mRNA_H-elongata_contig17850.4708.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig17850.4708.1
Unique NamemRNA_H-elongata_contig17850.4708.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig17850.4708.1 vs. uniprot
Match: D8LMS2_ECTSI (Proteasome subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMS2_ECTSI)

HSP 1 Score: 283 bits (723), Expect = 8.850e-89
Identity = 138/162 (85.19%), Postives = 153/162 (94.44%), Query Frame = 1 
Query:  280 QVNGKLLCGFTGLWTDVMTVMQDLSFEVTIKAFAENNRPISPAALAGLLSTLLYAQRGSPFFVEPIVAGLDSRGRPFLCGQDILGACVEVDDFVVAGTSAQSLYGTCEAFFRVDMDREELFRAAARCLLSALERDCLSGYGAVVHLITQDGIETRELTTRMD 765
            +VNG+LLCGFTGLWTDV+TVMQDLS EV +K+ AE +RPI+PAALAGLLSTLLY++RGSP+FVEPIVAGLD RGRP+LCGQDILGA VEVDDFVVAGTSAQSLYGTCEAFFR  M+REELFR A+RCLLSALERDCLSGYGAVVHLIT++GIETRELTTRMD
Sbjct:   59 KVNGQLLCGFTGLWTDVLTVMQDLSSEVALKSLAEADRPIAPAALAGLLSTLLYSRRGSPWFVEPIVAGLDPRGRPYLCGQDILGAPVEVDDFVVAGTSAQSLYGTCEAFFRPGMEREELFRVASRCLLSALERDCLSGYGAVVHLITEEGIETRELTTRMD 220
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BLAST of mRNA_H-elongata_contig17850.4708.1 vs. uniprot
Match: A0A6H5JNZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNZ3_9PHAE)

HSP 1 Score: 197 bits (502), Expect = 1.930e-57
Identity = 101/142 (71.13%), Postives = 114/142 (80.28%), Query Frame = 1 
Query:  340 MQDLSFEVTIKAFAENNRPISPAALAGLLSTLLYAQRGSPFFVEPIVAGLDSRGRPFLCGQDILGACVEVDDFVVAGTSAQSLYGTCEAFFRVDMDREELFRAAARCLLSALERDCLSGYGAVVHLITQDGIETRELTTRMD 765
            MQDLS EV +K+ AE +RPI+PAALAGLLSTLLY++RGSP+FVEPIVAGLD RG+P+LCGQ                    SLYGTCEAFFR  M+REELFR A+RCLLSALERDCLSGYGAVVHLIT++GIETRELTTRMD
Sbjct:    1 MQDLSSEVALKSLAEADRPIAPAALAGLLSTLLYSRRGSPWFVEPIVAGLDPRGKPYLCGQ--------------------SLYGTCEAFFRPGMEREELFRVASRCLLSALERDCLSGYGAVVHLITEEGIETRELTTRMD 122
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BLAST of mRNA_H-elongata_contig17850.4708.1 vs. uniprot
Match: A0A2V3J6M2_9FLOR (Proteasome subunit beta n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6M2_9FLOR)

HSP 1 Score: 172 bits (437), Expect = 7.480e-47
Identity = 82/180 (45.56%), Postives = 127/180 (70.56%), Query Frame = 1 
Query:  238 KRIDKKLSTLPNNG----QVNGKLLCGFTGLWTDVMTVMQDLSFEVTIKAFAENNRPISPAALAGLLSTLLYAQRGSPFFVEPIVAGLDSRGRPFLCGQDILGACVEVDDFVVAGTSAQSLYGTCEAFFRVDMDREELFRAAARCLLSALERDCLSGYGAVVHLITQDGIETRELTTRMD 765
            KR+  +L+T+  +     +++ KL  G TGL TD+ T+ Q   F++ + A  EN R + P   A L+S+ LY++R +P+F EP++AGLD   +P++C  D+LG   E  +FVVAGT A+SL+GTCE F++ D++ +ELF   ++ LL+AL+RDC+SG+GAVVH+IT+DG++T+EL  RMD
