mRNA_H-elongata_contig17763.4673.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig17763.4673.1
Unique NamemRNA_H-elongata_contig17763.4673.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig17763.4673.1 vs. uniprot
Match: A0A6H5K090_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K090_9PHAE)

HSP 1 Score: 453 bits (1166), Expect = 1.560e-155
Identity = 226/351 (64.39%), Postives = 272/351 (77.49%), Query Frame = 1
Query:    1 TFHSISCLEVHVDAMDVAGENQIDIDHDMLKQRLGPDGIAIGEPFAEVPGEGDN--SLELPEDYCGSCYGARKDCCNTCRDVADAYNALGWALHDIRRTAEQCIRDNHMENPLVEGEGCRLSGFMSVNKVSGNFHVAAGEGVMRDGKHIHLYNHDDAVAFNSSHTIHRLSFGEPFPGMRPNPLDGASRIIDEDISTGLFQYFVKLVPTVRWVGPH--------PAGDAS-VKVGEPATLTSQFSYTYKFRSLKGETEYKKERADGDDLPHHDAAHGQEKDARLNA----VILPAGVFFMYDVSPFMVEIIPVKNMPLPHLLIRLCAVAGGAFAVSSIVDSVVFHVSNRLRR 1008
            TFHSI CL+VHVDAMDVAG+NQIDIDH M KQRL PDG AIGE F EVPG+ D+  +  LPEDYCGSC+GA++ CCN CRDV +AY A GW++ DIRRTAEQCIRDNH+E P+V GEGC LSGFMSVNKVSGNFHVA GEGVMR+G+H+HLY  + AV FN+SH+I+ LSFGEP+PGM+PNPLD  SRIIDED+ TG FQY++KLVPTV  + P         P G     +  + ++LTSQF+YTYKFRSLKG TEY  +  +G++    +A  G  KD  +N+    V+LP GVFF+YDVSPFMVE++P +  P  HLLIRLCAVAGGAFA+S IVDS VF++SNRLRR
Sbjct:  113 TFHSIPCLDVHVDAMDVAGDNQIDIDHGMWKQRLDPDGSAIGEAFMEVPGKVDDDPAQSLPEDYCGSCFGAKEGCCNMCRDVVEAYTAKGWSVQDIRRTAEQCIRDNHIETPIVIGEGCNLSGFMSVNKVSGNFHVATGEGVMREGRHVHLYTMEQAVGFNTSHSINLLSFGEPYPGMKPNPLDSTSRIIDEDVGTGAFQYYIKLVPTVHSLNPQSETSRSPLPKGKREEAEQQQHSSLTSQFTYTYKFRSLKGLTEYHADHEEGEEQAK-EAEKGSTKDGGVNSFANSVLLP-GVFFVYDVSPFMVEVVPAEQPPFSHLLIRLCAVAGGAFAISGIVDSAVFYLSNRLRR 461          
BLAST of mRNA_H-elongata_contig17763.4673.1 vs. uniprot
Match: A0A836CGD9_9STRA (Endoplasmic reticulum vesicle transporter-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGD9_9STRA)

HSP 1 Score: 316 bits (809), Expect = 1.800e-101
Identity = 169/372 (45.43%), Postives = 228/372 (61.29%), Query Frame = 1
Query:    1 TFHSISCLEVHVDAMDVAGENQIDIDHDMLKQRLGPDGIAIGEPFAEVPGEGDNSLE----LPEDYCGSCYGARKD-----------------CCNTCRDVADAYNALGWALHDIRRTAEQCIRDNHMENPLVEGEGCRLSGFMSVNKVSGNFHVAAGEGVMRDGKHIHLYNHDDAVAFNSSHTIHRLSFGEPFPGMRPNPLDGASRIIDEDISTGLFQYFVKLVPTVRWVGPHPAGDASVKVGEPATL-TSQFSYTYKFRSLKGETEYKKERADGDDLPHH-------------DAAHGQEKDARLNAVILPAGVFFMYDVSPFMVEIIPVKNMPLPHLLIRLCAVAGGAFAVSSIVDSVVFHVSNRLRRR 1011
            TFH+I+CL++HVDAMDVAG+NQ+D++H MLKQRL     A GEP A    E  + LE    LP DYCG+CYG+                    CCNTC  V +++   GW+  ++R+TAEQCIR+ H+E P+ E EGC LSG M VNKV+GNFH+A GE +++DG+H+H++N DD+  FN SHTIH LSFG+ +P M  NPLDG  R++ ED  TGL QY++ LVP V          A    GE   L T+QF+YT KFRS+ G  +++          HH             D A G+ K   +   +LP GVFF+YD++PFM+E+  V   PL H LIRLCAV GG +AVS ++D  ++HV + ++ R
Sbjct:  111 TFHAINCLDLHVDAMDVAGDNQLDVEHAMLKQRLS----AAGEPLAPAISEEVSQLEHRATLPRDYCGNCYGSDSRGRAAAAAERAASGGSIRCCNTCHAVVESFALRGWSTAEVRKTAEQCIREAHLEVPMQEMEGCNLSGKMRVNKVAGNFHMAMGESMVKDGRHVHIFNIDDSDTFNISHTIHSLSFGDTYPDMPANPLDGVVRMVGEDTGTGLMQYYINLVPAVY--------KAEGSSGEKTELVTTQFTYTMKFRSVYGYDDFQAHEHHDQPGHHHAIGEHRDVPGDEGDGAGGKRKRREITNYLLP-GVFFVYDMAPFMLEV-EVWQQPLSHFLIRLCAVVGGVYAVSGMLDQALYHVISHMKGR 468          
BLAST of mRNA_H-elongata_contig17763.4673.1 vs. uniprot
