prot_H-elongata_contig179092.4738.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig179092.4738.1
Unique Nameprot_H-elongata_contig179092.4738.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length124
Homology
[Close]
BLAST of mRNA_H-elongata_contig179092.4738.1 vs. uniprot
Match: D7FWI9_ECTSI (Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7FWI9_ECTSI)

HSP 1 Score: 207 bits (527), Expect = 3.260e-67
Identity = 108/123 (87.80%), Postives = 117/123 (95.12%), Query Frame = 0 
Query:    1 MTGKGKGGRGDKKAKSRSSKAGLRFPVGRIGRFLKTGKYSQRVGTGAPVYLAAVMEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVVKK 123
            M+GKGKGGRG KK+ +RS+KAGL+FPVGR+GRFLK GKY+ RVG GAPVYLAAV+EYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK VKK
Sbjct:    1 MSGKGKGGRG-KKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVKK 122
[Close]
BLAST of mRNA_H-elongata_contig179092.4738.1 vs. uniprot
Match: D7G193_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G193_ECTSI)

HSP 1 Score: 205 bits (522), Expect = 1.100e-65
Identity = 107/122 (87.70%), Postives = 116/122 (95.08%), Query Frame = 0 
Query:    1 MTGKGKGGRGDKKAKSRSSKAGLRFPVGRIGRFLKTGKYSQRVGTGAPVYLAAVMEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVVK 122
            M+GKGKGGRG KK+ +RS+KAGL+FPVGR+GRFLK GKY+ RVG GAPVYLAAV+EYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK VK
Sbjct:   46 MSGKGKGGRG-KKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK 166
[Close]
BLAST of mRNA_H-elongata_contig179092.4738.1 vs. uniprot
Match: A0A6H5KG79_9PHAE (Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG79_9PHAE)

HSP 1 Score: 200 bits (508), Expect = 3.920e-64
Identity = 105/119 (88.24%), Postives = 113/119 (94.96%), Query Frame = 0 
Query:    1 MTGKGKGGRGDKKAKSRSSKAGLRFPVGRIGRFLKTGKYSQRVGTGAPVYLAAVMEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 119
            M+GKGKGGRG KK+ S+SSKAGL+FPV RIGR+LK GKY+ RVG GAPVYLAAV+EYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK
Sbjct:    1 MSGKGKGGRG-KKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 118
[Close]
BLAST of mRNA_H-elongata_contig179092.4738.1 vs. uniprot
Match: A0A835ZLE9_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLE9_9STRA)

HSP 1 Score: 200 bits (508), Expect = 4.610e-64
Identity = 101/121 (83.47%), Postives = 114/121 (94.21%), Query Frame = 0 
Query:    3 GKGKGGRGDKKAKSRSSKAGLRFPVGRIGRFLKTGKYSQRVGTGAPVYLAAVMEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVVKK 123
            GKGKGGRGDKKA S+S+KAGL+FPVGR+GRFLK G+Y++RVG GAPVY+AAVMEYL AEVLEL+GNAARDNKK+RI+PRHIQLAVRNDEELNKLLG+VTIA+GGVLPNIHAVLLPKK   K
Sbjct:    5 GKGKGGRGDKKAVSKSAKAGLQFPVGRVGRFLKQGRYAKRVGAGAPVYMAAVMEYLCAEVLELSGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGKVTIAAGGVLPNIHAVLLPKKTRSK 125
[Close]
BLAST of mRNA_H-elongata_contig179092.4738.1 vs. uniprot
Match: D8LLP0_ECTSI (Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLP0_ECTSI)

HSP 1 Score: 198 bits (504), Expect = 9.500e-64
Identity = 104/119 (87.39%), Postives = 112/119 (94.12%), Query Frame = 0 
Query:    1 MTGKGKGGRGDKKAKSRSSKAGLRFPVGRIGRFLKTGKYSQRVGTGAPVYLAAVMEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 119
            M+GKGKGGRG KK  SRS+KAGL+FPVGRIGRF+K GKYS RVG GAPVY+AAV+EYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELN+LLG+ TIASGGVLPNIHAVLLPKK
Sbjct:    1 MSGKGKGGRG-KKITSRSAKAGLQFPVGRIGRFIKQGKYSSRVGGGAPVYMAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNRLLGDATIASGGVLPNIHAVLLPKK 118
[Close]
BLAST of mRNA_H-elongata_contig179092.4738.1 vs. uniprot
Match: D7FVQ5_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ5_ECTSI)

HSP 1 Score: 200 bits (508), Expect = 1.990e-63
Identity = 105/119 (88.24%), Postives = 113/119 (94.96%), Query Frame = 0 
Query:    1 MTGKGKGGRGDKKAKSRSSKAGLRFPVGRIGRFLKTGKYSQRVGTGAPVYLAAVMEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 119
            M+GKGKGGRG KK+ S+SSKAGL+FPV RIGR+LK GKY+ RVG GAPVYLAAV+EYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK
Sbjct:   52 MSGKGKGGRG-KKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 169
[Close]
BLAST of mRNA_H-elongata_contig179092.4738.1 vs. uniprot
Match: A0A836CG77_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG77_9STRA)

HSP 1 Score: 194 bits (492), Expect = 8.850e-62
Identity = 101/121 (83.47%), Postives = 111/121 (91.74%), Query Frame = 0 
Query:    1 MTGKGKGGRGD--KKAKSRSSKAGLRFPVGRIGRFLKTGKYSQRVGTGAPVYLAAVMEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 119
            M GKGKGGRG   KK+ S+SSKAGL+FPV R+GRFLK G+Y++RVG GAPVYLAAV+EYL AE+LELAGNAARDNKK+RIVPRHIQLAVRNDEELNKLLG VTIASGGVLPNIHAVLLPKK
Sbjct:    1 MAGKGKGGRGAEAKKSTSKSSKAGLQFPVARLGRFLKVGRYAERVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHIQLAVRNDEELNKLLGNVTIASGGVLPNIHAVLLPKK 121
[Close]
BLAST of mRNA_H-elongata_contig179092.4738.1 vs. uniprot
Match: A0A448ZH28_9STRA (Histone H2A n=12 Tax=Bacillariophyta TaxID=2836 RepID=A0A448ZH28_9STRA)

