prot_H-elongata_contig177904.4685.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig177904.4685.1
Unique Name	prot_H-elongata_contig177904.4685.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	142

Homology

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BLAST of mRNA_H-elongata_contig177904.4685.1 vs. uniprot
Match: A0A126WYE1_SCYLO (Putative LOV domain-containing protein n=2 Tax=Scytosiphon TaxID=27966 RepID=A0A126WYE1_SCYLO)

HSP 1 Score: 275 bits (704), Expect = 7.460e-86
Identity = 136/142 (95.77%), Postives = 139/142 (97.89%), Query Frame = 0

Query:    1 MFVSTAEYFPACIVISDMTIPGAPMVYINGEFTKTTGYTKEEAVGRNCRFLQGPETEPESIAVIRNTLSKGQDCHVKLTNYRKNGEKFQNLLSMKPVFDADDIYRYVIGVQFEITQDVGLKKRLVQLDKLLRLLPSRLNLKS 142
            MFVSTAE+FPACIVISDMTIPGAPMVYINGEFTKTTGYTKEEAVGRNCRFLQGPETEPESIAVIRNTLSKGQDCHVKLTNYRKNGEKFQNLLSMKPVFD D+IYRYVIGVQFEI +D GLKKRLVQLDKLLRLLPSRLNLKS
Sbjct:  215 MFVSTAEFFPACIVISDMTIPGAPMVYINGEFTKTTGYTKEEAVGRNCRFLQGPETEPESIAVIRNTLSKGQDCHVKLTNYRKNGEKFQNLLSMKPVFDGDNIYRYVIGVQFEILEDKGLKKRLVQLDKLLRLLPSRLNLKS 356

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BLAST of mRNA_H-elongata_contig177904.4685.1 vs. uniprot
Match: D7FQX8_ECTSI (Helmchrome putative blue light receptor for phototaxis n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQX8_ECTSI)

HSP 1 Score: 280 bits (716), Expect = 8.670e-85
Identity = 139/142 (97.89%), Postives = 140/142 (98.59%), Query Frame = 0

Query:    1 MFVSTAEYFPACIVISDMTIPGAPMVYINGEFTKTTGYTKEEAVGRNCRFLQGPETEPESIAVIRNTLSKGQDCHVKLTNYRKNGEKFQNLLSMKPVFDADDIYRYVIGVQFEITQDVGLKKRLVQLDKLLRLLPSRLNLKS 142
            MFVSTAE+FPACIVISDMTIPGAPMVYINGEFTKTTGYTKEEAVGRNCRFLQGPETEPESIAVIRNTLSKGQDCHVKLTNYRKNGEKFQNLLSMKPVFDADDIYRYVIGVQFEI QD GLKKRLVQLDKLLRLLPSRLNLKS
Sbjct:  168 MFVSTAEFFPACIVISDMTIPGAPMVYINGEFTKTTGYTKEEAVGRNCRFLQGPETEPESIAVIRNTLSKGQDCHVKLTNYRKNGEKFQNLLSMKPVFDADDIYRYVIGVQFEILQDEGLKKRLVQLDKLLRLLPSRLNLKS 309

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BLAST of mRNA_H-elongata_contig177904.4685.1 vs. uniprot
Match: A0A126X2E1_9PHAE (Putative LOV domain-containing protein n=2 Tax=Scytosiphon TaxID=27966 RepID=A0A126X2E1_9PHAE)

HSP 1 Score: 271 bits (694), Expect = 3.130e-82
Identity = 134/142 (94.37%), Postives = 138/142 (97.18%), Query Frame = 0

Query:    1 MFVSTAEYFPACIVISDMTIPGAPMVYINGEFTKTTGYTKEEAVGRNCRFLQGPETEPESIAVIRNTLSKGQDCHVKLTNYRKNGEKFQNLLSMKPVFDADDIYRYVIGVQFEITQDVGLKKRLVQLDKLLRLLPSRLNLKS 142
            MF+S+AE FPACIVISDMTIPGAPMVYINGEFTKTTGYTKEEAVGRNCRFLQGPETEPESIAVIRNTLSKGQDCHVKLTNYRKNGEKFQNLLSMKPVFD D+IYRYVIGVQFEI +D GLKKRLVQLDKLLRLLPSRLNLKS
Sbjct:  632 MFISSAESFPACIVISDMTIPGAPMVYINGEFTKTTGYTKEEAVGRNCRFLQGPETEPESIAVIRNTLSKGQDCHVKLTNYRKNGEKFQNLLSMKPVFDGDNIYRYVIGVQFEILEDKGLKKRLVQLDKLLRLLPSRLNLKS 773

