prot_H-elongata_contig17776.4681.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig17776.4681.1
Unique Nameprot_H-elongata_contig17776.4681.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length105
Homology
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BLAST of mRNA_H-elongata_contig17776.4681.1 vs. uniprot
Match: D8LM35_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM35_ECTSI)

HSP 1 Score: 57.8 bits (138), Expect = 6.940e-8
Identity = 26/31 (83.87%), Postives = 28/31 (90.32%), Query Frame = 0 
Query:   12 MLKASAKWGSGGVGKEQIPVPVCKVKYQPFR 42
            ML+ASA+WGSG  GKEQI VPVCKVKYQPFR
Sbjct:    1 MLEASARWGSGARGKEQISVPVCKVKYQPFR 31
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17776.4681.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LM35_ECTSI6.940e-883.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17776contigH-elongata_contig17776:5297..5699 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17776.4681.1mRNA_H-elongata_contig17776.4681.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig17776 5295..5699 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig17776.4681.1 ID=prot_H-elongata_contig17776.4681.1|Name=mRNA_H-elongata_contig17776.4681.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=105bp
SSASSGPQASAMLKASAKWGSGGVGKEQIPVPVCKVKYQPFRWLPPGRRD
DMDGAGSGKYEKCGGKKCTRVTSTTRKENPCSNDLARAKVGNRSTSGMTP
AARAR
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