAAGTTTGACGAGGTGTAGGA ATGCGGAACTTGGATTGGCGATCTTTTAAAGTTATTGGATTGGCGAAAAC CGGGAAGAAATGGGCGTACTGGTATATATTCTTTTGGGGAGGGATGGTGG TAACCTAGCACATGAAATGAAAGCCCAATCGGTCGGAAGATATCCACACG GAGATACACACTGCAATACTCCCCGAGATCGCCGCTGGACAAGGTGCAAT ACCCCCCACCCCCGAAAAGCGAGATGCGCACCATCCCCTCTATCTCACAG GGTTGTCGAGTCAAGTGTTTGTCGAATTCAGCGTATTTTGATTCGAACTA TAATTTTTTCTAATAATAATATATTGCGGTAAATTATGTACATTAGCCTG ACGTTTCGACCAAGCCCGCCGACCGTGTCCTCGCCGCGCCCTCTATGTAT CCTCTCCCGCCTCCGCTGGATGGCGCTGCTGTCAGATCGCGACCGCGGTG TGGATCATCGACCAGCTGGCCCTCCGTGTCGGCGGAGAAAAAGGCGACGA CGAGGCGGACACCGTCGGTTGCTGCTCCCTCCGGAGAGAGCACCTCGCCT TCAACCCGGACCCTAACGTGCACGAGATCGACCTGGAGTTCTTGGGCAAG GATTCCATGCTGTTCAAGCAGACGATCGACTTCGACAAATACGGGGACGT AGGGATGCGGGTTTTCAACAACCTTAAGGGCTTCTGCAAGAAGAAGCACC ACTCGGAGGAGCTATTCGATCGCCTCGACCCCAGGTAA
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Coding sequence (CDS) from alignment at H-elongata_contig17926:613..6950+

>mRNA_H-elongata_contig17926.4749.1 ID=mRNA_H-elongata_contig17926.4749.1|Name=mRNA_H-elongata_contig17926.4749.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4254bp|location=Sequence derived from alignment at H-elongata_contig17926:613..6950+ (Himanthalia elongata Himel1 dioecious)
AAAAGAAGGCGAATAATAGACGATGATGACGACGACGATGATCCTCCGAT
CCTTGCTCCGCGGGCACAACCCTCGCCCATGGCGACCTCGAAACCGTCAT
CGGGCTCGAGCAAGCACAGCAGCTCGACTGGGATGAGCGGCGGCGGCGGG
ATGAATGGCACCGCGAAGAAAAAGATTATACCGGGCCCGTCAAAGGCCAG
AGTGACGCAAGGGGCAACCGGGGTGATGGGGCCTAGAGCAGGCAACGGTG
GTACAGTATCATCTTCTCACAAGTCAGCTAGTAAGTCAGCAAGCTCGGGT
TACAAGAAGGTTTACGATGACGAGGAGGAGGAAGAGGCCTCTTTCGGGAT
AACTCCCAAGAAGACGTCACGGGACGCGGATAGGGGCCCGCGCGGCGGGG
TTGGCGGCAGCACTCACGGGATTCCTTCAAAGAATGGAGTGAGGAAGGAC
GGGTCGAGTTTCAAGATCCCAAAGCGAGAGAGCGCGTCTCCTCGACCGGT
ACCGCCTTCGGGATCCCCCGCTTCGAGGACGTCCTCCGTGGCGCTCTCTT
CAAGGGGAAGCAGCGGTCACGGTGGTAACAGCAGCAGCAGCAGCAGCGTG
AGAAAGATGGGCCACGCGGATGGAAACTTCGAGCGTAAACTAAGCAAGGA