HSP 1 Score: 192 bits (487), Expect = 4.080e-61
Identity = 96/119 (80.67%), Postives = 111/119 (93.28%), Query Frame = 0 
Query:    1 MTGKGKGGRGDKKAKSRSSKAGLRFPVGRIGRFLKTGKYSQRVGTGAPVYLAAVMEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 119
            M+GKGKGGRG+KK+ + S+KAGL+FPVGRIGR+L+ GKY+ R+G GAPVYLAAV+EYL AE+LELAGNAARDNKK+RIVPRHI LAV+NDEELNKLLG VTIASGGVLPNIHA+LLPKK
Sbjct:    1 MSGKGKGGRGEKKSTTASAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAILLPKK 119
[Close]
BLAST of mRNA_H-elongata_contig179092.4738.1 vs. uniprot
Match: A0A6U2JFS4_9STRA (Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 RepID=A0A6U2JFS4_9STRA)

HSP 1 Score: 192 bits (487), Expect = 4.080e-61
Identity = 98/122 (80.33%), Postives = 111/122 (90.98%), Query Frame = 0 
Query:    1 MTGKGKGGRGDKKAKSRSSKAGLRFPVGRIGRFLKTGKYSQRVGTGAPVYLAAVMEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVVK 122
            M+GKGKGGRG KK+ + S+KAGL+FPVGRIGR+L+ GKY+ R+G GAPVYLAAV+EYL AE+LELAGNAARDNKK+RIVPRHI LAV+NDEELNKLLG VTIASGGVLPNIHAVLLPKK  K
Sbjct:    1 MSGKGKGGRGGKKSTTSSAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAVLLPKKSAK 122
[Close]
BLAST of mRNA_H-elongata_contig179092.4738.1 vs. uniprot
Match: H2A_CHLRE (Histone H2A n=45 Tax=Chlamydomonadales TaxID=3042 RepID=H2A_CHLRE)

HSP 1 Score: 192 bits (487), Expect = 5.120e-61
Identity = 99/119 (83.19%), Postives = 108/119 (90.76%), Query Frame = 0 
Query:    1 MTGKGKGGRGDKKAKSRSSKAGLRFPVGRIGRFLKTGKYSQRVGTGAPVYLAAVMEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 119
            M G+GKG    KKA SRS+KAGL+FPVGRI R+LK GKY++R+G GAPVYLAAV+EYLTAEVLELAGNAARDNKK RIVPRHIQLA+RNDEEL KLLGEVTIASGGVLPNIHAVLLPKK
Sbjct:    1 MAGRGKGKTSGKKAVSRSAKAGLQFPVGRIARYLKKGKYAERIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKNRIVPRHIQLAIRNDEELGKLLGEVTIASGGVLPNIHAVLLPKK 119
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig179092.4738.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWI9_ECTSI3.260e-6787.80Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
D7G193_ECTSI1.100e-6587.70Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5KG79_9PHAE3.920e-6488.24Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A835ZLE9_9STRA4.610e-6483.47Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R... [more]
D8LLP0_ECTSI9.500e-6487.39Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8... [more]
D7FVQ5_ECTSI1.990e-6388.24Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A836CG77_9STRA8.850e-6283.47Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R... [more]
A0A448ZH28_9STRA4.080e-6180.67Histone H2A n=12 Tax=Bacillariophyta TaxID=2836 Re... [more]
A0A6U2JFS4_9STRA4.080e-6180.33Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 Rep... [more]
H2A_CHLRE5.120e-6183.19Histone H2A n=45 Tax=Chlamydomonadales TaxID=3042 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 42..57
score: 81.37
coord: 57..70
score: 90.54
coord: 99..117
score: 76.04
coord: 13..35
score: 70.77
coord: 71..85
score: 74.98
IPR002119Histone H2ASMARTSM00414h2a4coord: 3..122
e-value: 2.3E-75
score: 266.4
IPR032454Histone H2A, C-terminal domainPFAMPF16211Histone_H2A_Ccoord: 91..123
e-value: 1.7E-18
score: 66.1
IPR009072Histone-foldGENE3D1.10.20.10coord: 2..123
e-value: 1.1E-60
score: 205.0
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 3..122
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 9..88
e-value: 1.3E-15
score: 57.9
NoneNo IPR availablePANTHERPTHR23430HISTONE H2Acoord: 2..121
NoneNo IPR availablePANTHERPTHR23430:SF233HISTONE H2A.6-RELATEDcoord: 2..121
IPR032458Histone H2A conserved sitePROSITEPS00046HISTONE_H2Acoord: 21..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig179092contigH-elongata_contig179092:734..1105 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig179092.4738.1mRNA_H-elongata_contig179092.4738.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig179092 734..1105 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig179092.4738.1 ID=prot_H-elongata_contig179092.4738.1|Name=mRNA_H-elongata_contig179092.4738.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=124bp
MTGKGKGGRGDKKAKSRSSKAGLRFPVGRIGRFLKTGKYSQRVGTGAPVY
LAAVMEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEV
TIASGGVLPNIHAVLLPKKVVKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002119Histone_H2A
IPR032454Histone_H2A_C
IPR009072Histone-fold
IPR007125Histone_H2A/H2B/H3
IPR032458Histone_H2A_CS