prot_H-elongata_contig178989.4731.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig178989.4731.1
Unique Nameprot_H-elongata_contig178989.4731.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length282
Homology
BLAST of mRNA_H-elongata_contig178989.4731.1 vs. uniprot
Match: A0A6H5KVR5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVR5_9PHAE)

HSP 1 Score: 186 bits (472), Expect = 2.140e-53
Identity = 109/277 (39.35%), Postives = 151/277 (54.51%), Query Frame = 0
Query:    2 EFHQVLGHPGERITRDTARMAGVQLSGTWRPCVHCSESRVRRYAVPKSTENRSDTRAGRLFIDLTGPFHETSIGGNRFAMLCVDDFTRFKFVRFLKHKSDATDALRGVINDYLAPEGLK--IGIIRTDGGGEWCG-QFLSFMSEHGIKRESMPPYTPQYNGVAERALGLLRDKTVA-------LLRGVMEGKSDHLWAEAMAYACEMSNRCTSSSLDSGTSPHELWYGHRPTFDGILPFGTVGYLRRSKPKHKLAPRGAKCIMLGLAADCPRNTYRV 268
            EFH +  H  E + R TA+  G +L G    C  CS S+  R  + + T+ RSD + GR+F DL G     S+GG  + ++  DDFTR  ++ FL++KSDA  A R  +    A  G+   + I+R+D GG++ G  F S  +E  IK+E  P Y+PQYNGVAER LGL+ +  +A       L   V   K+D LWAEAM +ACE  N    S+     SP+E+WYG  P      PF    Y R  +P  KL P+G  C  +G + D PR+ +RV
Sbjct:   36 EFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVRETKRRSDKKLGRVFADLGGRKDIASVGGKHYPIIVKDDFTRHTWMYFLRNKSDAGSAFRTFLASVRA-NGVPSFVEIVRSDNGGKFFGGDFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGE-PRPARPYPFSKPAYCRWQRPS-KLLPKGESCFYVGPSRDHPRDCHRV 309          
BLAST of mRNA_H-elongata_contig178989.4731.1 vs. uniprot
Match: A0A6H5JV76_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV76_9PHAE)

HSP 1 Score: 188 bits (477), Expect = 4.370e-52
Identity = 113/289 (39.10%), Postives = 158/289 (54.67%), Query Frame = 0
Query:    2 EFHQVLGHPGERITRDTARMAGVQLSGTWRPCVHCSESRVRRYAVPKSTENRSDTRAGRLFIDLTGPFHETSIGGNRFAMLCVDDFTRFKFVRFLKHKSDATDALR---GVINDYLAPEGLKIGIIRTDGGGEWCG-QFLSFMSEHGIKRESMPPYTPQYNGVAERALGLLRDKTVA-------LLRGVMEGKSDHLWAEAMAYACEMSNRCTSSSLDSGTSPHELWYGHRPTFDGILPFGTVGYLRRSKPKHKLAPRGAKCIMLGLAADCPRNTYRVRDLTTGQIIHR 279
            EFH +  H  E + R TA+  G +L G    C  CS S+  R  + + T+ RSD + GR+F+DL G     S+GG  + M+  DDFTR  ++ FLK++SDA  A R     +   + P  ++I  +R+D GGE+ G +F S  +E  IK+E  P Y+PQYNGVAER LGL+ +  +A       L   V   K+D LWAEAM +ACE  N    S+     SP+E+WYG  P      PF    Y R  +P  KL P+G  C  +G + D PR+ +RV  LT  + I +
Sbjct:  256 EFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVRETKRRSDKKLGRVFVDLGGRKDIASVGGKHYPMIVKDDFTRRTWMYFLKNESDAGGAFRTFLASVRANIVPSFVEI--VRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGE-PRPARPYPFLKPAYCRWQRPT-KLLPKGESCFYVGPSRDHPRDCHRV--LTRARTIQK 538          
BLAST of mRNA_H-elongata_contig178989.4731.1 vs. uniprot
Match: A0A6H5JBA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA7_9PHAE)