Sbjct:   26 KRLGVQLTTVAMDANRIFRMHDKLYLGLTGLMTDIQTLDQLFRFKLELYAMREN-RLMKPKTFASLVSSTLYSKRFAPYFSEPVIAGLDKDNKPYICSMDLLGCVAEETEFVVAGTCAESLFGTCETFYKKDLEPDELFETVSQALLAALDRDCISGWGAVVHIITKDGVQTKELDGRMD 204
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BLAST of mRNA_H-elongata_contig17850.4708.1 vs. uniprot
Match: R7QTK3_CHOCR (Proteasome subunit beta n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QTK3_CHOCR)

HSP 1 Score: 171 bits (432), Expect = 3.930e-46
Identity = 81/161 (50.31%), Postives = 111/161 (68.94%), Query Frame = 1 
Query:  283 VNGKLLCGFTGLWTDVMTVMQDLSFEVTIKAFAENNRPISPAALAGLLSTLLYAQRGSPFFVEPIVAGLDSRGRPFLCGQDILGACVEVDDFVVAGTSAQSLYGTCEAFFRVDMDREELFRAAARCLLSALERDCLSGYGAVVHLITQDGIETRELTTRMD 765
            ++ KL  G TGL TD+ T+ Q   F + +    EN R I P   + L+S+ LY +R  P+F EP++AGLD   +PFLC  D+LG   E DDF VAGT A+SL GTCE F+R +++ E+LF   ++ LL+AL+RDC+SG+GAVVH+IT+DG+ TREL  RMD
Sbjct:   45 MHDKLYLGLTGLMTDITTLDQLFRFRLEMYEMREN-RKIKPKTFSNLVSSTLYGKRFGPYFSEPVIAGLDKDNKPFLCSMDLLGCIAEADDFAVAGTCAESLLGTCETFYRPNLEPEDLFETVSQSLLAALDRDCISGWGAVVHIITKDGVTTRELDGRMD 204
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BLAST of mRNA_H-elongata_contig17850.4708.1 vs. uniprot
Match: A0A835YVV6_9STRA (Proteasome beta subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVV6_9STRA)

HSP 1 Score: 167 bits (423), Expect = 1.950e-44
Identity = 87/158 (55.06%), Postives = 109/158 (68.99%), Query Frame = 1 
Query:  280 QVNGKLLCGFTGLWTDVMTVMQDLSFEVTIKAFAENNRPISPAALAGLLSTLLYAQRGSPFFVEPIVAGLDSRGRPFLCGQDILGACVEVDD-FVVAGTSAQSLYGTCEAFFRVDMDREELFRAAARCLLSALERDCLSGYGAVVHLITQDGIETREL 750
            +++ +LLC FTGL TDV T+MQDL+         E  RP+ PAA A LLS++LYA+R SP+F E IVAGL      F+   D+LGA    +D F V GTSA+SLYG CEAF+R DM  EEL   A  CL++ALERDCLSG+G VVHL+T+ GI +REL
Sbjct:   74 KLHSRLLCAFTGLTTDVQTLMQDLAAAAASYTITEG-RPLQPAAAAALLSSMLYARRRSPYFCETIVAGLTRSAEAFVRSHDVLGAAGGAEDGFAVMGTSAESLYGLCEAFYRPDMTPEELADTAEHCLVAALERDCLSGHGVVVHLLTEQGISSREL 230
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BLAST of mRNA_H-elongata_contig17850.4708.1 vs. uniprot
Match: A0A3P3Y3V5_PLABS (Proteasome subunit beta n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3Y3V5_PLABS)

HSP 1 Score: 166 bits (420), Expect = 2.090e-44
Identity = 75/162 (46.30%), Postives = 116/162 (71.60%), Query Frame = 1 
Query:  280 QVNGKLLCGFTGLWTDVMTVMQDLSFEVTIKAFAENNRPISPAALAGLLSTLLYAQRGSPFFVEPIVAGLDSRGRPFLCGQDILGACVEVDDFVVAGTSAQSLYGTCEAFFRVDMDREELFRAAARCLLSALERDCLSGYGAVVHLITQDGIETRELTTRMD 765
            +++ +L  G +GL TD+ TV   L F++ +    E  R I P   A L+ST+LY++R  P+FVEP+VAG+D +G+PF+C  D++GA V  +DFVV+GT+++ LYGTCE+ +  ++  EELF   ++ LL+A++RDCLSG+GA VH+IT+DG+ +R+L  R D