Match: A0A7S3M7C1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M7C1_9STRA)

HSP 1 Score: 276 bits (705), Expect = 9.050e-87
Identity = 149/336 (44.35%), Postives = 208/336 (61.90%), Query Frame = 1
Query:    1 TFHSISCLEVHVDAMDVAGENQIDIDHDMLKQRLGPDGIAIGEPFAEVPGEGDNSLE-LPEDYCGSCYGARKD---CCNTCRDVADAYNALGWALHDIRRTAEQCIRDN--HMENPLVEGEGCRLSGFMSVNKVSGNFHVAAGEGVMRDGKHIHLYNHDDAVAFNSSHTIHRLSFGEPFPGMRPNPLDGASRIIDEDISTGLFQYFVKLVPTVRWVGPHPAGDASVKVGEPATLTSQFSYTYKFRSLKGETEYKKERADGDDLPHHDAAHGQEKDARLNAVILPAGVFFMYDVSPFMVEIIPVKNMPLPHLLIRLCAVAGGAFAVSSIVDSVVFHV 990
            TFHS++C EVH+DAMDVAG+NQ++++H+M+KQR+   GI IG    E+ GEG   +E  P +YCG C+GA      CCNTC  +  AY    W++ +I R + QCI D   H  N +   EGC +SG MSVNKV+GNFH+A GE ++RDG+HIH +N   A  FN SHTIH LSFG+P+P M  NPLD   RII ED STGLFQYF++++PT+           + + G     T+Q++ T +FR L         +A+GD+ P                 ILP G+FF+Y++SPFM+E   ++ MP  H + +LCA+ GG F V  ++DS++F +
Sbjct:   90 TFHSLTCNEVHLDAMDVAGDNQLNVEHEMVKQRMSRHGIPIGAAGVEIIGEGPIEVEDHPPNYCGDCFGADTPEIRCCNTCDQLIQAYQLKQWSVSEILRNSTQCIHDRAKHFAN-IGADEGCTVSGKMSVNKVAGNFHIAHGESIVRDGRHIHQFNPALAPKFNVSHTIHSLSFGDPYPSMPANPLDSVKRIIAEDESTGLFQYFIRVIPTIY----------TNEYGR-QVFTNQYTITDRFRPLN------MPQANGDNKPQE--------------AILP-GIFFVYELSPFMIEASRIR-MPFLHFVTKLCAIVGGVFTVLGVLDSILFRL 391          
BLAST of mRNA_H-elongata_contig17763.4673.1 vs. uniprot
Match: W7UAM5_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7UAM5_9STRA)

HSP 1 Score: 271 bits (694), Expect = 1.040e-84
Identity = 155/355 (43.66%), Postives = 214/355 (60.28%), Query Frame = 1
Query:    1 TFHSISCLEVHVDAMDVAGENQIDIDHDMLKQRLGPDGIAIGEPFAEVPGEGDNSLE------LPEDYCGSCYGARKD---CCNTCRDVADAYNALGWALHDIRRTAEQCIRDNHM---ENPLVEGEGCRLSGFMSVNKVSGNFHVAAGEGVMRDGKHIHLYNHDDAVAFNSSHTIHRLSFGEPFPGMRPNPLDGASRIIDEDISTGLFQYFVKLVPTVRWVGPHPAGDASVKVGEPATLTSQFSYTYKFRSLKGETEYKKERADGDDLPHHDAAHGQEKDARLNAVILPAGVFFMYDVSPFMVEIIPVKNMPLPHLLIRLCAVAGGAFAVSSIVDSVVFHVSNRLRRRRSSLLG 1029
            TFH+++C +VHVDAMDVAG+NQ+ ++H+MLKQRL   G  IG PF E P + D+          P DYCGSC+ AR     CCN+C+D+  AY   G  +  I+ TA QC+          P+ +GEGC L GFMSVNKV+GNFH+A G+ V++DG+HIH +   +A  FN SHTI  +SFG+ +PG R NPLDG  + +   + TGLFQYF+K++PT      H  G A    GE A  T++ S T +F+ L  E E    R  GD   H+D              +LP GVFF+YD+SPF VE+  V ++P  H L++LCA+AGG F++S ++D+V ++    L +    L G
Sbjct:  103 TFHALTCADVHVDAMDVAGDNQMQVEHNMLKQRLSSQGERIGFPFLEDPTDFDSKKADALLGAAPWDYCGSCFQARTHTGACCNSCQDLEQAYLTQGLPMGKIKTTAPQCLPGFQAPAPSGPMQKGEGCNLKGFMSVNKVAGNFHIAFGDSVVKDGRHIHQFIPSEAPFFNVSHTIQHVSFGDEYPG-RVNPLDGKVKYVSSTVGTGLFQYFIKVIPT------HYKGRA----GE-AIRTNRISVTERFKPLHKEGEA---RLTGDSHAHNDQTS-----------VLP-GVFFIYDLSPFNVEVSTV-SVPFSHFLVKLCAIAGGVFSISRLLDNVFYYSGLFLGKGTGFLAG 429          
BLAST of mRNA_H-elongata_contig17763.4673.1 vs. uniprot
Match: B7FRC3_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FRC3_PHATC)

HSP 1 Score: 243 bits (619), Expect = 1.040e-72
Identity = 147/361 (40.72%), Postives = 210/361 (58.17%), Query Frame = 1
Query:    1 TFHSISCLEVHVDAMDVAGENQIDIDHDMLKQRLGPDG-IAIGEPFAEVPGEGDNSLE-------LPEDYCGSCYGARKD---CCNTCRDVADAYNALGWALHDIRRTAEQCIRDNHMEN---PLVEGEGCRLSGFMSVNKVSGNFHVAAGEGVMRDGKHIHLYNHDDAVAFNSSHTIHRLSFGEPFPG------MRPNPLDGASRIID-EDISTGLFQYFVKLVPTVRWVGPHPAGDASVKVGEPATLTSQFSYTYKFRSLKGETEYKKERADGDD----LPHHDAAHGQEKDARLNAVILPAGVFFMYDVSPFMVEIIPVKNMPLPHLLIRLCAVAGGAFAVSSIVDSVVFHVSNRLRR 1008