TCCCAGTAGGAGGCGACCGGAGGACTCTAAGAGGGCTTCTAACGACAAGA
AGTTCCATCATGTGGACCAGGCCAGGGCCTCGGAACACCGCAAGCGCCAG
CTGGAGAAGGAAGAAAGACTTCGGGAAGAGGAGCGCAAGAAAAAGAGACC
GAAGGTTCCCTACGGGAAGGGGTCGACGCCCACGACCCCGAAGACGAAGG
TCAAGGCGGAGCCTGTGCGAAGGGTTTCTTCATCCTCCGCGTCCAGCGGA
AAGGCACGGGTCCCTCGCACGGCGGCCGCGTCGGCGATGAAGCCTCGCGA
CACAGAGAAAAAATTCAAGGAGAAGACACGAAAAGACAGGATTGAGGAGG
CGATGAAGGTGTACAAATGGTGGGAGGAGCCCTCGCTGGGGCACGGGAAG
CAATGGGATTCGCTGGAGCACAACGGTGCGTATTTTGCCCCAGAGTACCA
GCCACATCGCGTGAAGCTCAAGTACAACGGGGAGGACGTGAATCTGACGC
CGCGGCAGGAGGAGATCGCGACTTTCTACGCGAGCAAAAGAAGGCGAATA
ATAGACGATGATGACGACGACGATGATCCTCCGATCCTTGCTCCGCGGGC
ACAACCCTCGCCCATGGCGACCTCGAAACCGTCATCGGGCTCGAGCAAGC
ACAGCAGCTCGACTGGGATGAGCGGCGGCGGCGGGATGAATGGCACCGCG
AAGAAAAAGATTATACCGGGCCCGTCAAAGGCCAGAGTGACGCAAGGGGC
AACCGGGGTGATGGGGCCTAGAGCAGGCAACGGTGGTACAGTATCATCTT
CTCACAAGTCAGCTAGTAAGTCAGCAAGCTCGGGTTACAAGAAGGTTTAC
GATGACGAGGAGGAGGAAGAGGCCTCTTTCGGGATAACTCCCAAGAAGAC
GTCACGGGACGCGGATAGGGGCCCGCGCGGCGGGGTTGGCGGCAGCACTC
ACGGGATTCCTTCAAAGAATGGAGTGAGGAAGGACGGGTCGAGTTTCAAG
ATCCCAAAGCGAGAGAGCGCGTCTCCTCGACCGGTACCGCCTTCGGGATC
CCCCGCTTCGAGGACGTCCTCCGTGGCGCTCTCTTCAAGGGGAAGCAGCG
GTCACGGTGGTAACAGCAGCAGCAGCAGCAGCGTGAGAAAGATGGGCCAC
GCGGATGGAAACTTCGAGCGTAAACTAAGCAAGGATCCCAGTAGGAGGCG
ACCGGAGGACTCTAAGAGGGCTTCTAACGACAAGAAGTTCCATCATGTGG
ACCAGGCCAGGGCCTCGGAACACCGCAAGCGCCAGCTGGAGAAGGAAGAA
AGACTTCGGGAAGAGGAGCGCAAGAAAAAGAGACCGAAGGTTCCCTACGG
GAAGGGGTCGACGCCCACGACCCCGAAGACGAAGGTCAAGGCGGAGCCTG
TGCGAAGGGTTTCTTCATCCTCCGCGTCCAGCGGAAAGGCACGGGTCCCT
CGCACGGCGGCCGCGTCGGCGATGAAGCCTCGCGACACAGAGAAAAAATT
CAAGGAGAAGACACGAAAAGACAGGATTGAGGAGGCGATGAAGGTGTACA
AATGGTGGGAGGAGCCCTCGCTGGGGCACGGGAAGCAATGGGATTCGCTG
GAGCACAACGGTGCGTATTTTGCCCCAGAGTACCAGCCACATCGCGTGAA
GCTCAAGTACAACGGGGAGGACGTGAATCTGACGCCGCGGCAGGAGGAGA
TCGCGACTTTCTACGCGAGCATGCCGCTAGACGGGCCGCAGCTAAAGGAG
CAGGGCGACGTGTTTAACCGTAACTTTTTCGAGGACTTCAAGATGCCGCT
AGACGGGCCGCAGCTAAAGGAGCAGGGCGACGTGTTTAACCGTAACTTTT