HSP 1 Score: 192 bits (487), Expect = 1.050e-51
Identity = 110/277 (39.71%), Postives = 155/277 (55.96%), Query Frame = 0
Query:    2 EFHQVLGHPGERITRDTARMAGVQLSGTWRPCVHCSESRVRRYAVPKSTENRSDTRAGRLFIDLTGPFHETSIGGNRFAMLCVDDFTRFKFVRFLKHKSDATDALRGVINDYLAPEGLK--IGIIRTDGGGEWCG-QFLSFMSEHGIKRESMPPYTPQYNGVAERALGLLRDKTVA-------LLRGVMEGKSDHLWAEAMAYACEMSNRCTSSSLDSGTSPHELWYGHRPTFDGILPFGTVGYLRRSKPKHKLAPRGAKCIMLGLAADCPRNTYRV 268
            EFH +  H  + + R TA+  G +L G    C  CS ++  +  + + T++RSD + GR+F+DL G     S+GG  + M+  DDFTR  ++ FLKHKSDA  A R  +    A +G+   + I+R+D GGE+ G +F S  +E  IK+E  P Y+PQYNGVAER LGL+ +  +A       L   V   K+D LWAEAM +ACE  N    S+     SP+E+WYG  P      PF    Y R  +P  KL P+G  C  +G + D PR+ +RV
Sbjct:  668 EFHNIYAHSHKGLLRTTAKRLGTELVGEMHECTGCSMAKAVKKGIARETKSRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLASVRA-DGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYGE-PRPARPYPFLKPAYCRWQRPS-KLLPKGESCFYVGPSRDHPRDCHRV 941          
BLAST of mRNA_H-elongata_contig178989.4731.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE)

HSP 1 Score: 192 bits (487), Expect = 1.070e-51
Identity = 110/277 (39.71%), Postives = 155/277 (55.96%), Query Frame = 0
Query:    2 EFHQVLGHPGERITRDTARMAGVQLSGTWRPCVHCSESRVRRYAVPKSTENRSDTRAGRLFIDLTGPFHETSIGGNRFAMLCVDDFTRFKFVRFLKHKSDATDALRGVINDYLAPEGLK--IGIIRTDGGGEWCG-QFLSFMSEHGIKRESMPPYTPQYNGVAERALGLLRDKTVA-------LLRGVMEGKSDHLWAEAMAYACEMSNRCTSSSLDSGTSPHELWYGHRPTFDGILPFGTVGYLRRSKPKHKLAPRGAKCIMLGLAADCPRNTYRV 268
            EFH +  H  + + R TA+  G +L G    C  CS ++  +  + + T++RSD + GR+F+DL G     S+GG  + M+  DDFTR  ++ FLKHKSDA  A R  +    A +G+   + I+R+D GGE+ G +F S  +E  IK+E  P Y+PQYNGVAER LGL+ +  +A       L   V   K+D LWAEAM +ACE  N    S+     SP+E+WYG  P      PF    Y R  +P  KL P+G  C  +G + D PR+ +RV
Sbjct:  375 EFHNIYAHSHKGLLRTTAKRLGTELVGEMHECTGCSMAKAVKKGIARETKSRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLASVRA-DGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYGE-PRPARPYPFLKPAYCRWQRPS-KLLPKGESCFYVGPSRDHPRDCHRV 648          
BLAST of mRNA_H-elongata_contig178989.4731.1 vs. uniprot
Match: A0A6H5L3Y0_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Y0_9PHAE)

