prot_H-elongata_contig179052.4737.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig179052.4737.1 vs. uniprot
Match: A0A6H5L5H7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5H7_9PHAE) HSP 1 Score: 342 bits (877), Expect = 8.370e-106 Identity = 185/294 (62.93%), Postives = 219/294 (74.49%), Query Frame = 0
Query: 1 MLGALNRLKRHKSPGSDGIPADVYKLAIGDE--ISPMGKALMAVVG-----QVIPDVWMESTVVSIPKKGDLTDMNNYRGISLMGTGLKVLMVLISLRLSAAMEREGLFSPAQAGFRRQEECATQVACLLEITKRRKIRGKPSYLAFVDLKKAYDTVPHEALLAKLDYYGVRGRMLGFIWALYANRKIAVRCRGGMSDPVALARGVRQGCPLSPLLFNIFINDVLDGAAELGIP-VGAAGEVI--VSGLLFADDLVCTVPTRRKLVGMMEHLTTWLEENEMQVGIKKCGVTVVG 284
M+ AL R+KRHKSPG+DG+PAD +LA G+E SPMGK ++ ++ +VIP ESTVV IPKKGD+TDMNN+RGISLM T LKVL+++IS RL++A ER LFS +QAGFR +EEC TQ ACLLEI +RRK R K +YL FVDLKKAYDTVP EAL AKL +YGVRG ML FI ALYAN KIAVR +SD +L RGVRQGCPLSP+LFNIFIND+LDGA LG+P VG E + GLLFADDLV PTR KL M +H++ W+ ENEM GI KCGV +G
Sbjct: 505 MVEALARIKRHKSPGNDGVPADFLELAGGEEGSQSPMGKTVLGMLNLIWKTRVIPTDRRESTVVPIPKKGDMTDMNNHRGISLMNTVLKVLVMIISTRLNSAFERHKLFSQSQAGFRTREECVTQAACLLEICQRRKFRRKSAYLMFVDLKKAYDTVPQEALFAKLVFYGVRGEMLAFIRALYANSKIAVRTGDLLSDSFSLERGVRQGCPLSPVLFNIFINDILDGAESLGVPEVGNQLERAPRIPGLLFADDLVTISPTRAKLAAMDDHISVWMAENEMSAGIHKCGVMAIG 798
BLAST of mRNA_H-elongata_contig179052.4737.1 vs. uniprot
Match: A0A7S1SJ55_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SJ55_9CHLO) HSP 1 Score: 245 bits (625), Expect = 1.410e-70 Identity = 132/297 (44.44%), Postives = 180/297 (60.61%), Query Frame = 0
Query: 4 ALNRLKRHKSPGSDGIPADVYKLAIGDEISPMGKALMAVVGQV-----IPDVWMESTVVSIPKKGDLTDMNNYRGISLMGTGLKVLMVLISLRLSAAMEREGLFSPAQAGFRRQEECATQVACLLEITKRRKIRGKPSYLAFVDLKKAYDTVPHEALLAKLDYYGVRGRMLGFIWALYANRKIAVR---CRGGMSDPVALARGVRQGCPLSPLLFNIFINDVLDGAAELGIPVGAAGEVI-------VSGLLFADDLVCTVPTRRKLVGMMEHLTTWLEENEMQVGIKKCGVTVVGK 285
AL RL +K+ G DGI A+ KLAI SP GK+L+ ++ + +P W S VVSI KKGD+T M+NYRGIS+MG +K+LM +++ RL + L Q GF EEC QVA + +I RR+ G P+Y F+DL+KAYDT+PHE L +KL+ G+ G ML F+ ALY + + V+ G +SDP+ + RG+RQGCP SP+LFNIFIND+ DG LG V +++ V G LFADD V P+ L M H + W E++ M G+KKCGV +G+
Sbjct: 405 ALKRLNNNKASGVDGITAETLKLAIYAPDSPFGKSLLELMNNIWTTKCVPKQWCSSAVVSILKKGDVTVMDNYRGISIMGALIKLLMTVVTQRLQDVCQTNKLIRRWQGGFMPGEECPLQVASIFDIAGRRQALGLPTYAGFIDLRKAYDTIPHELLFSKLEANGITGHMLSFLKALYRDSTVQVKTGEAPGILSDPIPIERGLRQGCPASPILFNIFINDIFDGIEGLGCEVPGCVDMLDSRQPLRVPGQLFADDTVGLAPSLDNLHAMFAHFSQWAEDHYMGFGVKKCGVMALGR 701
BLAST of mRNA_H-elongata_contig179052.4737.1 vs. uniprot
