prot_H-elongata_contig177928.4687.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig177928.4687.1
Unique Nameprot_H-elongata_contig177928.4687.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length115
Homology
BLAST of mRNA_H-elongata_contig177928.4687.1 vs. uniprot
Match: A0A6H5JS11_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JS11_9PHAE)

HSP 1 Score: 191 bits (484), Expect = 3.480e-57
Identity = 89/114 (78.07%), Postives = 100/114 (87.72%), Query Frame = 0
Query:    1 CLCPRADFGGVEVGPKEDKLGIRASSTCPVTFSGCEVPADNVLGEVGRGYKYAIEILNEGRIGIGAQMLGLSRGCMDATLPYLFERKQFGQMVGDFQGMQHQIAQVSTDIEAAA 114
            C      FGGV VGPKE+KLGIRASSTCPVTFSGCEVPA NVLGEVG+GY+YAIEILNEGRIGIGAQM GL+ GC+ AT+PYLFERKQFG  VGDFQGMQHQ+AQ +T++EAA+
Sbjct:  209 CFIVEKGFGGVTVGPKEEKLGIRASSTCPVTFSGCEVPATNVLGEVGQGYRYAIEILNEGRIGIGAQMAGLAEGCLSATVPYLFERKQFGGFVGDFQGMQHQVAQAATEVEAAS 322          
BLAST of mRNA_H-elongata_contig177928.4687.1 vs. uniprot
Match: A0A812ZQI9_9DINO (ACADSB protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812ZQI9_9DINO)

HSP 1 Score: 171 bits (432), Expect = 2.920e-50
Identity = 76/113 (67.26%), Postives = 96/113 (84.96%), Query Frame = 0
Query:    1 CLCPRADFGGVEVGPKEDKLGIRASSTCPVTFSGCEVPADNVLGEVGRGYKYAIEILNEGRIGIGAQMLGLSRGCMDATLPYLFERKQFGQMVGDFQGMQHQIAQVSTDIEAA 113
            C     DF G+EVG KEDKLGIRASSTCP+TF+  +VP +N++GE+G+GYK AIEILNEGRIGI +QMLG++ GCM+ATLPYL++RKQF   +GDFQGMQHQ+AQ++ +IEAA
Sbjct:  129 CFLAERDFEGLEVGKKEDKLGIRASSTCPITFTDMKVPKENIVGEIGKGYKIAIEILNEGRIGIASQMLGIAEGCMEATLPYLWQRKQFNNYIGDFQGMQHQVAQIAMEIEAA 241          
BLAST of mRNA_H-elongata_contig177928.4687.1 vs. uniprot
Match: A0A835ZGF4_9STRA (Acyl-CoA dehydrogenase/oxidase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGF4_9STRA)

HSP 1 Score: 171 bits (433), Expect = 7.700e-50
Identity = 80/105 (76.19%), Postives = 93/105 (88.57%), Query Frame = 0
Query:    9 GGVEVGPKEDKLGIRASSTCPVTFSGCEVPADNVLGEVGRGYKYAIEILNEGRIGIGAQMLGLSRGCMDATLPYLFERKQFGQMVGDFQGMQHQIAQVSTDIEAA 113
            GG+ VG KEDKLGIRASSTCPVTF  C+VPA+NVLG+VG+GYKYAI+ILNEGRIGIGAQM+GLS GC +  +PYLFERKQFG  +GDFQ +QHQ AQ++TDIEAA
Sbjct:  191 GGISVGRKEDKLGIRASSTCPVTFHDCKVPAENVLGQVGQGYKYAIQILNEGRIGIGAQMVGLSLGCFEHVMPYLFERKQFGTHIGDFQAVQHQYAQMATDIEAA 295          
BLAST of mRNA_H-elongata_contig177928.4687.1 vs. uniprot
Match: A0A7S1G4M3_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G4M3_9STRA)

HSP 1 Score: 166 bits (421), Expect = 1.390e-47
Identity = 77/113 (68.14%), Postives = 93/113 (82.30%), Query Frame = 0
Query:    1 CLCPRADFGGVEVGPKEDKLGIRASSTCPVTFSGCEVPADNVLGEVGRGYKYAIEILNEGRIGIGAQMLGLSRGCMDATLPYLFERKQFGQMVGDFQGMQHQIAQVSTDIEAA 113
            C     +  GVE+G KEDKLGIRASSTCP++F+  EVP +NV+GE+G+GYK AIEILNEGRIGIGAQMLG+++G  DAT+PYL +RKQFG  +GDFQGMQHQ AQ + DIEAA
Sbjct:  232 CFLVDREMAGVEIGKKEDKLGIRASSTCPISFTDVEVPKENVVGEIGKGYKIAIEILNEGRIGIGAQMLGIAQGAFDATMPYLQQRKQFGTRIGDFQGMQHQYAQAAVDIEAA 344          
BLAST of mRNA_H-elongata_contig177928.4687.1 vs. uniprot
Match: A0A137P627_CONC2 (Acyl-CoA dehydrogenase NM domain-like protein n=1 Tax=Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638) TaxID=796925 RepID=A0A137P627_CONC2)

