mRNA_H-elongata_contig178572.4715.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig178572.4715.1 vs. uniprot
Match: D7FT88_ECTSI (Putative glutamate/ornithine acetyltransferase (ISS) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT88_ECTSI) HSP 1 Score: 129 bits (325), Expect = 9.780e-33 Identity = 70/97 (72.16%), Postives = 84/97 (86.60%), Query Frame = 1
Query: 28 HKGEAQIAVVDLLGILSGIGLCGLVGTSRRSILAAYILLSMVDISAIYLEIRAVVFTVLNHERTHLLAQDYLACGSDPVAMVEAPAAVSPRSPSLSS 318
H+GEAQIAVVD+LG+LSGIGLC LVGTSR++I+AAY++LS+VDISAIY EIRAV F+VLNHERTHLL +D++A GSDP AM + P V PRSP SS
Sbjct: 347 HEGEAQIAVVDVLGMLSGIGLCTLVGTSRQTIVAAYVILSLVDISAIYNEIRAVCFSVLNHERTHLLVRDFVASGSDPSAMAQTP--VVPRSPYSSS 441
BLAST of mRNA_H-elongata_contig178572.4715.1 vs. uniprot
Match: A0A0G4G9L5_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4G9L5_9ALVE) HSP 1 Score: 88.2 bits (217), Expect = 3.800e-18 Identity = 48/74 (64.86%), Postives = 57/74 (77.03%), Query Frame = 1
Query: 10 NIEPSCHKGEAQIAVVDLLGILSGIGLCGLVGTSRRSILAAYILLSMVDISAIYLEIRAVVFTVLNHERTHLLA 231
NI KGEAQ+AVVDL+G+LSGI LC L+GT+ RSI AY+ LS VDIS IY EIR+VVF LN+ER+HL A
Sbjct: 504 NIGDITAKGEAQVAVVDLMGMLSGIALCRLIGTAPRSIALAYMCLSCVDISCIYKEIRSVVFRWLNNERSHLCA 577
BLAST of mRNA_H-elongata_contig178572.4715.1 vs. uniprot
Match: A0A7S2XVP0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVP0_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 2.540e-17 Identity = 45/76 (59.21%), Postives = 56/76 (73.68%), Query Frame = 1
Query: 37 EAQIAVVDLLGILSGIGLCGLVGTSRRSILAAYILLSMVDISAIYLEIRAVVFTVLNHERTHLLAQDYLACGSDPV 264
EAQIA+VDL+GI GI L ++GTSR + AY++LS VDI AIY EI+AVVF V+NHER LLAQ Y+ DP+
Sbjct: 1 EAQIAIVDLIGIFLGISLSKMIGTSRLGLGLAYLILSGVDIFAIYKEIQAVVFRVMNHERAVLLAQSYVMSSGDPL 76
BLAST of mRNA_H-elongata_contig178572.4715.1 vs. uniprot
Match: A0A7S2WMF6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WMF6_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 8.640e-15 Identity = 47/85 (55.29%), Postives = 58/85 (68.24%), Query Frame = 1
Query: 10 NIEPSCHKGEAQIAVVDLLGILSGIGLCGLVGTSRRSILAAYILLSMVDISAIYLEIRAVVFTVLNHERTHLLAQDYLACGSDPV 264
NI KGEAQIAVVDLLG++ GI L VGTSR SI Y++LS VDI +IY EIR+VVF LN ERT ++ + Y+A + V
Sbjct: 269 NIGEISAKGEAQIAVVDLLGMMFGICLSHAVGTSRLSIGLTYLVLSCVDIFSIYQEIRSVVFHTLNFERTGIVLRKYIASNASVV 353
BLAST of mRNA_H-elongata_contig178572.4715.1 vs. uniprot
Match: A0A7S3YC27_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YC27_HETAK) HSP 1 Score: 76.6 bits (187), Expect = 4.020e-14 Identity = 44/86 (51.16%), Postives = 56/86 (65.12%), Query Frame = 1
Query: 10 NIEPSCHKGEAQIAVVDLLGILSGIGLCGLVGTSRRSILAAYILLSMVDISAIYLEIRAVVFTVLNHERTHLLAQDYLACGSDPVA 267
NI KGEAQI++VDLLG+ +GI +GTS+ + AY+ S V++ AIY EIRAVVF LNHERT L A+ +L G P A
Sbjct: 284 NIGDITAKGEAQISLVDLLGMCAGIAASKAIGTSKAKLALAYLGCSAVELFAIYREIRAVVFRTLNHERTLLAAERFLQGGCAPAA 369
BLAST of mRNA_H-elongata_contig178572.4715.1 vs. uniprot
Match: A0A0G4FQL3_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FQL3_VITBC) HSP 1 Score: 75.9 bits (185), Expect = 7.960e-14 Identity = 41/78 (52.56%), Postives = 55/78 (70.51%), Query Frame = 1
Query: 10 NIEPSCHKGEAQIAVVDLLGILSGIGLCGLVGTSRRSILAAYILLSMVDISAIYLEIRAVVFTVLNHERTHLLAQDYL 243
NI KGEAQ+AVVDLLG+ GI L ++GT + SI AYI+LS +D+ AIY EIR+VVF LNHER +++ ++
Sbjct: 422 NIGDITAKGEAQVAVVDLLGMCFGITLSRMIGTGQASIGLAYIILSTIDMYAIYREIRSVVFRWLNHERANMVISQFV 499
