prot_H-elongata_contig105744.473.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig105744.473.1
Unique Nameprot_H-elongata_contig105744.473.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length63
Homology
BLAST of mRNA_H-elongata_contig105744.473.1 vs. uniprot
Match: A0A6H5KNX1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX1_9PHAE)

HSP 1 Score: 54.7 bits (130), Expect = 1.500e-8
Identity = 23/46 (50.00%), Postives = 30/46 (65.22%), Query Frame = 0
Query:   18 MSQVDRDVLRALFSATEGNSWYFKRNWCKDAKLEEWYGVEVNTDGR 63
            M+  DR VL ALF +T G+ W    NW  DA L +WYGV+V+ +GR
Sbjct:    1 MASTDRAVLSALFQSTRGSGWKQSNNWNTDAPLSDWYGVDVDGEGR 46          
BLAST of mRNA_H-elongata_contig105744.473.1 vs. uniprot
Match: A0A6H5KVC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVC7_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 2.740e-8
Identity = 26/47 (55.32%), Postives = 33/47 (70.21%), Query Frame = 0
Query:   17 TMSQVDRDVLRALFSATEGNSWYFKRNWCKDAKLEEWYGVEVNTDGR 63
            TM+Q DR+ L AL++AT G  W  KRNW   A L +WYGVEV++ GR
Sbjct:   95 TMAQPDREALVALYNATGGAKWENKRNWNTRAALSQWYGVEVDSQGR 141          
BLAST of mRNA_H-elongata_contig105744.473.1 vs. uniprot
Match: A0A6H5KDU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDU0_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 4.060e-8
Identity = 26/47 (55.32%), Postives = 32/47 (68.09%), Query Frame = 0
Query:   17 TMSQVDRDVLRALFSATEGNSWYFKRNWCKDAKLEEWYGVEVNTDGR 63
            TM+Q DR  L AL++AT G  W  KRNW   A L +WYGVEV++ GR
Sbjct:  139 TMAQPDRKALVALYNATGGAKWRNKRNWNTRAALSQWYGVEVDSQGR 185          
BLAST of mRNA_H-elongata_contig105744.473.1 vs. uniprot
Match: A0A7X4EHX8_9BACT (Uncharacterized protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7X4EHX8_9BACT)

HSP 1 Score: 57.4 bits (137), Expect = 4.720e-8
Identity = 25/45 (55.56%), Postives = 30/45 (66.67%), Query Frame = 0
Query:   19 SQVDRDVLRALFSATEGNSWYFKRNWCKDAKLEEWYGVEVNTDGR 63
            S  DRD+L AL+ AT+G +W    NW  DA LEEWYGVE +  GR
Sbjct:   73 STSDRDILVALYEATDGPNWANSENWLTDAPLEEWYGVETDAAGR 117          
BLAST of mRNA_H-elongata_contig105744.473.1 vs. uniprot
Match: A0A6B1FFK8_9BACT (Uncharacterized protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A6B1FFK8_9BACT)

HSP 1 Score: 57.0 bits (136), Expect = 6.430e-8
Identity = 22/42 (52.38%), Postives = 32/42 (76.19%), Query Frame = 0
Query:   22 DRDVLRALFSATEGNSWYFKRNWCKDAKLEEWYGVEVNTDGR 63
            DRDVL A+++AT+G++W+ K NW  DA + EWYGV+ +  GR
Sbjct:   53 DRDVLVAIYNATDGSNWHRKENWLTDAPVAEWYGVDTDAAGR 94          
BLAST of mRNA_H-elongata_contig105744.473.1 vs. uniprot
Match: D7FPS8_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPS8_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 6.440e-8
Identity = 25/61 (40.98%), Postives = 37/61 (60.66%), Query Frame = 0
Query:    3 FLRGNKLTNVRLPATMSQVDRDVLRALFSATEGNSWYFKRNWCKDAKLEEWYGVEVNTDGR 63
            F +  K T  ++P T++ VD   L AL+  T+G+ W  +  WC   +L+EW+GVEVN  GR
Sbjct:    8 FWKAKKRTP-KVPFTLAPVDYGALTALYRLTQGDGWTRRDGWCTPVELQEWFGVEVNEQGR 67          
BLAST of mRNA_H-elongata_contig105744.473.1 vs. uniprot
Match: D7FJV1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJV1_ECTSI)