HSP 1 Score: 188 bits (477), Expect = 1.310e-50
Identity = 110/277 (39.71%), Postives = 152/277 (54.87%), Query Frame = 0
Query:    2 EFHQVLGHPGERITRDTARMAGVQLSGTWRPCVHCSESRVRRYAVPKSTENRSDTRAGRLFIDLTGPFHETSIGGNRFAMLCVDDFTRFKFVRFLKHKSDATDALRGVINDYLAPEGLK--IGIIRTDGGGEWCG-QFLSFMSEHGIKRESMPPYTPQYNGVAERALGLLRDKTVA-------LLRGVMEGKSDHLWAEAMAYACEMSNRCTSSSLDSGTSPHELWYGHRPTFDGILPFGTVGYLRRSKPKHKLAPRGAKCIMLGLAADCPRNTYRV 268
            EFH +  H  E + R TA+  G +L G    C  CS S+  R  + + T+ RSD + GR+F+DL G     S+GG  + M+  DDFTR  ++ FL++KSDA  A R  +    A  G+   + I+R+D GGE+ G +F S  +E  IK+E  P Y+PQYNGVAER LGL+ +  +A       L   V   K+D LWAEAM +ACE  N    S+      P+E+WYG  P      PF    Y R  +P  KL P+G  C  +G + D PR+ +RV
Sbjct:  134 EFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVRETKRRSDKKLGRVFVDLGGRKDSASVGGKHYPMIVKDDFTRRTWMYFLRNKSDAGSAFRTFLASVRA-NGVPSFVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMPPYEMWYGE-PRPARPYPFLKPAYCRWQRPT-KLLPKGESCFYVGPSRDHPRDCHRV 407          
BLAST of mRNA_H-elongata_contig178989.4731.1 vs. uniprot
Match: A0A6H5K2M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M6_9PHAE)

HSP 1 Score: 188 bits (477), Expect = 1.320e-50
Identity = 111/281 (39.50%), Postives = 154/281 (54.80%), Query Frame = 0
Query:    2 EFHQVLGHPGERITRDTARMAGVQLSGTWRPCVHCSESRVRRYAVPKSTENRSDTRAGRLFIDLTGPFHETSIGGNRFAMLCVDDFTRFKFVRFLKHKSDATDALRGVINDYLAPEGLK--IGIIRTDGGGEWCG-QFLSFMSEHGIKRESMPPYTPQYNGVAERALGLLRDKTVA-------LLRGVMEGKSDHLWAEAMAYACEMSNRCTSSSLDSGTSPHELWYGH----RPTFDGILPFGTVGYLRRSKPKHKLAPRGAKCIMLGLAADCPRNTYRV 268
            EFH +  H  E + R TA+  G++L+G    C  CS S+  +  +   T+ RSD + GR+F+DL G     S+GG  + M+  DDFTR  ++ FLK KSDA  A R  +    A +G+   + I+R+D GGE+ G +F S  +E  IK+E  P Y+PQYNGVAER LGL+    +A       L   V   K+D LWAEAM +ACE  N    S+     SP+E+W+G     RP      PF    Y R  +P  KL P+G  C  +G + D PR+ +RV
Sbjct:  574 EFHNIYAHSHEGLLRTTAKRLGIELTGKMHACTGCSMSKAFKKGIAHETKCRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRTWMYFLKSKSDAASAFRSFLASVRA-DGIPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEAAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEAINHTACSANPDSKSPYEMWHGEASHARP-----YPFLKPAYCRWQRPS-KLLPKGEACFYVGPSRDHPRDCHRV 847          
BLAST of mRNA_H-elongata_contig178989.4731.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE)

HSP 1 Score: 187 bits (476), Expect = 3.100e-50
Identity = 111/277 (40.07%), Postives = 152/277 (54.87%), Query Frame = 0
Query:    2 EFHQVLGHPGERITRDTARMAGVQLSGTWRPCVHCSESRVRRYAVPKSTENRSDTRAGRLFIDLTGPFHETSIGGNRFAMLCVDDFTRFKFVRFLKHKSDATDALRGVINDYLAPEGLK--IGIIRTDGGGEWCG-QFLSFMSEHGIKRESMPPYTPQYNGVAERALGLLRDKTVA-------LLRGVMEGKSDHLWAEAMAYACEMSNRCTSSSLDSGTSPHELWYGHRPTFDGILPFGTVGYLRRSKPKHKLAPRGAKCIMLGLAADCPRNTYRV 268
            EFH +  H  E + R TA+  G +L G    C  CS S+  R  +   T+ RSD + GR+F+DL G     S+GG  + M+  DDFTR  ++ FL++KSDA  A R  +    A  G+   + I+R+D GGE+ G +F S  +E  IK+E  P Y+PQYNGVAER LGL+ +  +A       L   V   K+D LWAEAM +ACE  N    S+     SP+E+WYG  P      PF    Y R  +P  KL P+G  C  +G + D PR+ +RV
Sbjct:  189 EFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVGETKRRSDKKLGRVFVDLGGRKDIASVGGKHYPMIVKDDFTRRTWICFLRNKSDAGSAFRTFLASVRA-NGVPSFVEIVRSDNGGEFFGGEFTSVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGE-PRPARPYPFLKPAYCRWQRPT-KLLPKGESCFYVGPSRDHPRDCHRV 462          
BLAST of mRNA_H-elongata_contig178989.4731.1 vs. uniprot
Match: A0A6H5JH25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH25_9PHAE)