Match: L7JX89_TRAHO (RNA-directed DNA polymerase, Non LTR Retrotransposon (Fragment) n=1 Tax=Trachipleistophora hominis TaxID=72359 RepID=L7JX89_TRAHO) HSP 1 Score: 222 bits (565), Expect = 7.490e-63 Identity = 122/289 (42.21%), Postives = 171/289 (59.17%), Query Frame = 0
Query: 1 MLGALNRLKRHKSPGSDGIPADVYKLAIGDEI--SPMGKALMAVVGQV-----IPDVWMESTVVSIPKKGDLTDMNNYRGISLMGTGLKVLMVLISLRLSAAMEREGLFSPAQAGFRRQEECATQVACLLEITKRRKIRGKPSYLAFVDLKKAYDTVPHEALLAKLDYYGVRGRMLGFIWALYANRKIAVRCRGGMSDPVALARGVRQGCPLSPLLFNIFINDVLDGAAELGIPVGAAGEVIVSGLLFADDLVCTVPTRRKLVGMMEHLTTWLEENEMQVGIKKCGVTV 282
+L AL + K+ G+DGIP + YK+ D+ SP G + ++ ++ +P+ W E+ +V +PKKGDL +M+NYRGISL+ T K ++ +I+ +L+ + QAGFR+ EEC Q C EI KRR ++GKP+ F+D KKAYD VPHE L AKL YG GR+L F+ LY N K +VR SD GV+QGCP SP LFN++IN++L+G +GI G V GLLFADD V + +V ME L W ++ +M + I KCG+ V
Sbjct: 216 VLRALEHSSKGKATGTDGIPIEFYKVLQRDKNRESPFGNFVFQLITEIYAQAKVPEQWNEAMIVPVPKKGDLHNMDNYRGISLINTLCKEVVKIITEKLNRICTTNKILRDEQAGFRKLEECIAQTTCFYEIVKRRSLKGKPTMALFLDFKKAYDKVPHEGLFAKLRGYGFSGRILDFLIELYRNPKASVRIGDERSDTFNYQMGVKQGCPASPTLFNLYINNILEGITGVGIGNGEQ----VPGLLFADDAVVFAESYDDMVHNMEILEDWCDKWKMDLNISKCGLMV 500
BLAST of mRNA_H-elongata_contig179052.4737.1 vs. uniprot
Match: A0A1R1Y7R2_9FUNG (Putative RNA-directed DNA polymerase from transposon BS n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1Y7R2_9FUNG) HSP 1 Score: 220 bits (560), Expect = 1.460e-61 Identity = 128/308 (41.56%), Postives = 180/308 (58.44%), Query Frame = 0
Query: 1 MLGALNRLKRHKSPGSDGIPADVYKLAIGDE--ISPMGKALMAVV-----GQVIPDVWMESTVVSIPKKGDLTDMNNYRGISLMGTGLKVLMVLISLRLSAAMEREGLFSPAQAGFRRQEECATQVACLLEITKRRKIRGKPSYLAFVDLKKAYDTVPHEALLAKLDYYGVRGRMLGFIWALYANRKIAVRCRGGMSDPVALARGVRQGCPLSPLLFNIFINDVLDGAAELGIPVGAAGEVIVSGLLFADDLVCTVPTRRKLVGMMEHLTTWLEENEMQVGIKKCGV-----------TVVGKKMTAV 290
+ AL +KSPGSDGIP++V+K+ ++ SP+ K ++ ++ + IP S V+ IPKKGD+ D NNYRGISL+ T KVL +I+ RL + + + QAGFR +EEC Q L E+ +RRKI G +++ F+D KAYD VPHEALL K+ G+ G++ I ALY + K+ VR +S V GVRQGCP SP+LF+I+IND+LDG + IP E + GLLFADD V + +L +E LT W ++ EMQ+ KCG+ T++GK +T V
Sbjct: 398 ICAALKSTPNNKSPGSDGIPSEVWKMVQYEDEPTSPLAKLILRLITGIWDAEKIPKQLDPSVVIPIPKKGDIRDPNNYRGISLIPTLSKVLSKIIARRLCKIDNKYSILAKEQAGFRTREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHEALLRKIKTAGIGGKLYRVIEALYRSPKMCVRVGDRLSKTVDYNCGVRQGCPASPMLFDIYINDLLDGIKGVKIP---GIEECIPGLLFADDAVVLAESPAELQIALEKLTAWSQKWEMQINQDKCGIMGINSSTGMLFTIMGKPITQV 702
BLAST of mRNA_H-elongata_contig179052.4737.1 vs. uniprot