            TF S++C ++HVD MDVAG++Q++I+  + K+++   G     E       E + S +       LP+ YCG CYGA+ D   CCN C  + DAY   GW    +  TAEQCIR+   +    PL++GEGC LSGFMS+N+V+GNFH+A GEG+ RDG+HIH+++ +D+  +N+SH IH LSFG    G      +  + L+G ++++  E  +TGLFQYF+K+VPT  ++GP    D S         T+++ YT +FR L    EY  E A  +D      H    H       +   +LP GVFF+Y++ PF VEI PV ++PL HLLIRL A  GG F +   VD+ V   + R RR
Sbjct:  147 TFPSLACDDLHVDVMDVAGDSQLNIEDTLTKRKMDRTGRYGQAEILQSNQHEQEQSRKAKLRQDPLPDTYCGPCYGAQPDVDACCNNCDALLDAYKLKGWRTDLVLYTAEQCIREGRDQKKLRPLIQGEGCNLSGFMSLNRVAGNFHIAMGEGLQRDGRHIHVFDPEDSEHYNASHVIHHLSFGPEIQGKTKSGNLDSSSLNGVTKMVTPEHGTTGLFQYFIKVVPTT-YLGPGGRRDESGTFE-----TNRYFYTERFRPLM--KEYLPEEAVAEDPKQAAVHAGGGHRTHDHHHVRNSVLP-GVFFLYEIYPFAVEIHPV-SVPLTHLLIRLMATIGGVFTIVRWVDTAVLEGNPRNRR 497          
BLAST of mRNA_H-elongata_contig17763.4673.1 vs. uniprot
Match: A0A1E7ETJ2_9STRA (DUF1692-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ETJ2_9STRA)

HSP 1 Score: 237 bits (604), Expect = 2.400e-71
Identity = 152/372 (40.86%), Postives = 214/372 (57.53%), Query Frame = 1
Query:    1 TFHSISCLEVHVDAMDVAGENQIDIDHDMLKQRLGP-DGIAIGEPFAEVP-----GEGDN-----SLELPEDYCGSCYGARK---DCCNTCRDVADAYNALGWALHDIRRTAEQCIR---DNHMENPLVEGEGCRLSGFMSVNKVSGNFHVAAGEGVMRDGKHIHLYNHDDAVAFNSSHTIHRLSFGEPFPGMRPNPLDGASRIIDEDI-STGLFQYFVKLVPTVRWVGPHPAGDASVKVGEPATLTSQFSYTYKFRSLKGETEYKKERADGDDLP-----------HHDAAHGQEKDARLNAVILPAGVFFMYDVSPFMVEIIPVKNMPLPHLLIRLCAVAGGAFAVSSIVDSVVFHVS-NRLRRRRSSLL 1026
            TF  ++C ++H+DA+DVAG++QI+I+  + K RL   +G        +V      GE +      +  L EDYCG CYGA +    CC TC DV +AY    W    ++ TAEQC+R   D      + +GEGC LSG+M+VN+VSGNFH+A GEG+ RDG+HIH Y  +DA  FN+SH IH+LSFG   P     PL+GA++I+ E   STGLFQYF+K+VPT  +VG    G    K+ E    T+++ +T +F  L  E   + E  +GDD             HH+  H  ++++     +LP GVFF+Y++ PF +EI    ++P  HLLIRL A  GG F ++   DSV+   S N   R R SL+
Sbjct:   66 TFPGLACEDLHLDAIDVAGDSQINIEDTLKKIRLHEKNGRVYSRDEIKVELNAHRGEQEKKERILNENLDEDYCGPCYGAHEKEEQCCQTCDDVVEAYEKKKWKTELLQYTAEQCVREGRDRQEPKNMTQGEGCNLSGYMTVNRVSGNFHIAMGEGIERDGRHIHTYVPEDAPNFNASHIIHQLSFG---PEDGKEPLNGATKIVTEKTGSTGLFQYFIKIVPTT-YVGE---GSHFPKIDEAKMETNRYFFTERFMPLMTEL-LEDEHYEGDDYGKAAADAGYTGGHHNEDHHMKQNS-----VLP-GVFFIYEIYPFAMEITQ-NSVPFTHLLIRLMATIGGVFTLARWADSVLNERSRNNASRNRRSLI 422          
BLAST of mRNA_H-elongata_contig17763.4673.1 vs. uniprot
Match: A0A7S2XV93_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV93_9STRA)

HSP 1 Score: 231 bits (590), Expect = 8.050e-71
Identity = 125/265 (47.17%), Postives = 167/265 (63.02%), Query Frame = 1
Query:  217 CCNTCRDVADAYNALGWALHDIRRTAEQCIRDNHMENPLVEG--EGCRLSGFMSVNKVSGNFHVAAGEGVMRDGKHIHLYNHDDAVAFNSSHTIHRLSFGEPFPGMRPNPLDGASRIIDEDISTGLFQYFVKLVPTVRWVGPH--------PAGDASVKVGEPATLTSQFSYTYKFRSLKGETEYKKERADGDDLPHHDAAHGQEKDARLNAVILPAGVFFMYDVSPFMVEIIPVKNMPLPHLLIRLCAVAGGAFAVSSIVDSVV 981
            CCNTC+++ +AY A+GW+L  ++  AEQCIR+ +    +     EGC L+G + VNKV+GNFHVA GE V+RDG+HIHL++ ++A AFN SHT+HRLSFG+P+PGM  NPLDG  R  DE+  TGL QYFV ++PT+   G H         A D  V   + A LT+QFSYT +FR L      K ER D    P H               ILP GVFF+YD+SPFM+E+    + PL HLL +LCA+AGG   V+ ++D+ +