HSP 1 Score: 185 bits (469), Expect = 2.720e-49
Identity = 109/278 (39.21%), Postives = 156/278 (56.12%), Query Frame = 0
Query:    2 EFHQVLGHPGERITRDTARMAGVQLSGTWRPCVHCSESRVRRYAVPKSTENRSDTRAGRLFIDLTGPFHETSIGGNRFAMLCVDDFTRFKFVRFLKHKSDATDALRGVINDYLAPEGLK--IGIIRTDGGGEWCG-QFLSFMSEHGIKRESMPPYTPQYNGVAERALGLLRDKTVA-------LLRGVMEGKSDHLWAEAMAYACEMSNRCTSSSLDSGTSPHELWYGH-RPTFDGILPFGTVGYLRRSKPKHKLAPRGAKCIMLGLAADCPRNTYRV 268
            +FH + GH  E + R TA+  G++L+G    C  CS  +  R A+   T N SD + GR+F++L G     SIGG  + M+  DDFTR  ++ FL+ KSDA  A R  + +  A +G+   I I+R+D GGE+ G +F S  +E  IK+E  P ++P++NGVAER LGL+ +  +A       L   V   K+D LWAEAM +ACE  N    S+     SP+E+WYG  RP      PF    Y +  +P  KL P+G  C  +G + D PR+ +RV
Sbjct:  395 DFHNIYGHAHEGMLRTTAKRLGIELTGKMHACSGCSMGKAIRKAIAHVTTNSSDKKLGRVFVNLGGKKGVASIGGKHYPMILKDDFTRRAWMYFLRSKSDAGSAFRSFLANVRA-DGIPSLIEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAHSPEFNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEALNHTACSANPDSKSPYEMWYGEARPARP--YPFLKPAYCKWQRPS-KLLPKGESCFYVGPSRDHPRDCHRV 668          
BLAST of mRNA_H-elongata_contig178989.4731.1 vs. uniprot
Match: A0A6H5LL52_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL52_9PHAE)

HSP 1 Score: 167 bits (423), Expect = 1.620e-45
Identity = 109/267 (40.82%), Postives = 146/267 (54.68%), Query Frame = 0
Query:    4 HQVLGHPGERITRDTARMAGVQLSG-TWRPCVHCSESRVRRYAVPKSTENRSDTRAGRLFIDLTGPFHETSIGGNRFAMLCVDDFTRFKFVRFLKHKSDATDALRGVINDYLAPE-GLKIGIIRTDGGGEWCGQFLSFMSEHGIKRESMPPYTPQYNGVAERALGLLRDKTVALLRGVMEGKSDH-----LWAEAMAYACEMSNRCTSSSLDSG-TSPHELWYGHRPTFDGILPFGTVGYLRRSKPKHKLAPRGAKCIMLGLAADCP 262
            H   GH  E + + TA+  GVQL+G    PC+ CS S+ +   + KST+ R+  +  RLF++L G     SIGGN + ++  DD TR+  V FLKHKSDA  A    + DY A     ++ + RTDGGGE+ GQF       GIK+E  PP TP+YNGVAERALGLL D  +A      E   D      LWAEA++ AC   N CT+++ + G  SP EL++G  P      PF     + +S+ K +  PR  K   LGL    P
Sbjct:  139 HNSHGHTHEELLQKTAKQQGVQLTGGPLLPCLGCSMSKGQVKPISKSTDTRAANKLFRLFLNLGGRMQFKSIGGNWYTLIIRDDCTRWTRVFFLKHKSDAAAAFEQYLADYRAETVPCEVFVARTDGGGEFQGQFAEVCRRSGIKQEFTPPNTPKYNGVAERALGLLADSALASRIQAKEMFPDAPVSPGLWAEAISCACHQMN-CTATTGNPGHKSPEELFHGTPPPVGSTHPF-LKPLVFKSRRKARSQPRARKDGTLGLPTITP 403          
BLAST of mRNA_H-elongata_contig178989.4731.1 vs. uniprot
Match: A0A6H5K1N9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1N9_9PHAE)

