prot_H-elongata_contig17896.4729.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig17896.4729.1
Unique Nameprot_H-elongata_contig17896.4729.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length228
Homology
BLAST of mRNA_H-elongata_contig17896.4729.1 vs. uniprot
Match: A0A6H5KZ87_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ87_9PHAE)

HSP 1 Score: 157 bits (396), Expect = 3.580e-45
Identity = 77/91 (84.62%), Postives = 83/91 (91.21%), Query Frame = 0
Query:    1 MGDSAPVSRWAQRKQQRELMYATSSDAVQR-YRKKQTEAKTMVCQKCLQVGHWTYECKGKPTYKARVSSTKILENPALKPKFHLDLPPGEE 90
            MGD+APVSRWAQRKQQRE+MYATSSDA+Q  +RKKQ  AK MVCQKCLQVGHWTYECKGK TYKARVS T+ILENP LKPKFHLDLPPG+E
Sbjct:    1 MGDAAPVSRWAQRKQQREMMYATSSDAIQGVFRKKQKAAKNMVCQKCLQVGHWTYECKGKATYKARVSRTEILENPDLKPKFHLDLPPGKE 91          
BLAST of mRNA_H-elongata_contig17896.4729.1 vs. uniprot
Match: A0A7S2XVS9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVS9_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 7.610e-21
Identity = 46/87 (52.87%), Postives = 59/87 (67.82%), Query Frame = 0
Query:    3 DSAPVSRWAQRKQQRELMYATSSDAVQRYRKKQTEAKTMVCQKCLQVGHWTYECKGKPTYKARVSSTKILENPALKPKFHLDLPPGE 89
            D+ PVSRW QR++QR  +YA+S D++    KK    K M CQKCL++GHWTYECK    Y  RVS +K L+ P L+  F+LDLPP E
Sbjct:    8 DNKPVSRWQQRQEQRRQLYASSKDSLIAISKKDAGPKNMQCQKCLKIGHWTYECKASRVYVERVSRSKQLKKPRLQQPFNLDLPPEE 94          
BLAST of mRNA_H-elongata_contig17896.4729.1 vs. uniprot
Match: D8LGL3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGL3_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 8.770e-18
Identity = 43/51 (84.31%), Postives = 47/51 (92.16%), Query Frame = 0
Query:    1 MGDSAPVSRWAQRKQQRELMYATSSDAVQR-YRKKQTEAKTMVCQKCLQVG 50
            MGD+APVSRWAQRKQQRE+MYATSSDA+Q  +RKKQ EAK MVCQKCLQVG
Sbjct:    1 MGDAAPVSRWAQRKQQREMMYATSSDAIQGVFRKKQKEAKNMVCQKCLQVG 51          
BLAST of mRNA_H-elongata_contig17896.4729.1 vs. uniprot
Match: A0A2P4Y342_9STRA (Zinc ion binding protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y342_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 9.880e-17
Identity = 47/114 (41.23%), Postives = 68/114 (59.65%), Query Frame = 0
Query:    1 MGD---SAPVSRWAQRKQQRELMYATSSDAVQRYRK----KQTEAKTMVCQKCLQVGHWTYECKGKPTYKARVSSTKILENPALKPKFHLDLPPGEEGAEDRGTGVAKTKEVKV 107
            MGD    AP+ +WAQRK+ R  MYATS++ V+ +R+        +   +CQKCL+ GHWTYECK +  Y  R S ++ L+NP L+  F+ D PP  +   D+    AK K+ K+
Sbjct:    1 MGDVNGDAPLGKWAQRKEARRNMYATSTEQVRVHRRGLGASSASSAAAMCQKCLRPGHWTYECKNEAVYVQRPSRSQQLKNPKLRQPFNKDKPPELQEEVDKSKDRAKDKKDKI 114          
BLAST of mRNA_H-elongata_contig17896.4729.1 vs. uniprot
Match: A0A225VI99_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VI99_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 1.120e-15
Identity = 42/94 (44.68%), Postives = 59/94 (62.77%), Query Frame = 0