BLAST of mRNA_H-elongata_contig178572.4715.1 vs. uniprot
Match: W7TAG4_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TAG4_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 3.720e-13 Identity = 44/85 (51.76%), Postives = 57/85 (67.06%), Query Frame = 1
Query: 10 NIEPSCHKGEAQIAVVDLLGILSGIGLCGLVGTSRRSILAAYILLSMVDISAIYLEIRAVVFTVLNHERTHLLAQDYLACGSDPV 264
N+ KGEAQIAVVDLLGIL GI L ++GT++ + AYI LS VD+ AIY EIR+VVF+ LN ER ++ Q + G + V
Sbjct: 390 NLGDITAKGEAQIAVVDLLGILLGIFLSKMIGTAQVGMAVAYIALSCVDVFAIYNEIRSVVFSSLNLERGAMVVQGFARQGPEGV 474
BLAST of mRNA_H-elongata_contig178572.4715.1 vs. uniprot
Match: A0A835YQZ5_9STRA (Vitamin B6 photo-protection and homoeostasis-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQZ5_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 1.910e-12 Identity = 42/65 (64.62%), Postives = 49/65 (75.38%), Query Frame = 1
Query: 10 NIEPSCHKGEAQIAVVDLLGILSGIGLCGLVGTSRRSILAAYILLSMVDISAIYLEIRAVVFTVL 204
NI KGEAQIA VDLLG++ GI L +GTSR SI AAY+LLS +DI AIY EIR+VVFT+L
Sbjct: 301 NIGDITAKGEAQIACVDLLGLMGGICLSKALGTSRVSIGAAYVLLSAIDIFAIYHEIRSVVFTML 365
BLAST of mRNA_H-elongata_contig178572.4715.1 vs. uniprot
Match: A0A7S3PX85_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PX85_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 2.390e-12 Identity = 35/78 (44.87%), Postives = 54/78 (69.23%), Query Frame = 1
Query: 10 NIEPSCHKGEAQIAVVDLLGILSGIGLCGLVGTSRRSILAAYILLSMVDISAIYLEIRAVVFTVLNHERTHLLAQDYL 243
N+ KGEAQ+A+VDL GI+SG+ L L+GTS RS++ +ILL + ++S +Y ++R VVF +LN ER ++ +L
Sbjct: 299 NLGDITAKGEAQVAIVDLFGIISGVCLSKLIGTSVRSVILIWILLQVFEVSCVYKQLRHVVFRMLNFERLSMVTNSFL 376
BLAST of mRNA_H-elongata_contig178572.4715.1 vs. uniprot
Match: A0A7S2YQJ9_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YQJ9_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 2.410e-12 Identity = 46/100 (46.00%), Postives = 61/100 (61.00%), Query Frame = 1
Query: 10 NIEPSCHKGEAQIAVVDLLGILSGIGLCGLVGTSRRSILAAYILLSMVDISAIYLEIRAVVFTVLNHERTHLLAQDYLACGSDP----VAMVEAPAAVSP 297
NI KGEAQIA+VDLLGI SG+ L +VGTS +S+L Y +L ++I +Y +IR VV+ VLN ER + +D+L P VA+V VSP
Sbjct: 327 NIGDITAKGEAQIAIVDLLGIGSGVTLSRVVGTSVQSVLGVYAVLQALEILCMYKQIRTVVYRVLNFERMAAVIEDFLDATLTPDGKSVAVVNGAETVSP 426 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig178572.4715.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig178572.4715.1 >prot_H-elongata_contig178572.4715.1 ID=prot_H-elongata_contig178572.4715.1|Name=mRNA_H-elongata_contig178572.4715.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=106bp MCANIEPSCHKGEAQIAVVDLLGILSGIGLCGLVGTSRRSILAAYILLSMback to top mRNA from alignment at H-elongata_contig178572:453..770+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig178572.4715.1 ID=mRNA_H-elongata_contig178572.4715.1|Name=mRNA_H-elongata_contig178572.4715.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=318bp|location=Sequence derived from alignment at H-elongata_contig178572:453..770+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig178572:453..770+ >mRNA_H-elongata_contig178572.4715.1 ID=mRNA_H-elongata_contig178572.4715.1|Name=mRNA_H-elongata_contig178572.4715.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=636bp|location=Sequence derived from alignment at H-elongata_contig178572:453..770+ (Himanthalia elongata Himel1 dioecious)back to top |