Sbjct:   38 CCNTCQELTEAYGAMGWSLGGLKNKAEQCIREKNTRQDISADAKEGCNLAGMLLVNKVAGNFHVAVGEAVVRDGRHIHLFDPEEAEAFNISHTVHRLSFGDPYPGMPTNPLDGRVRYFDEENGTGLLQYFVHIIPTIYSQGGHVDYTEINNQADDGQVITSD-ALLTNQFSYTERFRPLFDRP--KTERRDSM-TPRH-----------AFTPILP-GVFFIYDISPFMIEV-TYASTPLSHLLTKLCAIAGGVVTVAGVLDAAL 285          
BLAST of mRNA_H-elongata_contig17763.4673.1 vs. uniprot
Match: A0A7S1D866_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D866_CYCTE)

HSP 1 Score: 230 bits (587), Expect = 1.430e-68
Identity = 146/376 (38.83%), Postives = 210/376 (55.85%), Query Frame = 1
Query:    1 TFHSISCLEVHVDAMDVAGENQIDIDHDMLKQRLGPDGIAIGEPFAEVPGEGDNSLE----------LPEDYCGSCYGARKD---CCNTCRDVADAYNALGWALHDIRRTAEQCIR---DNHMENPLVEGEGCRLSGFMSVNKVSGNFHVAAGEGVMRDGKHIHLYNHDDAVAFNSSHTIHRLSFGEPFPGMRPNP-LDGASRII-DEDISTGLFQYFVKLVPT-------VRWVGPHPAGDASVKV-------GEPATL-TSQFSYTYKFRSLKGETEYKKERADGDDLPH------HDAAHGQEKDARLNAVILPAGVFFMYDVSPFMVEIIPVKNMPLPHLLIRLCAVAGGAFAVSSIVDSVVFHVSNRLRRR 1011
            TF S++C ++HVDAMDVAG++QID++  ++K+ L PDG         V      S +          LPE+YCG C+GA+++   CC TC ++ +AY    W    +  TAEQCIR   D      + +G+GC LSG+M+VN+V+GNFH+A GEG+ RDG+HIH +  +DA  FN+SH IH+LSFG   PG      ++G ++I+ DE  +TGLFQYF+K+VPT       +  VG   +  A   +       G+   L T+++ +T +FR L  E   K + A+ DD         H   H  +    +   ILP GVFF+Y++ PF VEI     +P  HLLIRL A  GG F V S V++ +     + R R
Sbjct:   75 TFPSMACEDLHVDAMDVAGDSQIDVEDTLVKKPLRPDGSPRSAEEIRVETNSHRSDQEKKEKILKEKLPENYCGPCFGAQEEDDQCCQTCDELLEAYKKKRWKSTLLMYTAEQCIREGRDKKEPKRMTKGQGCNLSGYMTVNRVAGNFHIAMGEGIERDGRHIHTFLPEDAPNFNASHVIHQLSFG---PGEEEAAAMNGVTKIVKDEHGTTGLFQYFIKVVPTTYRGKDMIARVGTEKSAQALPSLFEEVEDQGDDTVLETNRYFFTERFRPLMKEF-LKDDHAEEDDPKKAGVNAGHKGTHSNQDHHHVQNAILP-GVFFIYEIYPFAVEI-KTAAVPFTHLLIRLMATIGGVFTVVSWVEAALCAPGGKRRGR 444          
BLAST of mRNA_H-elongata_contig17763.4673.1 vs. uniprot
Match: A0A7S1ZET6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZET6_9STRA)

HSP 1 Score: 232 bits (592), Expect = 1.950e-68
Identity = 149/393 (37.91%), Postives = 218/393 (55.47%), Query Frame = 1
Query:    1 TFHSISCLEVHVDAMDVAGENQIDIDHDMLKQRLGPDGIAIGEPFAEVPG----------EGDNSLELPEDYCGSCYGARK---DCCNTCRDVADAYNALGWALHDIRRTAEQCIRDN--HMENPLV-EGEGCRLSGFMSVNKVSGNFHVAAGEGVMRDGKHIHLYNHDDAVAFNSSHTIHRLSFGEPFPGMRPNPL--------DGASRIIDE-DISTGLFQYFVKLVPT--------VRWVGPHPA---------GDASVKVGE------PATLTSQFSYTYKFRSLKGETEYKKERADGDD--LPHHDAAHGQEKDA--RLNAVILPAGVFFMYDVSPFMVEIIPVKNMPLPHLLIRLCAVAGGAFAVSSIVDSVVFHVSNRLRRRRSSL 1023
            TF S+ C ++HVD MD+AG++Q+ +D  M+K+RL PDG  +G    +V            EG  + E+ ++YCG CYGA +    CCNTC DV  AY    W   ++ + AEQCIR+    ++ PL+ +GEGC LSG M VN+VSGNFH+A GEG+ +DG+HIH +  +D   FN+SH +H L+FG     +    +        +GA++I+ E D +TGLFQYF+K+VPT           VG  P              +KV E      P   T++F +T +FR L  E +  K+ +   D  + H  A     K +  ++   ILP GVFF+Y++ PF VE+  V  +PL HLLIR+ A  GG F +   VD++++    + R+R  SL
Sbjct:  136 TFPSLHCNDLHVDVMDIAGDSQLGVDDSMVKRRLHPDGSPLGTKEIKVEANKAAEEHSKREGILAEEVGDNYCGPCYGAHETEDQCCNTCDDVQKAYKKKRWNSGEVVKLAEQCIREGVTSLQLPLMSKGEGCNLSGHMEVNRVSGNFHIAMGEGIEKDGRHIHQFTPEDTPNFNASHIVHELTFGPSLDSIFKKSIGVGQIAAMNGATKIVTEKDGTTGLFQYFIKVVPTSYRGTDLVTLVVGSSPTLTEKDSPLISFEKIKVSEEASDLEPVIHTNRFFFTERFRPLFTEWDDNKKNSGQLDTSIGHGSATKDGAKGSHHKVQNSILP-GVFFVYEIYPFAVEVRSV-TVPLTHLLIRIMATVGGVFTIVGWVDAMLYS-REKARKRAGSL 525          