Query:    1 MGD---SAPVSRWAQRKQQRELMYATSSDAVQRYRK----KQTEAKTMVCQKCLQVGHWTYECKGKPTYKARVSSTKILENPALKPKFHLDLPP 87
            MGD    AP+ +WAQRK+ R  MYATS++ V+ +R+            +CQKCL+ GHWTYECK +  Y  R S ++ L+NP L+  F++D PP
Sbjct:    1 MGDVNGDAPLGKWAQRKEARRNMYATSTEQVRVHRRGLGTSSASITAAMCQKCLRPGHWTYECKNEAVYVQRPSRSQQLKNPKLRQPFNMDKPP 94          
BLAST of mRNA_H-elongata_contig17896.4729.1 vs. uniprot
Match: W2G963_PHYPR (Uncharacterized protein n=4 Tax=Phytophthora parasitica TaxID=4792 RepID=W2G963_PHYPR)

HSP 1 Score: 81.3 bits (199), Expect = 3.080e-15
Identity = 43/94 (45.74%), Postives = 59/94 (62.77%), Query Frame = 0
Query:    1 MGDS---APVSRWAQRKQQRELMYATSSDAVQRYRK----KQTEAKTMVCQKCLQVGHWTYECKGKPTYKARVSSTKILENPALKPKFHLDLPP 87
            MGD+   AP+  WAQRK+ R  MYATS+D V+ +R+      + +   +CQKCL+ GHWTYECK +  Y  R S ++ L NP L+  F+ D PP
Sbjct:    1 MGDANGEAPLGIWAQRKEARRNMYATSTDQVRVHRRGLGSSSSSSAAAMCQKCLRPGHWTYECKNEAVYVQRPSRSQQLRNPKLRQPFNKDKPP 94          
BLAST of mRNA_H-elongata_contig17896.4729.1 vs. uniprot
Match: A0A6A4FI13_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A4FI13_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 6.840e-15
Identity = 40/90 (44.44%), Postives = 55/90 (61.11%), Query Frame = 0
Query:    2 GDSAPVSRWAQRKQQRELMYATSSDAVQRYRK----KQTEAKTMVCQKCLQVGHWTYECKGKPTYKARVSSTKILENPALKPKFHLDLPP 87
            G  AP+ +WAQRK+ R  MYATS++ V+  R+        +   +CQKCL+ GHWTYECK    Y  R S ++ L+NP L+  F+ D PP
Sbjct:    5 GGDAPLGKWAQRKEARRNMYATSTEQVRVLRRGVGASAASSAAAMCQKCLRPGHWTYECKNDAVYVQRPSRSQQLKNPKLRQPFNTDKPP 94          
BLAST of mRNA_H-elongata_contig17896.4729.1 vs. uniprot
Match: A0A0W8DKB9_PHYNI (Kidney mitochondrial carrier protein 1 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DKB9_PHYNI)

HSP 1 Score: 81.3 bits (199), Expect = 9.160e-15
Identity = 43/94 (45.74%), Postives = 59/94 (62.77%), Query Frame = 0
Query:    1 MGDS---APVSRWAQRKQQRELMYATSSDAVQRYRK----KQTEAKTMVCQKCLQVGHWTYECKGKPTYKARVSSTKILENPALKPKFHLDLPP 87
            MGD+   AP+  WAQRK+ R  MYATS+D V+ +R+      + +   +CQKCL+ GHWTYECK +  Y  R S ++ L NP L+  F+ D PP
Sbjct:   67 MGDANGEAPLGIWAQRKEARRNMYATSTDQVRVHRRGLGSSSSSSAAAMCQKCLRPGHWTYECKNEAVYVQRPSRSQQLRNPKLRQPFNKDKPP 160          
BLAST of mRNA_H-elongata_contig17896.4729.1 vs. uniprot
Match: A0A329S1Q1_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329S1Q1_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 1.140e-14
Identity = 42/94 (44.68%), Postives = 58/94 (61.70%), Query Frame = 0
Query:    1 MGDS---APVSRWAQRKQQRELMYATSSDAVQRYRK----KQTEAKTMVCQKCLQVGHWTYECKGKPTYKARVSSTKILENPALKPKFHLDLPP 87
            MGD+   AP+  WAQRK+ R  MYATS++ V+ +R+        +   +CQKCL+ GHWTYECK +  Y  R S ++ L NP L+  F+ D PP
Sbjct:    1 MGDANGDAPLGLWAQRKEARRNMYATSTEQVRVHRRGLGASSASSAAAMCQKCLRPGHWTYECKNEAVYVQRPSRSQQLRNPKLRQPFNKDKPP 94          