Sbjct:   44 KMHDRLYVGLSGLATDMQTVRNTLQFQLKLYKLREE-REIEPHVFANLVSTMLYSKRFGPYFVEPVVAGIDKKGKPFICAMDLIGAPVFAEDFVVSGTASEELYGTCESLYTPNLGPEELFETVSQALLAAVDRDCLSGWGATVHIITKDGVTSRKLKCRQD 204
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BLAST of mRNA_H-elongata_contig17850.4708.1 vs. uniprot
Match: A0A1X6NP67_PORUM (Proteasome subunit beta n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NP67_PORUM)

HSP 1 Score: 166 bits (420), Expect = 2.090e-44
Identity = 83/180 (46.11%), Postives = 117/180 (65.00%), Query Frame = 1 
Query:  238 KRIDKKLSTLPNNGQ----VNGKLLCGFTGLWTDVMTVMQDLSFEVTIKAFAENNRPISPAALAGLLSTLLYAQRGSPFFVEPIVAGLDSRGRPFLCGQDILGACVEVDDFVVAGTSAQSLYGTCEAFFRVDMDREELFRAAARCLLSALERDCLSGYGAVVHLITQDGIETRELTTRMD 765
            KR+  +LST+  +      +   L  G TGL TDV T+    +F++ + A  E  R I P   A L+S+ LY +R  P+F EP++AGL + G PFLC  D+LGA    DDFVV+GT A+SL+GTCE FFR DM+ +ELF    + L++AL+RDC+SG+G  VH+IT++G+ T+ L  RMD
Sbjct:   26 KRLGVQLSTIAMDCNRVFPMTDSLYLGLTGLHTDVTTLHNLFNFKLNLYAMREG-RTIKPTTFASLVSSTLYEKRFGPYFAEPVIAGLQADGTPFLCAMDLLGAMAVADDFVVSGTCAESLFGTCETFFRKDMNPDELFETLGQSLMAALDRDCISGWGVDVHIITKEGVTTKSLKARMD 204
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BLAST of mRNA_H-elongata_contig17850.4708.1 vs. uniprot
Match: A0A0H5R549_9EUKA (Proteasome subunit beta n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R549_9EUKA)

HSP 1 Score: 166 bits (419), Expect = 2.900e-44
Identity = 77/162 (47.53%), Postives = 111/162 (68.52%), Query Frame = 1 
Query:  280 QVNGKLLCGFTGLWTDVMTVMQDLSFEVTIKAFAENNRPISPAALAGLLSTLLYAQRGSPFFVEPIVAGLDSRGRPFLCGQDILGACVEVDDFVVAGTSAQSLYGTCEAFFRVDMDREELFRAAARCLLSALERDCLSGYGAVVHLITQDGIETRELTTRMD 765
            +++ +L  G +GL TD+ TV   L F + +    E  R I P   + +LST+LY +R  P+FVEP+VAG+D  G+PF+C  D+LGA V  DDFVV+GT+ + LYGTCE+ +  ++  +ELF   ++ LL+A +RDCLSG+GAVVH++T+D I TR L TR D
Sbjct:   44 KMHDRLYVGLSGLSTDMQTVRNRLEFRLKMYKLREE-REIEPKVFSNMLSTMLYEKRFGPYFVEPVVAGIDKAGKPFICAMDLLGAAVYADDFVVSGTTGEELYGTCESLYSPNLSPDELFETVSQALLAACDRDCLSGWGAVVHILTKDNITTRVLKTRQD 204
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BLAST of mRNA_H-elongata_contig17850.4708.1 vs. uniprot
Match: A0A7S2XNS4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XNS4_9STRA)

HSP 1 Score: 166 bits (419), Expect = 2.900e-44
Identity = 79/162 (48.77%), Postives = 113/162 (69.75%), Query Frame = 1 
Query:  280 QVNGKLLCGFTGLWTDVMTVMQDLSFEVTIKAFAENNRPISPAALAGLLSTLLYAQRGSPFFVEPIVAGLDSRGRPFLCGQDILGACVEVDDFVVAGTSAQSLYGTCEAFFRVDMDREELFRAAARCLLSALERDCLSGYGAVVHLITQDGIETRELTTRMD 765
            ++N +L CG  GL +DV T+ Q L F   +    E  R ++P   + LLSTLLY +R  P+FVEPIVAGLD++G+PFL G D++GA V  DDFVV+GT   ++YG CE  ++ DM+ ++LF   A+ LL++++RD LSG+G VVH+IT+DG+ +REL  R D