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BLAST of mRNA_H-elongata_contig177904.4685.1 vs. uniprot
Match: A0A482RNG8_9ARCH (PAS domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RNG8_9ARCH)

HSP 1 Score: 247 bits (631), Expect = 2.760e-81
Identity = 121/142 (85.21%), Postives = 131/142 (92.25%), Query Frame = 0

Query:    1 MFVSTAEYFPACIVISDMTIPGAPMVYINGEFTKTTGYTKEEAVGRNCRFLQGPETEPESIAVIRNTLSKGQDCHVKLTNYRKNGEKFQNLLSMKPVFDADDIYRYVIGVQFEITQDVGLKKRLVQLDKLLRLLPSRLNLKS 142
            +FVSTAE  PACIVISDMTIPGAPMVY+N EF KTTGY KEEA+GRNCRFLQGP+TEPE+I VIRNTLSKGQDCHVKLTNYRKNGE FQNLLSMKPVFDAD IYRYVIGVQFEI +D  LK+RL+QLDKLLRLLPS+LNL+S
Sbjct:   19 IFVSTAESLPACIVISDMTIPGAPMVYVNQEFCKTTGYGKEEAIGRNCRFLQGPDTEPEAIQVIRNTLSKGQDCHVKLTNYRKNGEMFQNLLSMKPVFDADGIYRYVIGVQFEIKEDDKLKERLIQLDKLLRLLPSKLNLRS 160

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BLAST of mRNA_H-elongata_contig177904.4685.1 vs. uniprot
Match: A0A835YT73_9STRA (PAS/PAC sensor hybrid histidine kinase putative blue light receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT73_9STRA)

HSP 1 Score: 262 bits (669), Expect = 2.000e-78
Identity = 131/142 (92.25%), Postives = 133/142 (93.66%), Query Frame = 0

Query:    1 MFVSTAEYFPACIVISDMTIPGAPMVYINGEFTKTTGYTKEEAVGRNCRFLQGPETEPESIAVIRNTLSKGQDCHVKLTNYRKNGEKFQNLLSMKPVFDADDIYRYVIGVQFEITQDVGLKKRLVQLDKLLRLLPSRLNLKS 142
            MFVSTAE FPACIVISDMTIPGAPMVYIN EFTK TGYTKEEAVGRNCRFLQGP+TEPESIAVIRNTLSKGQDCHVKLTNYRKNG+KFQNLLSMKPVFD D IYRYVIGVQFEI  D GLKKRLVQLDKLLRLLPSRL LKS
Sbjct:  953 MFVSTAESFPACIVISDMTIPGAPMVYINSEFTKVTGYTKEEAVGRNCRFLQGPDTEPESIAVIRNTLSKGQDCHVKLTNYRKNGDKFQNLLSMKPVFDGDGIYRYVIGVQFEIIADQGLKKRLVQLDKLLRLLPSRLPLKS 1094

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BLAST of mRNA_H-elongata_contig177904.4685.1 vs. uniprot
Match: A0A7S1UBY0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UBY0_9STRA)

HSP 1 Score: 252 bits (644), Expect = 3.900e-77
Identity = 121/142 (85.21%), Postives = 134/142 (94.37%), Query Frame = 0

Query:    1 MFVSTAEYFPACIVISDMTIPGAPMVYINGEFTKTTGYTKEEAVGRNCRFLQGPETEPESIAVIRNTLSKGQDCHVKLTNYRKNGEKFQNLLSMKPVFDADDIYRYVIGVQFEITQDVGLKKRLVQLDKLLRLLPSRLNLKS 142
            MFVS+AE FPACIVISDMTIPGAPMVY+NGEF++TTGYTKEE+VGRNCRFLQGP+TEPESI VIRNTLSKGQDCHV LTNYRKNGEKF+NLLSM+PVFDAD+IYRYVIGVQFE+ QD  LKKRLVQLDKLL+LLP ++ LKS
Sbjct:  212 MFVSSAESFPACIVISDMTIPGAPMVYVNGEFSRTTGYTKEESVGRNCRFLQGPDTEPESIQVIRNTLSKGQDCHVLLTNYRKNGEKFRNLLSMRPVFDADNIYRYVIGVQFEVVQDKNLKKRLVQLDKLLKLLPRKIGLKS 353

