prot_H-elongata_contig17790.4684.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig17790.4684.1
Unique Nameprot_H-elongata_contig17790.4684.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length84
Homology
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BLAST of mRNA_H-elongata_contig17790.4684.1 vs. uniprot
Match: D7FLC4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLC4_ECTSI)

HSP 1 Score: 115 bits (289), Expect = 2.980e-28
Identity = 58/85 (68.24%), Postives = 66/85 (77.65%), Query Frame = 0 
Query:    3 GDTLNFFDDPPPGNRV----PTSGATQTGGPPDGNGGEFNLEFIEFSSFQELLVFFGRTLTERYDTSREKQETIPSPMYMHNMDD 83
            GDTL+FFDDPP GN+V    P  GA        G+GG  NLE++EF +F ELLVFFGRTLTERYDTSRE+QETIPSPMYMHNMD+
Sbjct:  732 GDTLSFFDDPPQGNQVQHQLPVGGAA-------GHGGAMNLEYVEFPNFHELLVFFGRTLTERYDTSREEQETIPSPMYMHNMDE 809
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17790.4684.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FLC4_ECTSI2.980e-2868.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17790contigH-elongata_contig17790:5959..6796 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17790.4684.1mRNA_H-elongata_contig17790.4684.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig17790 4407..6796 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig17790.4684.1 ID=prot_H-elongata_contig17790.4684.1|Name=mRNA_H-elongata_contig17790.4684.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=84bp
MQGDTLNFFDDPPPGNRVPTSGATQTGGPPDGNGGEFNLEFIEFSSFQEL
LVFFGRTLTERYDTSREKQETIPSPMYMHNMDD*
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