BLAST of mRNA_H-elongata_contig17896.4729.1 vs. uniprot
Match: A0A0P1AIB6_PLAHL (Multidrug oligosaccharidyl-lipid polysaccharide flippase superfamily n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AIB6_PLAHL)

HSP 1 Score: 82.4 bits (202), Expect = 1.710e-14
Identity = 45/101 (44.55%), Postives = 63/101 (62.38%), Query Frame = 0
Query:    1 MGDSAPVSRWAQRKQQRELMYATSSDAVQRYRK----KQTEAKTMVCQKCLQVGHWTYECKGKPTYKARVSSTKILENPALKPKFHLDLPPGEEGAEDRGT 97
            +GD AP+ +WAQRK+ R  MYATS+D V+ +R+      +     +CQKCLQ GHWTYECK +  Y  R S ++ L NP L+  F+ D PP  +  E++ T
Sbjct:  515 VGD-APLGKWAQRKEARRNMYATSTDQVRVHRRGLGASSSPNVAALCQKCLQPGHWTYECKNEAVYVQRPSRSQQLRNPKLRQPFNQDKPPEMQEDENQKT 614          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17896.4729.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZ87_9PHAE3.580e-4584.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2XVS9_9STRA7.610e-2152.87Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
D8LGL3_ECTSI8.770e-1884.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2P4Y342_9STRA9.880e-1741.23Zinc ion binding protein n=1 Tax=Phytophthora palm... [more]
A0A225VI99_9STRA1.120e-1544.68Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
W2G963_PHYPR3.080e-1545.74Uncharacterized protein n=4 Tax=Phytophthora paras... [more]
A0A6A4FI13_9STRA6.840e-1544.44Uncharacterized protein n=5 Tax=Phytophthora TaxID... [more]
A0A0W8DKB9_PHYNI9.160e-1545.74Kidney mitochondrial carrier protein 1 n=1 Tax=Phy... [more]
A0A329S1Q1_9STRA1.140e-1444.68Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A0P1AIB6_PLAHL1.710e-1444.55Multidrug oligosaccharidyl-lipid polysaccharide fl... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13917zf-CCHC_3coord: 39..75
e-value: 3.4E-15
score: 55.7
NoneNo IPR availablePANTHERPTHR13491:SF0ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 10coord: 24..172
IPR039715Zinc finger CCHC domain-containing protein 10PANTHERPTHR13491ZCCHC10 PROTEINcoord: 24..172
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 21..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17896contigH-elongata_contig17896:824..6020 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17896.4729.1mRNA_H-elongata_contig17896.4729.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig17896 824..6020 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig17896.4729.1 ID=prot_H-elongata_contig17896.4729.1|Name=mRNA_H-elongata_contig17896.4729.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=228bp
MGDSAPVSRWAQRKQQRELMYATSSDAVQRYRKKQTEAKTMVCQKCLQVG
HWTYECKGKPTYKARVSSTKILENPALKPKFHLDLPPGEEGAEDRGTGVA
KTKEVKVKVGKKRRRDDSSSSSSSDSGSGTDSGSSSDSGSSSDSGSSSES
GSSSDSSSNSSSSSSSDGSSSSSDSDSDSDSSSSTSSSSGSDGESHSDAS
SSSSRSSSSSSSSSSNYKKAKKSRQGSG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039715ZCCHC10
IPR036875Znf_CCHC_sf