HSP 1 Score: 162 bits (411), Expect = 3.230e-46
Identity = 77/104 (74.04%), Postives = 89/104 (85.58%), Query Frame = 0
Query:   10 GVEVGPKEDKLGIRASSTCPVTFSGCEVPADNVLGEVGRGYKYAIEILNEGRIGIGAQMLGLSRGCMDATLPYLFERKQFGQMVGDFQGMQHQIAQVSTDIEAA 113
            G++VG KEDKLGIRASSTC +TF    VPA N+LGE G+GYKYAIEILNEGRIGI AQMLGL++G  D TLPYLFERKQFG+ +G+FQGMQHQ AQ +T+IEAA
Sbjct:  227 GIQVGKKEDKLGIRASSTCSLTFEDVRVPASNILGEYGKGYKYAIEILNEGRIGIAAQMLGLAQGVFDQTLPYLFERKQFGEAIGNFQGMQHQYAQAATEIEAA 330          
BLAST of mRNA_H-elongata_contig177928.4687.1 vs. uniprot
Match: A0A812JD34_9DINO (Acadsb protein n=3 Tax=Sar TaxID=2698737 RepID=A0A812JD34_9DINO)

HSP 1 Score: 162 bits (409), Expect = 6.920e-46
Identity = 78/113 (69.03%), Postives = 89/113 (78.76%), Query Frame = 0
Query:    1 CLCPRADFGGVEVGPKEDKLGIRASSTCPVTFSGCEVPADNVLGEVGRGYKYAIEILNEGRIGIGAQMLGLSRGCMDATLPYLFERKQFGQMVGDFQGMQHQIAQVSTDIEAA 113
            C     D  G  VG KEDKLGIRASSTCP+T  G +VP + V+GEVG+GYK AIEILNEGRIGI +QMLG+++G  DATLPYLFERKQFG  +GDFQGMQHQ AQV  +IEAA
Sbjct:  223 CFLVERDQEGFSVGKKEDKLGIRASSTCPLTLEGVKVPKNRVVGEVGKGYKIAIEILNEGRIGIASQMLGIAQGAFDATLPYLFERKQFGSAIGDFQGMQHQYAQVGMEIEAA 335          
BLAST of mRNA_H-elongata_contig177928.4687.1 vs. uniprot
Match: A0A7S3LNX8_9STRA (Hypothetical protein n=2 Tax=Sar TaxID=2698737 RepID=A0A7S3LNX8_9STRA)

HSP 1 Score: 161 bits (408), Expect = 7.620e-46
Identity = 75/113 (66.37%), Postives = 92/113 (81.42%), Query Frame = 0
Query:    1 CLCPRADFGGVEVGPKEDKLGIRASSTCPVTFSGCEVPADNVLGEVGRGYKYAIEILNEGRIGIGAQMLGLSRGCMDATLPYLFERKQFGQMVGDFQGMQHQIAQVSTDIEAA 113
            C      F G+EVG +EDKLGIRASSTCP+TF+   +P +NVLGE+G+GYKYAIEILNEGRIGIGAQM+GL++G  D T+PYL ERKQFGQ +G+FQ MQHQ A+ + +IEAA
Sbjct:  213 CFVAEKGFEGLEVGNREDKLGIRASSTCPITFTDVVIPKNNVLGEIGKGYKYAIEILNEGRIGIGAQMVGLAQGTFDLTMPYLQERKQFGQPIGNFQAMQHQYAEAAVEIEAA 325          
BLAST of mRNA_H-elongata_contig177928.4687.1 vs. uniprot
Match: A0A7S0NQ50_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NQ50_9EUKA)

HSP 1 Score: 161 bits (407), Expect = 2.100e-45
Identity = 76/113 (67.26%), Postives = 92/113 (81.42%), Query Frame = 0
Query:    1 CLCPRADFGGVEVGPKEDKLGIRASSTCPVTFSGCEVPADNVLGEVGRGYKYAIEILNEGRIGIGAQMLGLSRGCMDATLPYLFERKQFGQMVGDFQGMQHQIAQVSTDIEAA 113
            C     D  G+ VG KEDKLGIRASSTC VTF G  VP + +LGE+G+GYKYAIEILNEGRIGIGAQM+GL++G +D TLPYL ER+QFGQ V DFQG+QHQ+AQ++T++ AA
Sbjct:  246 CFVVPRDAPGLSVGMKEDKLGIRASSTCTVTFDGVRVPEEAILGELGKGYKYAIEILNEGRIGIGAQMVGLAQGALDLTLPYLHERRQFGQRVADFQGVQHQVAQMATELHAA 358          
BLAST of mRNA_H-elongata_contig177928.4687.1 vs. uniprot
Match: A0A2R5G2F8_9STRA (Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial n=2 Tax=Thraustochytriaceae TaxID=33674 RepID=A0A2R5G2F8_9STRA)