TCGAGGACTTCAAGGCGGTACTCGGCAAGGGGCACAAGATCAAGAAGTTT
GAATTGCTTGACTTTTCGGCGATGCGACGTTACCTGGAGACGGCGAAGCA
GATTAAGCGCGCTGCCACTGACAGGGAGAAGGCGGTCACAAAGATAGAGA
AAGAGGAGTTAAAGGCGGTACTCGGCAAGGGGCACAAGATCAAGAAGTTT
GAATTGCTTGACTTTTCGGCGATGCGACGTTACCTGGAGACGGCGAAGCA
GATTAAGCGCGCTGCCACTGACAGGGAGAAGGCGGTCACAAAGATAGAGA
AAGAGGAGTTAAAGCACAAGTACTGTTACGCCATTGTCGACGGGCACCTA
GAGATGGTCGGTAACTTCACCGTGGAGCCTCCTGGGCTCTTCAGGGGTAG
AGGAAAGCACCCCAAGACTGGCAAGGTTAAGGCCAGGGTGATGCCGTCCG
ACATCGCGCTCAACTTCGGCGAGTCCGTGTGCGTGCCGCAGTGCAACGTT
CCAGGCTACGCTTGGCAACATGTTCAGCATGACCCGTCGCACAAGTACTG
TTACGCCATTGTCGACGGGCACCTAGAGATGGTCGGTAACTTCACCGTGG
AGCCTCCTGGGCTCTTCAGGGGTAGAGGAAAGCACCCCAAGACTGGCAAG
GTTAAGGCCAGGGTGATGCCGTCCGACATCGCGCTCAACTTCGGCGAGTC
CGTGTGCGTGCCGCAGTGCAACGTTCCAGGCTACGCTTGGCAACATGTTC
AGCATGACCCGTCGGTGACGTGGCTGGGGAAGTGGGATGGCAACCTCGCG
GGCACAAAGTACATGATGCTTGCAGCGAGCTCGTCCTTCAAGGGGAAAAG
CGACATGGCAAAGTACAACAAAGCCATGGCGCTAAAGGGAAACATTGACA
AGATCCGCACGGACTACACAAAGAAGCTCAACAGCGCGAACGCCCAGACC
AAGCAGGTGACGTGGCTGGGGAAGTGGGATGGCAACCTCGCGGGCACAAA
GTACATGATGCTTGCAGCGAGCTCGTCCTTCAAGGGGAAAAGCGACATGG
CAAAGTACAACAAAGCCATGGCGCTAAAGGGAAACATTGACAAGATCCGC
ACGGACTACACAAAGAAGCTCAACAGCGCGAACGCCCAGACCAAGCAGAT
CGCGACCGCGGTGTGGATCATCGACCAGCTGGCCCTCCGTGTCGGCGGAG
AAAAAGGCGACGACGAGGCGGACACCGTCGGTTGCTGCTCCCTCCGGAGA
GAGCACCTCGCCTTCAACCCGGACCCTAACGTGCACGAGATCGACCTGGA
GTTCTTGGGCAAGGATTCCATGCTGTTCAAGCAGACGATCGACTTCGACA
AATACGGGGACGTAGGGATGCGGGTTTTCAACAACCTTAAGGGCTTCTGC
AAGAAGAAGCACCACTCGGAGGAGCTATTCGATCGCCTCGACCCCAGGTA
AATCGCGACCGCGGTGTGGATCATCGACCAGCTGGCCCTCCGTGTCGGCG
GAGAAAAAGGCGACGACGAGGCGGACACCGTCGGTTGCTGCTCCCTCCGG
AGAGAGCACCTCGCCTTCAACCCGGACCCTAACGTGCACGAGATCGACCT
GGAGTTCTTGGGCAAGGATTCCATGCTGTTCAAGCAGACGATCGACTTCG
ACAAATACGGGGACGTAGGGATGCGGGTTTTCAACAACCTTAAGGGCTTC
TGCAAGAAGAAGCACCACTCGGAGGAGCTATTCGATCGCCTCGACCCCAG
GTAA
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