Match: A0A1R1X7T5_9FUNG (RNA-directed DNA polymerase from mobile element jockey n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1X7T5_9FUNG) HSP 1 Score: 220 bits (561), Expect = 1.680e-61 Identity = 123/285 (43.16%), Postives = 176/285 (61.75%), Query Frame = 0
Query: 4 ALNRLKRHKSPGSDGIPADVYKLAIGDEI---SPMGKALMAVVGQV-----IPDVWMESTVVSIPKKGDLTDMNNYRGISLMGTGLKVLMVLISLRLSAAMEREGLFSPAQAGFRRQEECATQVACLLEITKRRKIRGKPSYLAFVDLKKAYDTVPHEALLAKLDYYGVRGRMLGFIWALYANRKIAVRCRGGMSDPVALARGVRQGCPLSPLLFNIFINDVLDGAAELGIPVGAAGEVIVSGLLFADDLVCTVPTRRKLVGMMEHLTTWLEENEMQVGIKKCGV 280
AL +KSPGSDGIP++V+KL + +EI SP+ K + ++ ++ +P S VV IPKKGD+ D NNYRGISL+ T KV+ +++ RL A + + + QAGFR +EEC Q L E+ +RRKI G +++ F+D KAYD VPH+ALL K+ G+ ++ I ALY + K+ VR G +S V GVRQGCP SPLLF+I+IND+L G + IP E ++SGLLFADD V + +L +E ++ W ++ EMQ+ +KCG+
Sbjct: 639 ALKTTPNNKSPGSDGIPSEVWKL-VQNEIEPTSPLAKVISKIINRIWDSENMPKQMDPSVVVPIPKKGDMRDPNNYRGISLIPTLAKVISKIVARRLCAIDNKYEILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKTAGIGSKLYRIIEALYRSPKMCVRVGGKLSKLVEYNCGVRQGCPASPLLFDIYINDLLHGLKGVEIP---GTEAMISGLLFADDAVVLAESPAELQIALEKISAWSQKWEMQINQEKCGI 919
BLAST of mRNA_H-elongata_contig179052.4737.1 vs. uniprot
Match: A0A1R1YP44_9FUNG (LINE-1 retrotransposable element ORF2 protein (Fragment) n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YP44_9FUNG) HSP 1 Score: 220 bits (561), Expect = 1.820e-61 Identity = 128/287 (44.60%), Postives = 171/287 (59.58%), Query Frame = 0
Query: 1 MLGALNRLKRHKSPGSDGIPADVYKLAIGDE--ISPMGKALMAVVGQV-----IPDVWMESTVVSIPKKGDLTDMNNYRGISLMGTGLKVLMVLISLRLSAAMEREGLFSPAQAGFRRQEECATQVACLLEITKRRKIRGKPSYLAFVDLKKAYDTVPHEALLAKLDYYGVRGRMLGFIWALYANRKIAVRCRGGMSDPVALARGVRQGCPLSPLLFNIFINDVLDGAAELGIPVGAAGEVIVSGLLFADDLVCTVPTRRKLVGMMEHLTTWLEENEMQVGIKKCGV 280
+ AL +KSPGSDGIP++V+KL +E SP K +V ++ IP S +V IPKKGD+ D NNYRGISL+ T KVL +I+ RLS + + QAGFR +EEC Q L E+ +RRKI G +++ F+D KAYD VPH+ALL K+ G+ G++ I ALY + K+ VR +S V GVRQGCP SPLLF+IFIND+LDG + +P G E+ GLLFADD V + +L +E LT W + EMQ+ +KCG+
Sbjct: 1084 ICAALKSTPNNKSPGSDGIPSEVWKLVQNEEEPTSPFAKLFSKLVNKIWEDEKIPQKLDPSVIVPIPKKGDMRDPNNYRGISLIPTLSKVLSKIIARRLSKIDNKHDILVKEQAGFRSREECVAQATALYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKSSGIGGKLYRMIEALYRSPKMCVRVGDRLSKIVEYNCGVRQGCPASPLLFDIFINDLLDGIKGVKVP-GIDTEI--PGLLFADDAVVLAESPAELQIALEKLTVWSLKWEMQINQEKCGI 1367
BLAST of mRNA_H-elongata_contig179052.4737.1 vs. uniprot
Match: L7JRS9_TRAHO (RNA-directed DNA polymerase, Non LTR Retrotransposon n=1 Tax=Trachipleistophora hominis TaxID=72359 RepID=L7JRS9_TRAHO) HSP 1 Score: 216 bits (549), Expect = 3.260e-61 Identity = 120/292 (41.10%), Postives = 172/292 (58.90%), Query Frame = 0