BLAST of mRNA_H-elongata_contig17763.4673.1 vs. uniprot
Match: A0A1Z5J8X2_FISSO (COPIIcoated_ERV domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J8X2_FISSO)

HSP 1 Score: 227 bits (579), Expect = 2.400e-68
Identity = 141/362 (38.95%), Postives = 200/362 (55.25%), Query Frame = 1
Query:    1 TFHSISCLEVHVDAMDVAGENQIDIDHDMLKQRLGPDGIAIGEPFAEVPGEGDNSLE----------LPEDYCGSCYGARKD---CCNTCRDVADAYNALGWALHDIRRTAEQCIR---DNHMENPLVEGEGCRLSGFMSVNKVSGNFHVAAGEGVMRDGKHIHLYNHDDAVAFNSSHTIHRLSFGEP-----FPGMRPNPLDGASRIIDEDI-STGLFQYFVKLVPTVRWVGPHPAGDASVKVGEPATLTSQFSYTYKFRSLK----GETEYKKERADGDD--------LPHHDAAHGQEKDARLNAVILPAGVFFMYDVSPFMVEIIPVKNMPLPHLLIRLCAVAGGAFAVSSIVDSVVF 984
            TF +++C ++HVD MDVAG++Q+DI   ++K+RL   G  IG    +     +   +          LPE+YCG CYGA  D   CCNTC ++ DAY A  W    ++ T+EQC+R   D      +  GEGC LSG++ VN+V+GNFH+A GEG+ RDGKHIH +N +D   FN+SH IH LSFG       F       L+G S+I+     +TGLFQYF+K+VPT          D+ V++      T+ + +T +FR L      E +Y+ E    +D          H   A     D R NAV+   GVFF+Y++ PF V+I   K +PL HLLIRL A  GG F +  + D++++
Sbjct:    4 TFPNLACEDLHVDVMDVAGDSQLDIFDTLVKKRLSRSGRPIGSDVLKAEANANQQRQEEKLRLLKEKLPENYCGPCYGANDDENQCCNTCDELLDAYIAKKWRTDIVQYTSEQCMREGRDKKEPKRMKRGEGCNLSGYLEVNRVAGNFHIAMGEGIERDGKHIHTFNPEDTPNFNASHIIHDLSFGASGTKVGFGEEPQKTLNGVSKIVTRQHGTTGLFQYFIKVVPTSYIT------DSGVRIA-----TNGYFFTERFRPLMKEYIAEDDYEDEDETDEDGKRTVAVQAGHAHKAKTSNHDVR-NAVL--PGVFFIYEIYPFEVQIRKNK-VPLTHLLIRLMATVGGVFTMFKLADNLLY 350          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17763.4673.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K090_9PHAE1.560e-15564.39Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CGD9_9STRA1.800e-10145.43Endoplasmic reticulum vesicle transporter-domain-c... [more]
A0A7S3M7C1_9STRA9.050e-8744.35Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
W7UAM5_9STRA1.040e-8443.66Uncharacterized protein n=3 Tax=Monodopsidaceae Ta... [more]
B7FRC3_PHATC1.040e-7240.72Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A1E7ETJ2_9STRA2.400e-7140.86DUF1692-domain-containing protein n=1 Tax=Fragilar... [more]
A0A7S2XV93_9STRA8.050e-7147.17Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1D866_CYCTE1.430e-6838.83Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S1ZET6_9STRA1.950e-6837.91Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A1Z5J8X2_FISSO2.400e-6838.95COPIIcoated_ERV domain-containing protein n=1 Tax=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17763contigH-elongata_contig17763:3611..6463 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score439.1
Seed ortholog evalue1.9e-120
Seed eggNOG ortholog2880.D7FQQ1
Preferred nameERGIC3
KEGG koko:K20365,ko:K20367
GOsGO:0000139,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005793,GO:0005794,GO:0005798,GO:0006810,GO:0006886,GO:0006888,GO:0008104,GO:0008150,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016192,GO:0030134,GO:0030135,GO:0030173,GO:0030176,GO:0031090,GO:0031224,GO:0031227,GO:0031228,GO:0031300,GO:0031301,GO:0031410,GO:0031982,GO:0031984,GO:0033036,GO:0034613,GO:0042175,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046907,GO:0048193,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070727,GO:0071702,GO:0071705,GO:0097708,GO:0098588,GO:0098791,GO:0098827