Sbjct:   44 KMNDRLFCGLAGLASDVQTLDQLLKFRQNLYELREE-REMTPEVFSNLLSTLLYEKRFGPYFVEPIVAGLDNKGKPFLSGMDLIGAPVYTDDFVVSGTCTGNMYGMCETLYKPDMEPDQLFETLAQALLASVDRDALSGWGGVVHIITKDGVTSRELKGRQD 204
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BLAST of mRNA_H-elongata_contig17850.4708.1 vs. uniprot
Match: M2W804_GALSU (Proteasome subunit beta n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W804_GALSU)

HSP 1 Score: 163 bits (412), Expect = 3.110e-43
Identity = 78/162 (48.15%), Postives = 115/162 (70.99%), Query Frame = 1 
Query:  280 QVNGKLLCGFTGLWTDVMTVMQDLSFEVTIKAFAENNRPISPAALAGLLSTLLYAQRGSPFFVEPIVAGLDSRGRPFLCGQDILGACVEVDDFVVAGTSAQSLYGTCEAFFRVDMDREELFRAAARCLLSALERDCLSGYGAVVHLITQDGIETRELTTRMD 765
            ++N +L+ G TGL TDV T+       + +    E  R I PA+ A ++++ LY++R SP+FVEP+VAGL  +G P+LC QD+LGA +  +DFVV+GT A+SLYGT E F++ ++   ELF   ++ LL+A++RDCLSG+GA+VH+IT +GIET+ L  RMD
Sbjct:   46 KINDRLMLGLTGLRTDVTTLYNRFVQRLNLYRLREE-REIKPASFANMVASTLYSRRFSPYFVEPVVAGLTEKGEPYLCAQDLLGAPLFAEDFVVSGTCAESLYGTSETFWKPNLSPAELFEVTSQSLLAAVDRDCLSGWGAIVHMITLNGIETKVLKARMD 206
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17850.4708.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMS2_ECTSI8.850e-8985.19Proteasome subunit beta n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JNZ3_9PHAE1.930e-5771.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2V3J6M2_9FLOR7.480e-4745.56Proteasome subunit beta n=1 Tax=Gracilariopsis cho... [more]
R7QTK3_CHOCR3.930e-4650.31Proteasome subunit beta n=1 Tax=Chondrus crispus T... [more]
A0A835YVV6_9STRA1.950e-4455.06Proteasome beta subunit n=1 Tax=Tribonema minus Ta... [more]
A0A3P3Y3V5_PLABS2.090e-4446.30Proteasome subunit beta n=2 Tax=Plasmodiophora bra... [more]
A0A1X6NP67_PORUM2.090e-4446.11Proteasome subunit beta n=1 Tax=Porphyra umbilical... [more]
A0A0H5R549_9EUKA2.900e-4447.53Proteasome subunit beta n=1 Tax=Spongospora subter... [more]
A0A7S2XNS4_9STRA2.900e-4448.77Hypothetical protein n=1 Tax=Attheya septentrional... [more]
M2W804_GALSU3.110e-4348.15Proteasome subunit beta n=1 Tax=Galdieria sulphura... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17850contigH-elongata_contig17850:2798..5113 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score248.4
Seed ortholog evalue2e-63
Seed eggNOG ortholog2880.D8LMS2
Preferred namePBC1
KEGG koko:K02735,ko:K03660
KEGG Pathwayko03050,ko03410,map03050,map03410
KEGG ModuleM00337,M00340