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BLAST of mRNA_H-elongata_contig177904.4685.1 vs. uniprot
Match: A0A7S1UEB3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UEB3_9STRA)

HSP 1 Score: 252 bits (644), Expect = 2.110e-75
Identity = 121/142 (85.21%), Postives = 134/142 (94.37%), Query Frame = 0

Query:    1 MFVSTAEYFPACIVISDMTIPGAPMVYINGEFTKTTGYTKEEAVGRNCRFLQGPETEPESIAVIRNTLSKGQDCHVKLTNYRKNGEKFQNLLSMKPVFDADDIYRYVIGVQFEITQDVGLKKRLVQLDKLLRLLPSRLNLKS 142
            MFVS+AE FPACIVISDMTIPGAPMVY+NGEF++TTGYTKEE+VGRNCRFLQGP+TEPESI VIRNTLSKGQDCHV LTNYRKNGEKF+NLLSM+PVFDAD+IYRYVIGVQFE+ QD  LKKRLVQLDKLL+LLP ++ LKS
Sbjct:  551 MFVSSAESFPACIVISDMTIPGAPMVYVNGEFSRTTGYTKEESVGRNCRFLQGPDTEPESIQVIRNTLSKGQDCHVLLTNYRKNGEKFRNLLSMRPVFDADNIYRYVIGVQFEVVQDKNLKKRLVQLDKLLKLLPRKIGLKS 692

[Close]

BLAST of mRNA_H-elongata_contig177904.4685.1 vs. uniprot
Match: A0A835YJF7_9STRA (PAS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJF7_9STRA)

HSP 1 Score: 228 bits (581), Expect = 5.140e-69
Identity = 106/141 (75.18%), Postives = 126/141 (89.36%), Query Frame = 0

Query:    2 FVSTAEYFPACIVISDMTIPGAPMVYINGEFTKTTGYTKEEAVGRNCRFLQGPETEPESIAVIRNTLSKGQDCHVKLTNYRKNGEKFQNLLSMKPVFDADDIYRYVIGVQFEITQDVGLKKRLVQLDKLLRLLPSRLNLKS 142
            F++TA+ FPACIV+SDMT PGAPM+++N  F K TGY+KEE VGRNCRFLQGP+TEPE+IA+IR+TLS+GQDCHVKLTNYRKNGEKFQNLLSMKPVFDA+ IYRYVIGVQFE+  D GLK+RL QLDKLL ++PS+L  K+
Sbjct:  244 FIATADSFPACIVVSDMTQPGAPMIFVNDAFCKVTGYSKEETVGRNCRFLQGPDTEPEAIALIRSTLSQGQDCHVKLTNYRKNGEKFQNLLSMKPVFDANGIYRYVIGVQFEVVADKGLKRRLSQLDKLLTMMPSKLQTKA 384

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BLAST of mRNA_H-elongata_contig177904.4685.1 vs. uniprot
Match: A0A7S4IDC3_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4IDC3_9EUKA)

HSP 1 Score: 202 bits (513), Expect = 2.790e-63
Identity = 92/141 (65.25%), Postives = 118/141 (83.69%), Query Frame = 0

Query:    2 FVSTAEYFPACIVISDMTIPGAPMVYINGEFTKTTGYTKEEAVGRNCRFLQGPETEPESIAVIRNTLSKGQDCHVKLTNYRKNGEKFQNLLSMKPVFDADDIYRYVIGVQFEITQDVGLKKRLVQLDKLLRLLPSRLNLKS 142
            FV+ AE +PACIVISDM +PG PM ++N EF KTTGY K E  GRNCRFLQGP+TEP+S+AVI++TL +G DCHVKLTNYRKNG+ F+NLL+M+PV D++ +YR+ IGVQFE+T+D+ LK RL +LDKL++LLPS L + S
Sbjct:   22 FVAVAETYPACIVISDMQVPGNPMFFVNQEFCKTTGYPKHEVQGRNCRFLQGPKTEPQSVAVIQDTLRRGVDCHVKLTNYRKNGDLFENLLTMRPVHDSNGVYRFCIGVQFEVTRDLSLKSRLAKLDKLVKLLPSTLEVSS 162

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BLAST of mRNA_H-elongata_contig177904.4685.1 vs. uniprot
Match: A0A7S4MJ40_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4MJ40_9EUKA)