Query: 5 LNRLKRHKSPGSDGIPADVYKLAIGD-EIS-PMGKALMAVVGQV-----IPDVWMESTVVSIPKKGDLTDMNNYRGISLMGTGLKVLMVLISLRLSAAMEREGLFSPAQAGFRRQEECATQVACLLEITKRRKIRGKPSYLAFVDLKKAYDTVPHEALLAKLDYYGVRGRMLGFIWALYANRKIAVRCRGGMSDPVALARGVRQGCPLSPLLFNIFINDVLDGAAELGIPVGAAGEVIVSGLLFADDLVCTVPTRRKLVGMMEHLTTWLEENEMQVGIKKCGVTVVGKKMTA 289
L ++R K+PG DGIP D YK A D E+ P+ + L ++ + IPD W E+ +V IPKKGD++ +NYRGISL+ T K+ +++ R+S E + QAGFRR EEC Q L+EI KRR++ G+ +Y+ F+D KAYD VPH ALL K+ G+ G++LGF ALY + + +VR S+ GV+QGCP SP+LFNI+IND+ +G + + + GA + GLLFADD V + L + L W + +M+V I KCG + G + A
Sbjct: 21 LKSVRRGKAPGVDGIPYDFYKCAQDDIELEHPLSRTLYLLIHRSFMTGKIPDRWNEAIIVPIPKKGDMSRTDNYRGISLINTVCKIATKIVAERISRICEANNILINEQAGFRRLEECVAQATSLVEILKRRELEGQTTYVVFIDFTKAYDRVPHGALLHKMKMLGLNGKLLGFTEALYRSPRASVRVGEDTSECFEYQIGVKQGCPASPILFNIYINDLFEGLSGIELEPGAKP---IPGLLFADDAVILAESLAALESDVRKLEEWCNKWKMRVNIDKCGFMIFGDETVA 309
BLAST of mRNA_H-elongata_contig179052.4737.1 vs. uniprot
Match: A0A1R1YD24_9FUNG (RNA-directed DNA polymerase from mobile element jockey (Fragment) n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YD24_9FUNG) HSP 1 Score: 214 bits (545), Expect = 1.760e-60 Identity = 120/284 (42.25%), Postives = 169/284 (59.51%), Query Frame = 0
Query: 4 ALNRLKRHKSPGSDGIPADVYKLAIGDE--ISPMGKALMAVVGQV-----IPDVWMESTVVSIPKKGDLTDMNNYRGISLMGTGLKVLMVLISLRLSAAMEREGLFSPAQAGFRRQEECATQVACLLEITKRRKIRGKPSYLAFVDLKKAYDTVPHEALLAKLDYYGVRGRMLGFIWALYANRKIAVRCRGGMSDPVALARGVRQGCPLSPLLFNIFINDVLDGAAELGIPVGAAGEVIVSGLLFADDLVCTVPTRRKLVGMMEHLTTWLEENEMQVGIKKCGV 280
AL +KSPGSDGIP++V+KL ++ SP K ++ + +P S VV IPKKGD+ D NNYRGISL+ T KV+ +++ RL A + + + QAGFR +EEC Q L E+ +RRKI G +++ F+D KAYD VPH+ALL K+ G+ ++ I ALY + K+ VR +S V GVRQGCP SPLLF+I+IND+L G + IP E +SGLLFADD V + +L +E ++ W ++ EMQ+ +KCG+
Sbjct: 313 ALKTTPNNKSPGSDGIPSEVWKLVQNEKEPTSPFAKVTSRIINGIWDSENMPKQMDPSVVVPIPKKGDMRDPNNYRGISLIPTLAKVISKIVARRLCAIDNKYEILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKTAGIGSKLYRIIEALYRSPKMCVRVGDKLSKLVEYNCGVRQGCPASPLLFDIYINDLLHGLKGVEIP---GTEATISGLLFADDAVVLAESPSELQIALEKISAWSQKWEMQINQEKCGI 593
BLAST of mRNA_H-elongata_contig179052.4737.1 vs. uniprot
Match: A0A1R0GP03_9FUNG (RNA-directed DNA polymerase from mobile element jockey n=1 Tax=Smittium mucronatum TaxID=133383 RepID=A0A1R0GP03_9FUNG) HSP 1 Score: 215 bits (548), Expect = 5.340e-60 Identity = 129/290 (44.48%), Postives = 173/290 (59.66%), Query Frame = 0