EggNOG free text desc.vesicle-mediated transport
EggNOG OGsCOG0445@1,KOG2667@2759
COG Functional cat.D
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionFatty acid desaturase
Ec32 orthologEc-01_000090.1
Exons6
Model size1035
Cds size1035
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17763.4673.1prot_H-elongata_contig17763.4673.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig17763 3611..6463 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930027.179043-CDS-H-elongata_contig17763:3610..38101622930027.179043-CDS-H-elongata_contig17763:3610..3810Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17763 3611..3810 -
1691679252.0230165-CDS-H-elongata_contig17763:3610..38101691679252.0230165-CDS-H-elongata_contig17763:3610..3810Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17763 3611..3810 -
1622930027.1997948-CDS-H-elongata_contig17763:3936..42001622930027.1997948-CDS-H-elongata_contig17763:3936..4200Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17763 3937..4200 -
1691679252.034936-CDS-H-elongata_contig17763:3936..42001691679252.034936-CDS-H-elongata_contig17763:3936..4200Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17763 3937..4200 -
1622930027.2109337-CDS-H-elongata_contig17763:4629..48191622930027.2109337-CDS-H-elongata_contig17763:4629..4819Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17763 4630..4819 -
1691679252.0438395-CDS-H-elongata_contig17763:4629..48191691679252.0438395-CDS-H-elongata_contig17763:4629..4819Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17763 4630..4819 -
1622930027.221677-CDS-H-elongata_contig17763:5249..53301622930027.221677-CDS-H-elongata_contig17763:5249..5330Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17763 5250..5330 -
1691679252.0554993-CDS-H-elongata_contig17763:5249..53301691679252.0554993-CDS-H-elongata_contig17763:5249..5330Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17763 5250..5330 -
1622930027.2323444-CDS-H-elongata_contig17763:5920..60761622930027.2323444-CDS-H-elongata_contig17763:5920..6076Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17763 5921..6076 -
1691679252.0631337-CDS-H-elongata_contig17763:5920..60761691679252.0631337-CDS-H-elongata_contig17763:5920..6076Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17763 5921..6076 -
1622930027.2455766-CDS-H-elongata_contig17763:6319..64631622930027.2455766-CDS-H-elongata_contig17763:6319..6463Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17763 6320..6463 -
1691679252.0707476-CDS-H-elongata_contig17763:6319..64631691679252.0707476-CDS-H-elongata_contig17763:6319..6463Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17763 6320..6463 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig17763.4673.1

>prot_H-elongata_contig17763.4673.1 ID=prot_H-elongata_contig17763.4673.1|Name=mRNA_H-elongata_contig17763.4673.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=345bp