HSP 1 Score: 202 bits (513), Expect = 3.060e-61
Identity = 92/141 (65.25%), Postives = 118/141 (83.69%), Query Frame = 0

Query:    2 FVSTAEYFPACIVISDMTIPGAPMVYINGEFTKTTGYTKEEAVGRNCRFLQGPETEPESIAVIRNTLSKGQDCHVKLTNYRKNGEKFQNLLSMKPVFDADDIYRYVIGVQFEITQDVGLKKRLVQLDKLLRLLPSRLNLKS 142
            FV+ AE +PACIVISDM +PG PM ++N EF KTTGY K E  GRNCRFLQGP+TEP+S+AVI++TL +G DCHVKLTNYRKNG+ F+NLL+M+PV D++ +YR+ IGVQFE+T+D+ LK RL +LDKL++LLPS L + S
Sbjct:  186 FVAVAETYPACIVISDMQVPGNPMFFVNQEFCKTTGYPKHEVQGRNCRFLQGPKTEPQSVAVIQDTLRRGVDCHVKLTNYRKNGDLFENLLTMRPVHDSNGVYRFCIGVQFEVTRDLSLKSRLAKLDKLVKLLPSTLEVSS 326

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig177904.4685.1 vs. uniprot

BLAST of mRNA_H-elongata_contig177904.4685.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A126WYE1_SCYLO	7.460e-86	95.77	Putative LOV domain-containing protein n=2 Tax=Scy...	[more]
D7FQX8_ECTSI	8.670e-85	97.89	Helmchrome putative blue light receptor for photot...	[more]
A0A126X2E1_9PHAE	3.130e-82	94.37	Putative LOV domain-containing protein n=2 Tax=Scy...	[more]
A0A482RNG8_9ARCH	2.760e-81	85.21	PAS domain-containing protein n=1 Tax=archaeon Tax...	[more]
A0A835YT73_9STRA	2.000e-78	92.25	PAS/PAC sensor hybrid histidine kinase putative bl...	[more]
A0A7S1UBY0_9STRA	3.900e-77	85.21	Hypothetical protein (Fragment) n=1 Tax=Phaeomonas...	[more]
A0A7S1UEB3_9STRA	2.110e-75	85.21	Hypothetical protein (Fragment) n=1 Tax=Phaeomonas...	[more]
A0A835YJF7_9STRA	5.140e-69	75.18	PAS domain-containing protein n=1 Tax=Tribonema mi...	[more]
A0A7S4IDC3_9EUKA	2.790e-63	65.25	Hypothetical protein n=1 Tax=Prymnesium polylepis ...	[more]
A0A7S4MJ40_9EUKA	3.060e-61	65.25	Hypothetical protein n=1 Tax=Prymnesium polylepis ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000014	PAS domain	TIGRFAM	TIGR00229	TIGR00229	coord: 4..118 e-value: 5.7E-14 score: 50.3
IPR000014	PAS domain	PFAM	PF13426	PAS_9	coord: 12..116 e-value: 2.9E-18 score: 66.0
IPR000014	PAS domain	PROSITE	PS50112	PAS	coord: 25..71 score: 11.101
None	No IPR available	GENE3D	3.30.450.20		coord: 12..141 e-value: 8.7E-42 score: 144.6
None	No IPR available	PANTHER	PTHR47429	FAMILY NOT NAMED	coord: 14..118
IPR000700	PAS-associated, C-terminal	PROSITE	PS50113	PAC	coord: 72..126 score: 9.657
IPR035965	PAS domain superfamily	SUPERFAMILY	55785	PYP-like sensor domain (PAS domain)	coord: 7..116

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig177904	contig	H-elongata_contig177904:214..639 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig177904.4685.1	mRNA_H-elongata_contig177904.4685.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig177904 214..666 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig177904.4685.1 ID=prot_H-elongata_contig177904.4685.1|Name=mRNA_H-elongata_contig177904.4685.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=142bp
MFVSTAEYFPACIVISDMTIPGAPMVYINGEFTKTTGYTKEEAVGRNCRF
LQGPETEPESIAVIRNTLSKGQDCHVKLTNYRKNGEKFQNLLSMKPVFDA
DDIYRYVIGVQFEITQDVGLKKRLVQLDKLLRLLPSRLNLKS

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000014	PAS
IPR000700	PAS-assoc_C
IPR035965	PAS-like_dom_sf