GOsGO:0000502,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005773,GO:0005774,GO:0005783,GO:0005789,GO:0005829,GO:0005839,GO:0006508,GO:0006511,GO:0006807,GO:0008047,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009893,GO:0009987,GO:0010498,GO:0010499,GO:0010604,GO:0010950,GO:0010952,GO:0012505,GO:0016020,GO:0016504,GO:0019222,GO:0019538,GO:0019774,GO:0019941,GO:0030162,GO:0030163,GO:0030234,GO:0031090,GO:0031323,GO:0031325,GO:0031597,GO:0031984,GO:0032268,GO:0032270,GO:0032991,GO:0034515,GO:0042175,GO:0043085,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043632,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045862,GO:0048518,GO:0048522,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051336,GO:0051345,GO:0051603,GO:0052547,GO:0052548,GO:0060255,GO:0061133,GO:0061134,GO:0061135,GO:0065007,GO:0065009,GO:0071704,GO:0080090,GO:0098588,GO:0098772,GO:0098805,GO:0098827,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1905368,GO:1905369
EggNOG free text desc.threonine-type endopeptidase activity
EggNOG OGsCOG0638@1,KOG0180@2759
EC3.4.25.1,4.2.99.18
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko03051,ko03400
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionNucleophile aminohydrolases, N-terminal
Ec32 orthologEc-02_003440.1
Exons3
Model size1766
Cds size438
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17850.4708.1prot_H-elongata_contig17850.4708.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig17850 3822..4783 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930030.5933444-UTR-H-elongata_contig17850:2797..32981622930030.5933444-UTR-H-elongata_contig17850:2797..3298Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17850 2798..3298 -
1691679253.5442755-UTR-H-elongata_contig17850:2797..32981691679253.5442755-UTR-H-elongata_contig17850:2797..3298Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17850 2798..3298 -
1622930030.6058948-UTR-H-elongata_contig17850:3324..38211622930030.6058948-UTR-H-elongata_contig17850:3324..3821Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17850 3325..3821 -
1691679253.5618134-UTR-H-elongata_contig17850:3324..38211691679253.5618134-UTR-H-elongata_contig17850:3324..3821Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17850 3325..3821 -
1622930030.6509244-UTR-H-elongata_contig17850:4783..51131622930030.6509244-UTR-H-elongata_contig17850:4783..5113Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17850 4784..5113 -
1691679253.6023216-UTR-H-elongata_contig17850:4783..51131691679253.6023216-UTR-H-elongata_contig17850:4783..5113Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17850 4784..5113 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930030.629124-CDS-H-elongata_contig17850:3821..40671622930030.629124-CDS-H-elongata_contig17850:3821..4067Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17850 3822..4067 -