HSP 1 Score: 166 bits (421), Expect = 6.720e-43
Identity = 96/276 (34.78%), Postives = 147/276 (53.26%), Query Frame = 0
Query:    2 EFHQVLGHPGERITRDTARMAGVQLSGTWRPCVHCSESRVRRYAVPKSTENRSDTRAGRLFIDLTGPFHETSIGGNRFAMLCVDDFTRFKFVRFLKHKSDATDALRGVINDYLAPEGLK-IGIIRTDGGGEWC-GQFLSFMSEHGIKRESMPPYTPQYNGVAERALGLLRDKTVA-------LLRGVMEGKSDHLWAEAMAYACEMSNRCTSSSLDSGTSPHELWYGHRPTFDGILPFGTVGYLRRSKPKHKLAPRGAKCIMLGLAADCPRNTYRV 268
            +FH   GH  E + R TA+  G  L G  R C+ CS ++     +P  T  R+  +  R F++L+G     S+GG  + ++  DD+TR+  V FLKHKSDA +A    + +  A      + ++R+D GGE+  G+F     ++ IK+E  P ++P+YNGVAERALGL++D  +A       L  G    +S  LWAEA+A++C   N  +++S     SP+E+W+GH P      PF     + + K  HK  P   KC  LG   +  R+  R+
Sbjct:  310 DFHCAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSEPIPNKTSTRAFKKLQRFFVELSGKARAQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLKEKRADGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAAIAARIQAPTLYPGAPNYRS--LWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHGHPPPPGATYPFLKPA-VYKVKRTHKSEPTAQKCFYLGPGINTNRDCVRI 582          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig178989.4731.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KVR5_9PHAE2.140e-5339.35Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JV76_9PHAE4.370e-5239.10Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5JBA7_9PHAE1.050e-5139.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZH7_9PHAE1.070e-5139.71Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L3Y0_9PHAE1.310e-5039.71Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K2M6_9PHAE1.320e-5039.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRL9_9PHAE3.100e-5040.07Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JH25_9PHAE2.720e-4939.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LL52_9PHAE1.620e-4540.82Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K1N9_9PHAE6.720e-4334.78Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 60..171
e-value: 7.5E-14
score: 51.9
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 43..221
score: 17.988
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 48..239
e-value: 3.9E-26
score: 93.5
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 3..278
NoneNo IPR availablePANTHERPTHR11439:SF250coord: 3..278
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 60..224

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig178989contigH-elongata_contig178989:316..1161 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig178989.4731.1mRNA_H-elongata_contig178989.4731.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig178989 310..1161 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig178989.4731.1 ID=prot_H-elongata_contig178989.4731.1|Name=mRNA_H-elongata_contig178989.4731.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=282bp
MEFHQVLGHPGERITRDTARMAGVQLSGTWRPCVHCSESRVRRYAVPKST
ENRSDTRAGRLFIDLTGPFHETSIGGNRFAMLCVDDFTRFKFVRFLKHKS
DATDALRGVINDYLAPEGLKIGIIRTDGGGEWCGQFLSFMSEHGIKRESM
PPYTPQYNGVAERALGLLRDKTVALLRGVMEGKSDHLWAEAMAYACEMSN
RCTSSSLDSGTSPHELWYGHRPTFDGILPFGTVGYLRRSKPKHKLAPRGA
KCIMLGLAADCPRNTYRVRDLTTGQIIHRQSV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001584Integrase_cat-core
IPR036397RNaseH_sf
IPR039537Retrotran_Ty1/copia-like
IPR012337RNaseH-like_sf