HSP 1 Score: 160 bits (405), Expect = 2.170e-45
Identity = 76/113 (67.26%), Postives = 89/113 (78.76%), Query Frame = 0
Query:    1 CLCPRADFGGVEVGPKEDKLGIRASSTCPVTFSGCEVPADNVLGEVGRGYKYAIEILNEGRIGIGAQMLGLSRGCMDATLPYLFERKQFGQMVGDFQGMQHQIAQVSTDIEAA 113
            C        G EVG KE+KLGIRASSTCP+TF+   VP +NVLGE+G+GYKYAIEILNEGRIGI AQ LG+++G  DATLPYL ERKQFG  +GDFQ MQHQ+AQ + +IEAA
Sbjct:  212 CFIMERGMEGFEVGKKENKLGIRASSTCPLTFTDVVVPKENVLGEIGKGYKYAIEILNEGRIGIAAQCLGMAQGAFDATLPYLHERKQFGSFIGDFQAMQHQVAQCAVEIEAA 324          
BLAST of mRNA_H-elongata_contig177928.4687.1 vs. uniprot
Match: A0A482RE16_9ARCH (Acyl-CoA_dh_1 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RE16_9ARCH)

HSP 1 Score: 155 bits (391), Expect = 2.360e-45
Identity = 74/98 (75.51%), Postives = 83/98 (84.69%), Query Frame = 0
Query:   16 KEDKLGIRASSTCPVTFSGCEVPADNVLGEVGRGYKYAIEILNEGRIGIGAQMLGLSRGCMDATLPYLFERKQFGQMVGDFQGMQHQIAQVSTDIEAA 113
            KEDKLGIRASSTCPVTF   +VPA NV+GEVG+GYK AIEILNEGRIGI AQMLG++ G  DA +PYLFERKQFG  +G+FQGMQHQ AQ + DIEAA
Sbjct:   35 KEDKLGIRASSTCPVTFEDLKVPASNVIGEVGKGYKIAIEILNEGRIGIAAQMLGIAEGAYDAAMPYLFERKQFGSHIGEFQGMQHQYAQAAVDIEAA 132          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig177928.4687.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JS11_9PHAE3.480e-5778.07Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A812ZQI9_9DINO2.920e-5067.26ACADSB protein n=1 Tax=Symbiodinium sp. KB8 TaxID=... [more]
A0A835ZGF4_9STRA7.700e-5076.19Acyl-CoA dehydrogenase/oxidase (Fragment) n=1 Tax=... [more]
A0A7S1G4M3_9STRA1.390e-4768.14Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A137P627_CONC23.230e-4674.04Acyl-CoA dehydrogenase NM domain-like protein n=1 ... [more]
A0A812JD34_9DINO6.920e-4669.03Acadsb protein n=3 Tax=Sar TaxID=2698737 RepID=A0A... [more]
A0A7S3LNX8_9STRA7.620e-4666.37Hypothetical protein n=2 Tax=Sar TaxID=2698737 Rep... [more]
A0A7S0NQ50_9EUKA2.100e-4567.26Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A2R5G2F8_9STRA2.170e-4567.26Short/branched chain specific acyl-CoA dehydrogena... [more]
A0A482RE16_9ARCH2.360e-4575.51Acyl-CoA_dh_1 domain-containing protein n=1 Tax=ar... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009075Acyl-CoA dehydrogenase/oxidase C-terminalPFAMPF00441Acyl-CoA_dh_1coord: 47..113
e-value: 1.2E-15
score: 58.1
NoneNo IPR availableGENE3D2.40.110.10coord: 1..51
e-value: 1.6E-12
score: 49.3
NoneNo IPR availableGENE3D1.20.140.10coord: 52..114
e-value: 4.3E-18
score: 67.7
NoneNo IPR availablePANTHERPTHR43884:SF1SHORT/BRANCHED CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIALcoord: 6..113
NoneNo IPR availablePANTHERPTHR43884FAMILY NOT NAMEDcoord: 6..113
IPR009100Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamilySUPERFAMILY56645Acyl-CoA dehydrogenase NM domain-likecoord: 7..60
IPR036250Acyl-CoA dehydrogenase-like, C-terminalSUPERFAMILY47203Acyl-CoA dehydrogenase C-terminal domain-likecoord: 45..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig177928contigH-elongata_contig177928:251..1193 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig177928.4687.1mRNA_H-elongata_contig177928.4687.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig177928 251..1193 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig177928.4687.1 ID=prot_H-elongata_contig177928.4687.1|Name=mRNA_H-elongata_contig177928.4687.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=115bp
CLCPRADFGGVEVGPKEDKLGIRASSTCPVTFSGCEVPADNVLGEVGRGY
KYAIEILNEGRIGIGAQMLGLSRGCMDATLPYLFERKQFGQMVGDFQGMQ
HQIAQVSTDIEAAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009075AcylCo_DH/oxidase_C
IPR009100AcylCoA_DH/oxidase_NM_dom
IPR036250AcylCo_DH-like_C