1691679253.578847-CDS-H-elongata_contig17850:3821..40671691679253.578847-CDS-H-elongata_contig17850:3821..4067Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17850 3822..4067 -
1622930030.6399317-CDS-H-elongata_contig17850:4591..47831622930030.6399317-CDS-H-elongata_contig17850:4591..4783Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17850 4592..4783 -
1691679253.5909247-CDS-H-elongata_contig17850:4591..47831691679253.5909247-CDS-H-elongata_contig17850:4591..4783Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17850 4592..4783 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig17850.4708.1

>prot_H-elongata_contig17850.4708.1 ID=prot_H-elongata_contig17850.4708.1|Name=mRNA_H-elongata_contig17850.4708.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=146bp
MTVMQDLSFEVTIKAFAENNRPISPAALAGLLSTLLYAQRGSPFFVEPIV
AGLDSRGRPFLCGQDILGACVEVDDFVVAGTSAQSLYGTCEAFFRVDMDR
EELFRAAARCLLSALERDCLSGYGAVVHLITQDGIETRELTTRMD*
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mRNA from alignment at H-elongata_contig17850:2798..5113-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig17850.4708.1 ID=mRNA_H-elongata_contig17850.4708.1|Name=mRNA_H-elongata_contig17850.4708.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2316bp|location=Sequence derived from alignment at H-elongata_contig17850:2798..5113- (Himanthalia elongata Himel1 dioecious)
GAGACGGGATTGCTGAACCCGTCTCGCGAGACCAAATTCTCAGGCGTGAA
CGGGTGCAGGAAAAAAGAAATCCCTGTTTAGCTGGCCACAAGCAGGAGGC
AACCAAATCCGCTTGATCCCTAACCTGCTATATGCAATGACCACACAGAA
CCGCGATGAAATACCATTTCCTTCGTTTCCTTGAAGCGGATTTATCGTGC
AACGCGACGCTCCAGTTCTTGCACGCCTACCCCTAGAAAACGAATTGATA
AGAAACTGAGCACTCTGCCCAATAATGGCCAGGTCAACGGGAAACTCCTG
TGCGGATTCACGGGGCTGTGGACGGACGTGATGACGGTGATGCAAGATTT
GTCGTTCGAGGTGACCATCAAGGCCTTCGCAGAAAACAATCGGCCAATAT
CACCGGCGGCGCTTGCGGGGCTCCTCTCCACCCTGCTCTACGCTCAACGC
GGGAGCCCATTTTTCGTCGAGCCGATAGTTGCCGGTTTAGATTCACGAGG
AAGGCCCTTTCTGTGTGGACAGGTGGGGCCTTATCGCCGGGCGTGGGATT
GTGTCTAATATTACTGTTGCGAGTGTCACCTTTCTCGGCGAGAGTCCGCG
GCTTTTCCCGAGCCCTCGAGCCATAAGCAAGCCATTTCATTTCCTCCCGA
TGTGCTCAAAAACCGCGGTGTGGGAGGGAAGAGATGCGTAAGACTAAACC
GCCTCCACATTTATTAATATTATTAGTATGATCTGACTGATTTTTTTTTG
TGGTAGAATCGTCGTAGAGCTATGTATCTACAACATTCATAAATAAATCG
TCGCCATCTTCGATGTAGTGGCATTAATTGTAAAACATATTTCCACGGTG
TTTACGATGAGATGTTAGGTTACGGTTCTTATTAACAGACCACGGTCGTC
CAGTTTTTCTGCCACAACTGACATATCACATCAATCAACAAAACGAAAAT
TTTCCTCTACAAGCACCCTCGTCAACATCCAAGCCCCGTGGACATTCTCA
CAGTAATACCCTCTCCCGCTTTTTGTTTAACTCACCCCGCCACAAGGATA
TATTGGGAGCTTGCGTCGAAGTGGACGATTTTGTGGTGGCCGGCACCTCG
GCACAGTCGCTCTACGGCACCTGCGAGGCATTCTTCCGAGTGGACATGGA
CAGAGAAGAGCTATTCCGAGCGGCGGCGCGGTGCCTTTTGTCTGCGCTCG
AGCGGGACTGCCTGAGTGGCTACGGGGCGGTGGTGCACCTCATCACCCAA
GACGGAATAGAAACGCGCGAGCTGACAACCCGCATGGATTGATATTTCTC
GGGCGTTTGGAATAAAAAACGGCGGGCGTCAGGGCTGCAAAAGCCCTCTT
TTATATTTTGTAATCTTACATTGCTTACTAAGGAATATGATTCTCGAACT
GGATTTTAATTTTTATGTTGAATTTAGTATTAAAAAACAGATCGAGTTCC
ATTGGGGTTAAATATGAACTTCTAGTAAACCGGTTCAAGTTTTTTTTAAT
AATCTTAACCCGAGAGGACGTTTTAAGAGAGCATCTATCGTATCCCGAAT
ATATAGGGTTTAGAAAGGCTGTTGGTGGAATCAAGAGCGCTGGAGGTGAC
GCTTTTGGCGAGGTGTCTCCAAGTGTATTGAAGAATTGTTTGGCATCGTA
TCTTTATTATCGTGTTCTTGTACGTTGCAGGAGTTGCCTACAAAGCAATT
TGTGCTTGTTTTTGTTTCTGATTTATCGCTCCCTCTTTTTCCACCAATAA
AGGGTGCTCAACCCAATCTTCATCTTCTCTGCAACTGGCTACGCCAGTCA
CGGACTTGAATATTCAATAACTCGAGCGCTTCAGGCTTTTAGACAAACGT
TAGTCGTTCGCGGTTGTGTCCACACGTTTCATGATGCTACGTGCACCCTC
TGGGGCAGTGACGCTTCGCAGCCCCAACTTGCGGGCTGTGGAAGTGATAG
GGTGACAAACGCGATGTATCTCTTTGTCCGAAAGCGCATCCTTCACACCG
CACAGTCCACGAAGCAAGTCTCCACAGAGAGGGCATACATATGTGGTTCG
TGAAATATGGAGGACCAGGTGCGTGGTCCGGCTTCAACGCGAAGAGCGAA
CTTGCTGCGCAGGGCATCGTGCTGCAGCCTATCACTCTATTAACTGTTAC
TACTGGTACTCTGGAAATCTCGCACACTATCGCGTGTTTTGGGCCGGGCT
GTTTGGATGTTCACGTGTTCGCATGATTTCCAATATGTTCCTAGAGCGGG
CATGAATGAGGTTCGGTTTCACCCCTATGGAACTCAATCTGTTTTTTTAC
ATTCTAAATTCAATAT
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Coding sequence (CDS) from alignment at H-elongata_contig17850:2798..5113-

>mRNA_H-elongata_contig17850.4708.1 ID=mRNA_H-elongata_contig17850.4708.1|Name=mRNA_H-elongata_contig17850.4708.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=876bp|location=Sequence derived from alignment at H-elongata_contig17850:2798..5113- (Himanthalia elongata Himel1 dioecious)
ATGACGGTGATGCAAGATTTGTCGTTCGAGGTGACCATCAAGGCCTTCGC
AGAAAACAATCGGCCAATATCACCGGCGGCGCTTGCGGGGCTCCTCTCCA
CCCTGCTCTACGCTCAACGCGGGAGCCCATTTTTCGTCGAGCCGATAGTT
GCCGGTTTAGATTCACGAGGAAGGCCCTTTCTGTGTGGACAGATGACGGT
GATGCAAGATTTGTCGTTCGAGGTGACCATCAAGGCCTTCGCAGAAAACA
ATCGGCCAATATCACCGGCGGCGCTTGCGGGGCTCCTCTCCACCCTGCTC
TACGCTCAACGCGGGAGCCCATTTTTCGTCGAGCCGATAGTTGCCGGTTT
AGATTCACGAGGAAGGCCCTTTCTGTGTGGACAGGATATATTGGGAGCTT
GCGTCGAAGTGGACGATTTTGTGGTGGCCGGCACCTCGGCACAGTCGCTC
TACGGCACCTGCGAGGCATTCTTCCGAGTGGACATGGACAGAGAAGAGCT
ATTCCGAGCGGCGGCGCGGTGCCTTTTGTCTGCGCTCGAGCGGGACTGCC
TGAGTGGCTACGGGGCGGTGGTGCACCTCATCACCCAAGACGGAATAGAA
ACGCGCGAGCTGACAACCCGCATGGATTGAGATATATTGGGAGCTTGCGT
CGAAGTGGACGATTTTGTGGTGGCCGGCACCTCGGCACAGTCGCTCTACG
GCACCTGCGAGGCATTCTTCCGAGTGGACATGGACAGAGAAGAGCTATTC
CGAGCGGCGGCGCGGTGCCTTTTGTCTGCGCTCGAGCGGGACTGCCTGAG
TGGCTACGGGGCGGTGGTGCACCTCATCACCCAAGACGGAATAGAAACGC
GCGAGCTGACAACCCGCATGGATTGA
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