Query: 4 ALNRLKRHKSPGSDGIPADVYKLAIGDEI--SPMGKALMAVVGQV-----IPDVWMESTVVSIPKKGDLTDMNNYRGISLMGTGLKVLMVLISLRLSAAMEREGLFSPAQAGFRRQEECATQVACLLEITKRRKIRGKPSYLAFVDLKKAYDTVPHEALLAKLDYYGVRGRMLGFIWALYANRKIAVRCRGGMSDPVALARGVRQGCPLSPLLFNIFINDVLDGAAELGIPVGAAGEVIVSGLLFADDLVCTVPTRRKLVGMMEHLTTWLEENEMQVGIKKCGVTVVGKK 286
ALN +K+PG DGIP++V+K +EI S + K L VV ++ IP+ S VV IPKKGDL D NNYRGISL+ T +K++ + + +LS + + QAGFR +EEC Q L EI +RRKI+G P+++ F+D KAYD VPH+ALL KL G+ G + I ALY + KI VR +S V GVRQGCP SP+LF+++IND+ + GI V GE I GLLFADD V + KL E ++ W ++ EMQV KCGV +G +
Sbjct: 358 ALNNTPSNKAPGVDGIPSEVWKTVQDEEIPTSNLAKLLYKVVKRIWNMAYIPEKLNTSIVVPIPKKGDLRDPNNYRGISLIPTLVKIVAKVAASKLSFLDLKYNILVKEQAGFRSREECVAQATVLYEIVRRRKIKGLPTWIGFIDFAKAYDRVPHQALLQKLKIQGIGGHLHKVISALYKSPKICVRFGSYLSPVVEYNCGVRQGCPASPILFDLYINDLFENIK--GITVPEIGEKI-KGLLFADDAVVFADSPAKLQIAFEKVSQWAKKWEMQVNASKCGVMGIGSQ 644
BLAST of mRNA_H-elongata_contig179052.4737.1 vs. uniprot
Match: A0A1R1YJD8_9FUNG (LINE-1 retrotransposable element ORF2 protein n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YJD8_9FUNG) HSP 1 Score: 215 bits (547), Expect = 1.210e-59 Identity = 128/306 (41.83%), Postives = 178/306 (58.17%), Query Frame = 0
Query: 4 ALNRLKRHKSPGSDGIPADVYKLAIGDEI---SPMGKALMAVVGQV-----IPDVWMESTVVSIPKKGDLTDMNNYRGISLMGTGLKVLMVLISLRLSAAMEREGLFSPAQAGFRRQEECATQVACLLEITKRRKIRGKPSYLAFVDLKKAYDTVPHEALLAKLDYYGVRGRMLGFIWALYANRKIAVRCRGGMSDPVALARGVRQGCPLSPLLFNIFINDVLDGAAELGIPVGAAGEVIVSGLLFADDLVCTVPTRRKLVGMMEHLTTWLEENEMQVGIKKCGV-----------TVVGKKMTAV 290
AL KSPG DGIP++ +K + EI SP+ K L ++ ++ IP+ S VV IPKKGD+ + NNYRGISL+ T KV+ +I+ RL + + + QAGFR +EEC Q L E+ +RRKI G +++ F+D KAYD VPHEALL K+ G+ G++ I ALY + K+ VR G +S V GVRQGCP SP+LF+I+IND+LDG + +P E ++ GLLFADD V + +L +E L+ W + EMQ+ +KCGV TV+GK + V
Sbjct: 775 ALKSTPNKKSPGYDGIPSEAWK-TVQHEIEPTSPLAKVLFRLIKEIWDNESIPEQLDPSVVVPIPKKGDMREPNNYRGISLIPTLSKVVSKIIARRLCKIENKYDILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHEALLKKIRACGIGGKVYRIIEALYRSPKMCVRIGGQLSKLVEYNCGVRQGCPASPILFDIYINDLLDGIKGVKVP---GVEEVIPGLLFADDAVVLAESPAELQIALEKLSAWSNKWEMQINQEKCGVMGINGNTGMLFTVMGKPINQV 1076 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig179052.4737.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig179052.4737.1 ID=prot_H-elongata_contig179052.4737.1|Name=mRNA_H-elongata_contig179052.4737.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=290bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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