TFHSISCLEVHVDAMDVAGENQIDIDHDMLKQRLGPDGIAIGEPFAEVPG
EGDNSLELPEDYCGSCYGARKDCCNTCRDVADAYNALGWALHDIRRTAEQ
CIRDNHMENPLVEGEGCRLSGFMSVNKVSGNFHVAAGEGVMRDGKHIHLY
NHDDAVAFNSSHTIHRLSFGEPFPGMRPNPLDGASRIIDEDISTGLFQYF
VKLVPTVRWVGPHPAGDASVKVGEPATLTSQFSYTYKFRSLKGETEYKKE
RADGDDLPHHDAAHGQEKDARLNAVILPAGVFFMYDVSPFMVEIIPVKNM
PLPHLLIRLCAVAGGAFAVSSIVDSVVFHVSNRLRRRRSSLLGR*
back to top

mRNA from alignment at H-elongata_contig17763:3611..6463-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig17763.4673.1 ID=mRNA_H-elongata_contig17763.4673.1|Name=mRNA_H-elongata_contig17763.4673.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2853bp|location=Sequence derived from alignment at H-elongata_contig17763:3611..6463- (Himanthalia elongata Himel1 dioecious)
ACATTCCACTCGATATCTTGTCTAGAGGTCCACGTTGATGCAATGGATGT GGCGGGAGAAAACCAAATAGACATCGATCACGATATGCTAAAGCAGCGAC TCGGTCCAGACGGTATCGCCATCGGGGAACCCTTCGCCGAAGTGGTGAGT GAGTGTTGCCGGCGGCTCTGCGTCCCAATGTTTCGGTGAAGGAGCAGGTT TCTGTCGAGAAAAGCCAATGATCAAGCTTCGACAACCTGACACATCCAAA ACTACCCGAGACACCTTTCTTGCATTGGAGCTATCTAGTACTCCTGGAAT AGAGCAGAATTATGCGCCGCCCATACGGTATCACCGTTGTAAAGAGAACC GACACGCTCGTCGATCGATCGATCGATTTACCCGCAGCCGGGCGAAGGCG ACAACAGCCTCGAGCTGCCGGAGGACTACTGTGGTAGTTGCTACGGGGCA AGAAAGGACTGCTGTAACACCTGCAGGGACGTAGCGGACGCTTACAACGC GTTGGGCTGGGCATTGCACGACATTCGTAGGACGGCAGAACAGGTGACTC GTGATCTAGATACCATTCTCGTATCATTTCATCCCGTGTCGTCTCATACG AAGAGAAGTAGGTGCAAGGCTGGAGCCTACCCCCGAAGACTTTGCATAGC CATGCTGGGCTCGCGCGTCGACGCCATATGCTGTACTCGCAATCGCGATA TATTGCCTGCCTCCTGGCGGCGTGCCCTGTGTCCCCCTGTCTTTCAATCT TTTGAGCTTTTGCCAAAAGGGGCGTGACTTTGCCCAGCACGCAGGGTATA CATTTTTGAGCTATTAGCACTGGGGGCTATCTCGTGGTCGAGCGTTCTTC CTACAGCGACTAGAGCTACATATCAACAGGCACTCTTCATAAGGAATATT AAGTTGGTGTACCCATACGTCGTAGGTCCGCATGGCGAGGCAAGACAGGT GGTAGGCTAGATGCTCGCCCACTCTACCCTGCTTATGCCAGACGGTCGGT GAACAAACGTTTTCATGCTTGAGGCAACCCAACTGTACTGGCGATTATCT GCACGTCCTACCCTGGCTCGGAAATTATCACAGGAATGTTATGCTCTATT TTCTTGTCCTTGTTGTTTCTTCGTTCCTGACAGTGCATCAGGGATAACCA CATGGAAAACCCCTTGGTCGAGGGAGAAGGCTGTAGGCTCTCTGGGTTCA TGAGCGTCAACAAGGTGAGATCTTGCGACGGTTGTGGCTCCCAAGACTCT TCGTCTCTTCATCGCAAAGCTACGTACTATTAATAGGTACTGTAGTATAA TATATTGTAGTATAGTATAGTATAGTGTAATATATTGTAGTATAGTATAG TATAGTGTAATATATTGTAATGCAGTATATTATACTGGTTTTGTAGTGAT ACATGTGGTCAAGAACAAGACCACCGCCAAGCTGACGAGGTCCCTTTGCT TTTTATGCATTATCTGCCCAAATATTTGGAAGCTTATTTACCTCCTAGTA GCCAGTTTAGCTGCGATAGGATTTCGTTTCGCCTGATATTGGAAGACGCC ATCTAAACTTGAGAAGATCGTTCGTGTGTCGAGGGTCTTTGGCTCTTAGT TCCTCTTCCGGCAAAGTCGATTAACATACCTCTACGCATATTAGGTGTCG GGAAATTTCCACGTGGCTGCCGGTGAAGGAGTAATGCGCGATGGGAAGCA TATCCATTTATACAACCACGATGACGCGGTGGCCTTCAATAGCAGCCACA CTATCCACCGATTATCCTTTGGGGAGCCGTTTCCGGGCATGCGACCCAAC CCGCTGGACGGCGCGTCGAGGATCATAGATGAAGGTGAGGTCGAGACTGG GCGTCATCAGCTTTTTTGTCCGTGGCGCAACCCTGGCCAGGGAACCTAGA GGTTCTAGCGGCTTAAGTAAAAGGTCCACGGCATTTTCCCTCGGGCGGTA AACTCGACGTGAAATGTTGCATGCTAGCCTCCCCTACACGCGTGAACCAG CCGACCTGGGAGTAACGTCGGGATAAGCAGACGGAATGGATGATTTTATT CTCTCCATCTGACGCTCAACCGCACGCCGACTCCTGCAGATATAGGCATC GGCTTATTCCCCCCTCGGGCGGTAAACTCGACGTGAAATGTCGCATGCTA GCCTTCCCTATACGCGTGAACCAGCCGACCTGGGAGTAACCTCGGGATAA GCAGACGGAGTGGCTGATTTTATTCTCCCCGTCTGACGCTCAACCGCACG CCGACTCCTGCAGATATAAGCACCGGCTTATTCCAGTATTTCGTCAAGCT GGTGCCCACCGTTCGCTGGGTCGGGCCGCATCCAGCCGGTGATGCGTCGG TGAAAGTGGGGGAGCCGGCAACGCTCACGAGCCAGTTCTCGTACACGTAC AAGTTTCGCTCCTTGAAGGGCGAGACGGAGTATAAAAAGGAGCGTGCCGA CGGCGACGACCTTCCACACCATGACGCTGCACACGGTCAGGAGAAGGATG CCAGGCTCAACGCTGTTATTTTGCCAGGTACGCGCGGATGGGGGAATGTG CGACCTAAACGGCCTAGAGTAGGGGGATTTGTATGGCCTGAGCCAAAAAT TCAGAAGATCTGGAACACTAACTGTGTTATTTCTCTCGTGCCCCTTGTCG AAGCAGGTGTGTTTTTTATGTACGACGTGTCACCCTTCATGGTGGAAATA ATTCCGGTCAAGAATATGCCGTTGCCGCACCTGCTGATACGGCTTTGCGC CGTCGCTGGAGGCGCCTTCGCGGTGTCAAGCATCGTTGATTCCGTTGTGT TCCACGTGTCTAACCGATTGCGACGGCGTAGGTCTAGTTTGCTCGGACGT TAG
back to top

Coding sequence (CDS) from alignment at H-elongata_contig17763:3611..6463-

>mRNA_H-elongata_contig17763.4673.1 ID=mRNA_H-elongata_contig17763.4673.1|Name=mRNA_H-elongata_contig17763.4673.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2070bp|location=Sequence derived from alignment at H-elongata_contig17763:3611..6463- (Himanthalia elongata Himel1 dioecious)
ACATTCCACTCGATATCTTGTCTAGAGGTCCACGTTGATGCAATGGATGT
GGCGGGAGAAAACCAAATAGACATCGATCACGATATGCTAAAGCAGCGAC
TCGGTCCAGACGGTATCGCCATCGGGGAACCCTTCGCCGAAGTGACATTC
CACTCGATATCTTGTCTAGAGGTCCACGTTGATGCAATGGATGTGGCGGG
AGAAAACCAAATAGACATCGATCACGATATGCTAAAGCAGCGACTCGGTC
CAGACGGTATCGCCATCGGGGAACCCTTCGCCGAAGTGCCGGGCGAAGGC
GACAACAGCCTCGAGCTGCCGGAGGACTACTGTGGTAGTTGCTACGGGGC
AAGAAAGGACTGCTGTAACACCTGCAGGGACGTAGCGGACGCTTACAACG
CGTTGGGCTGGGCATTGCACGACATTCGTAGGACGGCAGAACAGCCGGGC
GAAGGCGACAACAGCCTCGAGCTGCCGGAGGACTACTGTGGTAGTTGCTA
CGGGGCAAGAAAGGACTGCTGTAACACCTGCAGGGACGTAGCGGACGCTT
ACAACGCGTTGGGCTGGGCATTGCACGACATTCGTAGGACGGCAGAACAG
TGCATCAGGGATAACCACATGGAAAACCCCTTGGTCGAGGGAGAAGGCTG
TAGGCTCTCTGGGTTCATGAGCGTCAACAAGTGCATCAGGGATAACCACA
TGGAAAACCCCTTGGTCGAGGGAGAAGGCTGTAGGCTCTCTGGGTTCATG
AGCGTCAACAAGGTGTCGGGAAATTTCCACGTGGCTGCCGGTGAAGGAGT
AATGCGCGATGGGAAGCATATCCATTTATACAACCACGATGACGCGGTGG
CCTTCAATAGCAGCCACACTATCCACCGATTATCCTTTGGGGAGCCGTTT
CCGGGCATGCGACCCAACCCGCTGGACGGCGCGTCGAGGATCATAGATGA
AGGTGTCGGGAAATTTCCACGTGGCTGCCGGTGAAGGAGTAATGCGCGAT
GGGAAGCATATCCATTTATACAACCACGATGACGCGGTGGCCTTCAATAG
CAGCCACACTATCCACCGATTATCCTTTGGGGAGCCGTTTCCGGGCATGC
GACCCAACCCGCTGGACGGCGCGTCGAGGATCATAGATGAAGATATAAGC
ACCGGCTTATTCCAGTATTTCGTCAAGCTGGTGCCCACCGTTCGCTGGGT
CGGGCCGCATCCAGCCGGTGATGCGTCGGTGAAAGTGGGGGAGCCGGCAA
CGCTCACGAGCCAGTTCTCGTACACGTACAAGTTTCGCTCCTTGAAGGGC
GAGACGGAGTATAAAAAGGAGCGTGCCGACGGCGACGACCTTCCACACCA
TGACGCTGCACACGGTCAGGAGAAGGATGCCAGGCTCAACGCTGTTATTT
TGCCAGATATAAGCACCGGCTTATTCCAGTATTTCGTCAAGCTGGTGCCC
ACCGTTCGCTGGGTCGGGCCGCATCCAGCCGGTGATGCGTCGGTGAAAGT
GGGGGAGCCGGCAACGCTCACGAGCCAGTTCTCGTACACGTACAAGTTTC
GCTCCTTGAAGGGCGAGACGGAGTATAAAAAGGAGCGTGCCGACGGCGAC
GACCTTCCACACCATGACGCTGCACACGGTCAGGAGAAGGATGCCAGGCT
CAACGCTGTTATTTTGCCAGCAGGTGTGTTTTTTATGTACGACGTGTCAC
CCTTCATGGTGGAAATAATTCCGGTCAAGAATATGCCGTTGCCGCACCTG
CTGATACGGCTTTGCGCCGTCGCTGGAGGCGCCTTCGCGGTGTCAAGCAT
CGTTGATTCCGTTGTGTTCCACGTGTCTAACCGATTGCGACGGCGTAGGT
CTAGTTTGCTCGGACGTTAGCAGGTGTGTTTTTTATGTACGACGTGTCAC
CCTTCATGGTGGAAATAATTCCGGTCAAGAATATGCCGTTGCCGCACCTG
CTGATACGGCTTTGCGCCGTCGCTGGAGGCGCCTTCGCGGTGTCAAGCAT
CGTTGATTCCGTTGTGTTCCACGTGTCTAACCGATTGCGACGGCGTAGGT
CTAGTTTGCTCGGACGTTAG
back to top