HSP 1 Score: 56.2 bits (134), Expect = 1.200e-7
Identity = 25/46 (54.35%), Postives = 31/46 (67.39%), Query Frame = 0
Query:   18 MSQVDRDVLRALFSATEGNSWYFKRNWCKDAKLEEWYGVEVNTDGR 63
            M+  DRDVL AL++ATEG +W    NW  DA L +W+GV VN  GR
Sbjct:    1 MASTDRDVLVALYNATEGANWQNSINWGTDADLSQWFGVTVNHQGR 46          
BLAST of mRNA_H-elongata_contig105744.473.1 vs. uniprot
Match: B3JG60_9BACT (Leucine Rich Repeat protein n=3 Tax=Bacteroidaceae TaxID=815 RepID=B3JG60_9BACT)

HSP 1 Score: 55.1 bits (131), Expect = 3.050e-7
Identity = 22/42 (52.38%), Postives = 28/42 (66.67%), Query Frame = 0
Query:   22 DRDVLRALFSATEGNSWYFKRNWCKDAKLEEWYGVEVNTDGR 63
            +RD+L AL+ AT G++W    NWC DA L EWYGV  +  GR
Sbjct:    9 ERDILIALYDATNGDAWTNNSNWCSDADLSEWYGVYTDYQGR 50          
BLAST of mRNA_H-elongata_contig105744.473.1 vs. uniprot
Match: D8LLG1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG1_ECTSI)

HSP 1 Score: 54.7 bits (130), Expect = 4.210e-7
Identity = 23/46 (50.00%), Postives = 29/46 (63.04%), Query Frame = 0
Query:   18 MSQVDRDVLRALFSATEGNSWYFKRNWCKDAKLEEWYGVEVNTDGR 63
            M+  D D L AL+ AT+G +W   RNW  D  L +WYGVE+N  GR
Sbjct:    1 MAATDYDALVALYHATDGANWKQNRNWITDTDLSQWYGVELNDQGR 46          
BLAST of mRNA_H-elongata_contig105744.473.1 vs. uniprot
Match: A0A7X3WE75_9BACT (BIG2 domain-containing protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7X3WE75_9BACT)

HSP 1 Score: 54.7 bits (130), Expect = 4.230e-7
Identity = 23/41 (56.10%), Postives = 28/41 (68.29%), Query Frame = 0
Query:   22 DRDVLRALFSATEGNSWYFKRNWCKDAKLEEWYGVEVNTDG 62
            DRDVL AL++AT+G +W    NW  DA LE WYGV   T+G
Sbjct:  753 DRDVLVALYNATDGPNWIRSDNWLTDAPLESWYGVSATTEG 793          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig105744.473.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KNX1_9PHAE1.500e-850.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KVC7_9PHAE2.740e-855.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDU0_9PHAE4.060e-855.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7X4EHX8_9BACT4.720e-855.56Uncharacterized protein n=1 Tax=Gemmatimonadetes b... [more]
A0A6B1FFK8_9BACT6.430e-852.38Uncharacterized protein n=1 Tax=Gemmatimonadetes b... [more]
D7FPS8_ECTSI6.440e-840.98Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
D7FJV1_ECTSI1.200e-754.35LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
B3JG60_9BACT3.050e-752.38Leucine Rich Repeat protein n=3 Tax=Bacteroidaceae... [more]
D8LLG1_ECTSI4.210e-750.00LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A7X3WE75_9BACT4.230e-756.10BIG2 domain-containing protein n=1 Tax=Gemmatimona... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 16..63
e-value: 1.4E-6
score: 28.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig105744contigH-elongata_contig105744:460..833 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig105744.473.1mRNA_H-elongata_contig105744.473.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig105744 460..903 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig105744.473.1 ID=prot_H-elongata_contig105744.473.1|Name=mRNA_H-elongata_contig105744.473.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=63bp
MSFLRGNKLTNVRLPATMSQVDRDVLRALFSATEGNSWYFKRNWCKDAKL
EEWYGVEVNTDGR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf