mRNA_H-elongata_contig17763.4672.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig17763.4672.1
Unique NamemRNA_H-elongata_contig17763.4672.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig17763.4672.1 vs. uniprot
Match: A0A6H5K1W8_9PHAE (SAP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K1W8_9PHAE)

HSP 1 Score: 675 bits (1742), Expect = 1.040e-237
Identity = 310/380 (81.58%), Postives = 342/380 (90.00%), Query Frame = 1
Query:    1 QGIAHRFPAPKPLPLARPPFKFSDVQKIIPRHCFKRNLATSAFHLATDLVLVATFGYLATFIGHASMPGWTEYVLWPIYWFVQGTQMTGVWVIAHECGHQAFSESKTINNLVGLVCHSALLVPYHSWRITHAKHHNNTGSCENDEVFCPSTRSDNKLSPTAAEDITAEMVQEAPLVQAFWIVIMLTFGWMPGYLCFNSSGPSKYRGFHKSHFNPWAKMFEERDRMDIVISDIGFFIALGGIIYMVNVLGFATVGKFYIAPYMITNAYLVLITFLQHTDVFMPHFRGSEWDWFRGALCTVDRSFGVVIDHVIHHIADTHVCHHLFSKMPFYHAQEATEHIRAFLGEYYLSDRTPIPQALWRSYGCCHFVEDIGHTVFYQSR 1140
            +GIAHR+PAPKPLPLARPPFKFSDVQK +PRHCFKRNLATSA HLA+DL++VATFGYLATFI   ++P W  ++LWP YWFVQGTQMTGVWV+AHECGHQ+FSESKT+NNLVGLVCHSALLVPYHSWRITHAKHHNNTGSC NDEVFCP  R+DN  SPTA ED+ AE+V EAPLVQ FWI+ ML  GWMPGYLCFN++GPSKY GF KSHFNPWAKMFEERDRMDIV SD+GFF A+ GI Y V+ LGF TV KFY+ PYM+TNAYLVLIT+LQHTDVFMPHFRGSEWDWFRGALCTVDR+FG VIDHVIHHIADTHVCHHLFSKMPFYHAQEATEHIRAFLG+Y+LSD TPIP+ALWRS+ CC  VED+GHTVFYQ+ 
Sbjct:   66 KGIAHRYPAPKPLPLARPPFKFSDVQKAVPRHCFKRNLATSATHLASDLIMVATFGYLATFISSGAIPAWAGWLLWPTYWFVQGTQMTGVWVLAHECGHQSFSESKTVNNLVGLVCHSALLVPYHSWRITHAKHHNNTGSCTNDEVFCPPVRTDNGKSPTAEEDM-AELVHEAPLVQMFWIIFMLVLGWMPGYLCFNATGPSKYNGFAKSHFNPWAKMFEERDRMDIVTSDLGFFAAVAGICYAVHALGFLTVAKFYLVPYMVTNAYLVLITYLQHTDVFMPHFRGSEWDWFRGALCTVDRTFGPVIDHVIHHIADTHVCHHLFSKMPFYHAQEATEHIRAFLGDYHLSDTTPIPKALWRSFTCCTHVEDVGHTVFYQAH 444          
BLAST of mRNA_H-elongata_contig17763.4672.1 vs. uniprot
Match: A0A835YXB1_9STRA (Fatty acid desaturase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXB1_9STRA)

HSP 1 Score: 560 bits (1443), Expect = 1.710e-192
Identity = 264/380 (69.47%), Postives = 304/380 (80.00%), Query Frame = 1
Query:    1 QGIAHRFPAPKPLPLARPPFKFSDVQKIIPRHCFKRNLATSAFHLATDLVLVATFGYLATFIGHASMPGWTEYVLWPIYWFVQGTQMTGVWVIAHECGHQAFSESKTINNLVGLVCHSALLVPYHSWRITHAKHHNNTGSCENDEVFCPSTRSDNKLSPTAAEDITAEMVQEAPLVQAFWIVIMLTFGWMPGYLCFNSSGPSKYRGFHKSHFNPWAKMFEERDRMDIVISDIGFFIALGGIIYMVNVLGFATVGKFYIAPYMITNAYLVLITFLQHTDVFMPHFRGSEWDWFRGALCTVDRSFGVVIDHVIHHIADTHVCHHLFSKMPFYHAQEATEHIRAFLGEYYLSDRTPIPQALWRSYGCCHFVEDIGHTVFYQSR 1140
            +GIAH FP PKPLPLA+P   F++V+  +P+  F+R++  S  HL +DL L+A  GY AT+IGH ++P W  ++LWP Y FVQGT  TGVWV+AHECGHQAFSES+ +NN VGLVCHSALLVPYHSWRITH KHHNNTGSCENDEVFCP+TRS           +  EM+QE+P+VQAF+I++MLT GWMPGYL FN++GP KY G  KSHFNPWAK F+ RDR+ IV+SDIGFF ALG I Y V  LG ATV  +Y APYM+ N YLVLIT+LQHTDVFMPHFRG EW WFRGALCTVDRSFG +IDH IHHIADTHVCHHLFSKMPFY+AQEATE +R  LGEYYLSD TPIPQALWRSY CC FVED G  VFY+SR
Sbjct:   67 KGIAHPFPPPKPLPLAKPDITFAEVRAALPKRLFQRSMVKSFAHLFSDLALIAAIGYAATWIGHEAVPFWARFLLWPAYIFVQGTVFTGVWVLAHECGHQAFSESEAVNNAVGLVCHSALLVPYHSWRITHGKHHNNTGSCENDEVFCPATRS----------SLKGEMIQESPIVQAFFILVMLTVGWMPGYLIFNATGPPKYNGEAKSHFNPWAKFFDPRDRIGIVVSDIGFFAALGVIAYAVRALGGATVMLYYGAPYMVCNLYLVLITYLQHTDVFMPHFRGDEWSWFRGALCTVDRSFGALIDHTIHHIADTHVCHHLFSKMPFYNAQEATEILREKLGEYYLSDATPIPQALWRSYTCCAFVEDEGSAVFYKSR 436          
BLAST of mRNA_H-elongata_contig17763.4672.1 vs. uniprot
Match: A0A1S7C7Q6_9STRA (Delta-12 fatty acid desaturase n=1 Tax=Nannochloropsis oceanica TaxID=145522 RepID=A0A1S7C7Q6_9STRA)

HSP 1 Score: 500 bits (1287), Expect = 6.390e-169
Identity = 229/378 (60.58%), Postives = 286/378 (75.66%), Query Frame = 1
Query:    7 IAHRFPAPKPLPLARPPFKFSDVQKIIPRHCFKRNLATSAFHLATDLVLVATFGYLATFIGHASMPGWTEYVLWPIYWFVQGTQMTGVWVIAHECGHQAFSESKTINNLVGLVCHSALLVPYHSWRITHAKHHNNTGSCENDEVFCPSTRSDNKLSPTAAEDITAEMVQEAPLVQAFWIVIMLTFGWMPGYLCFNSSGPSKYRGFHKSHFNPWAKMFEERDRMDIVISDIGFFIALGGIIYMVNVLGFATVGKFYIAPYMITNAYLVLITFLQHTDVFMPHFRGSEWDWFRGALCTVDRSFGVVIDHVIHHIADTHVCHHLFSKMPFYHAQEATEHIRAFLGEYYLSDRTPIPQALWRSYGCCHFVEDIGHTVFYQSR 1140
            I  R  APK LPLA PPF  SD++  +PRHCF+R+L+TS FHL  DL+ VA  GYLA+ +GH+ +P  + Y+LWP+YW+ QG+ +TGVWVIAHECGHQ+FS  +++NN  G + HSALLVPYHSWRI+H KHHNNTGSCENDEVF P  +          E++  E++  +PL     I+IMLT GWMPGYL  N++GP KY+G   SHFNP + +F  +DR+DI+ SDIGFF+AL  ++Y     GF TVGK+Y+ PYM+ N +LVLIT+LQHTDVF+PHFRGSEW WFRGALCTVDRSFG ++DH  HHI+DTHVCHH+FSKMPFYHAQEA+EHIR  LG+YYL D TPI +ALWRSY  C +V+    TVFY+ R
Sbjct:   70 ILLRNDAPKSLPLAPPPFTLSDIKNAVPRHCFERSLSTSLFHLTIDLIQVAVLGYLASLLGHSDVPPMSRYILWPLYWYAQGSVLTGVWVIAHECGHQSFSPYESVNNFFGWLLHSALLVPYHSWRISHGKHHNNTGSCENDEVFAPPIK----------EELMDEILLHSPLANLVQIIIMLTIGWMPGYLLLNATGPRKYKGLSNSHFNPNSALFSPKDRLDIIWSDIGFFVALACVVYACVQFGFQTVGKYYLLPYMVVNYHLVLITYLQHTDVFIPHFRGSEWTWFRGALCTVDRSFGWLLDHTFHHISDTHVCHHIFSKMPFYHAQEASEHIRKALGDYYLKDDTPIWKALWRSYTLCKYVDSEETTVFYKQR 437          
BLAST of mRNA_H-elongata_contig17763.4672.1 vs. uniprot
Match: K8YR13_NANGC (Omega-6 fatty acid desaturase delta-12 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YR13_NANGC)

HSP 1 Score: 499 bits (1285), Expect = 2.080e-168
Identity = 231/378 (61.11%), Postives = 287/378 (75.93%), Query Frame = 1
Query:    7 IAHRFPAPKPLPLARPPFKFSDVQKIIPRHCFKRNLATSAFHLATDLVLVATFGYLATFIGHASMPGWTEYVLWPIYWFVQGTQMTGVWVIAHECGHQAFSESKTINNLVGLVCHSALLVPYHSWRITHAKHHNNTGSCENDEVFCPSTRSDNKLSPTAAEDITAEMVQEAPLVQAFWIVIMLTFGWMPGYLCFNSSGPSKYRGFHKSHFNPWAKMFEERDRMDIVISDIGFFIALGGIIYMVNVLGFATVGKFYIAPYMITNAYLVLITFLQHTDVFMPHFRGSEWDWFRGALCTVDRSFGVVIDHVIHHIADTHVCHHLFSKMPFYHAQEATEHIRAFLGEYYLSDRTPIPQALWRSYGCCHFVEDIGHTVFYQSR 1140
            I  R  AP  LPL  PPF  +D++  +PRHCF+R+L TS FHLA DLVLVA  GYLAT IGH  +P  + Y+LWP+YW+ QG+ +TGVWVIAHECGHQ+FS  + +NNLVG V HSALLVPYHSWRI+H KHHNNTGSCENDEVF P  +          ED+  E++  +PL     I+IMLT GWMPGYL  N++GP KY+G + SHF+P + +F  +DR+DI+ SDIGFF+AL G+++     GF+TVGK+Y+ PYM+ N +LVLIT+LQHTDVF+PHFRG+EW WFRGALCTVDRSFG ++DH  HHI+DTHVCHH+FSKMPFYHAQEA+EHI+  LG YYL D TPI +ALWRSY  C +V+   + VFY+ R
Sbjct:   83 ILLRTDAPPSLPLTPPPFTLADIKAAVPRHCFERSLTTSFFHLACDLVLVALLGYLATLIGHPDVPTMSRYLLWPLYWYAQGSVLTGVWVIAHECGHQSFSPYERVNNLVGWVLHSALLVPYHSWRISHGKHHNNTGSCENDEVFAPPIK----------EDLMDEILLHSPLANLAQIIIMLTVGWMPGYLLMNATGPRKYKGKNNSHFDPNSALFSPKDRLDIIWSDIGFFLALAGVVWACTQYGFSTVGKYYLLPYMVVNYHLVLITYLQHTDVFIPHFRGAEWSWFRGALCTVDRSFGWLLDHTFHHISDTHVCHHIFSKMPFYHAQEASEHIKKALGPYYLKDDTPIWKALWRSYTLCKYVDTDKNAVFYKHR 450          
BLAST of mRNA_H-elongata_contig17763.4672.1 vs. uniprot
Match: A0A8K1CR19_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CR19_PYTOL)

HSP 1 Score: 479 bits (1233), Expect = 2.730e-161
Identity = 226/379 (59.63%), Postives = 279/379 (73.61%), Query Frame = 1
Query:    4 GIAHRFPAPKPLPLARPPFKFSDVQKIIPRHCFKRNLATSAFHLATDLVLVATFGYLATFIGHASMPGWTEYVLWPIYWFVQGTQMTGVWVIAHECGHQAFSESKTINNLVGLVCHSALLVPYHSWRITHAKHHNNTGSCENDEVFCPSTRSDNKLSPTAAEDITAEMVQEAPLVQAFWIVIMLTFGWMPGYLCFNSSGPSKYRGFHKSHFNPWAKMFEERDRMDIVISDIGFFIALGGIIYMVNVLGFATVGKFYIAPYMITNAYLVLITFLQHTDVFMPHFRGSEWDWFRGALCTVDRSFGVVIDHVIHHIADTHVCHHLFSKMPFYHAQEATEHIRAFLGEYYLSDRTPIPQALWRSYGCCHFVEDIGHTVFYQSR 1140
            G  H   AP+PLPLA P F   D++  +P HCF+R+  TS +HL  +LV+     Y ATFI  A  PG+  YVLWPIYWF QG  +TG+WVIAHECGHQA+S+S+ +NN +GLV HSALLVPYHSWRI+H +HH+NTGSCENDEVF P TRS  K +         E ++++PL   + I +ML  GWMPGYL FN++GP+KY G  KSHFNPWA M+ +R+R  +V+SDI F  AL GI+Y+V+ L F T+ KFY  PY+I NA+LVLIT+LQHTD ++PHFR  EW W RGALCTVDRSFG  +D V+HHI DTHVCHH+FSKMPFYHAQEATE ++  LG +YL D T IP+ALWRSY  C F+ED G  VFY+SR
Sbjct:   32 GYKHIEGAPEPLPLALPQFSLKDLRAAVPPHCFERSFLTSTYHLIKNLVICTGLFYAATFIDQA--PGFAPYVLWPIYWFFQGAYLTGIWVIAHECGHQAYSDSEVVNNSIGLVLHSALLVPYHSWRISHRRHHSNTGSCENDEVFVPVTRSTYKAN-------WHENLEDSPLYNLYGIFMMLLIGWMPGYLFFNATGPTKYAGEAKSHFNPWAAMYNDRERWMVVVSDIFFGGALAGIVYLVHELSFVTMVKFYFVPYLIVNAFLVLITYLQHTDTYVPHFREGEWSWLRGALCTVDRSFGSFLDSVLHHIVDTHVCHHIFSKMPFYHAQEATEALKPVLGRFYLKDDTSIPRALWRSYNLCKFIEDDGKIVFYRSR 401          
BLAST of mRNA_H-elongata_contig17763.4672.1 vs. uniprot
Match: A0A482S9L4_9ARCH (FA_desaturase domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S9L4_9ARCH)

HSP 1 Score: 477 bits (1227), Expect = 6.150e-161
Identity = 230/371 (61.99%), Postives = 272/371 (73.32%), Query Frame = 1
Query:   28 PKPLPLARPPFKFSDVQKIIPRHCFKRNLATSAFHLATDLVLVATFGYLATFIGH-ASMPGWTEYVLWPIYWFVQGTQMTGVWVIAHECGHQAFSESKTINNLVGLVCHSALLVPYHSWRITHAKHHNNTGSCENDEVFCPSTRSDNKLSPTAAEDITAEMVQEAPLVQAFWIVIMLTFGWMPGYLCFNSSGPSKYRGFHKSHFNPWAKMFEERDRMDIVISDIGFFIALGGIIYMVNVLGFATVGKFYIAPYMITNAYLVLITFLQHTDVFMPHFRGSEWDWFRGALCTVDRSFGVVIDHVIHHIADTHVCHHLFSKMPFYHAQEATEHIRAFLGEYYLSDRTPIPQALWRSYGCCHFVEDIGHTVFYQS 1137
            P  LPL  P F    +   IP HCF+RNL TS  HLA+DL L+A FGYLATFIG+ A++P W+ Y+LWPIYW+ QG+ MTGVWV+AHECGHQAFS S+ INN+ G V HS LLVPYHSWRITH +HHNNTGSCENDEVF PSTR          +D  +EM++E P+ Q F IVIMLT GWMPGYL  N+SGP+KYRG + SHF+P A  F+  +   IV +DI FF  +G + Y +   GF  V  FY+ PY ITNA+LVLIT+LQHTDV+MPHFR  EW W RGALCTVDRSFG ++DH  HHI DTHVCHHLFSKMPFYHA EAT  I+   G+YYL D TPI +ALWRSY  C F+ED G  VFY++
Sbjct:    6 PANLPLEVPTFTLKTLISAIPEHCFERNLFTSLSHLASDLFLIAIFGYLATFIGNSAALPPWSAYLLWPIYWYAQGSVMTGVWVLAHECGHQAFSASELINNIFGTVLHSLLLVPYHSWRITHGRHHNNTGSCENDEVFAPSTR----------KDWGSEMLRETPMAQLFGIVIMLTVGWMPGYLVLNASGPAKYRGQNASHFSPTAAFFKPEEYWLIVQTDIAFFTCVGLLGYAIYTFGFMKVLYFYLIPYFITNAHLVLITYLQHTDVYMPHFRNKEWTWLRGALCTVDRSFGAILDHTFHHITDTHVCHHLFSKMPFYHATEATAAIKKVCGKYYLKDDTPILKALWRSYSTCQFIEDEGDIVFYKN 366          
BLAST of mRNA_H-elongata_contig17763.4672.1 vs. uniprot
Match: U5Q2N4_9STRA (Putative delta-12 fatty acid desaturase n=1 Tax=Pythium aphanidermatum TaxID=65070 RepID=U5Q2N4_9STRA)

HSP 1 Score: 459 bits (1182), Expect = 1.080e-153
Identity = 218/379 (57.52%), Postives = 270/379 (71.24%), Query Frame = 1
Query:    4 GIAHRFPAPKPLPLARPPFKFSDVQKIIPRHCFKRNLATSAFHLATDLVLVATFGYLATFIGHASMPGWTEYVLWPIYWFVQGTQMTGVWVIAHECGHQAFSESKTINNLVGLVCHSALLVPYHSWRITHAKHHNNTGSCENDEVFCPSTRSDNKLSPTAAEDITAEMVQEAPLVQAFWIVIMLTFGWMPGYLCFNSSGPSKYRGFHKSHFNPWAKMFEERDRMDIVISDIGFFIALGGIIYMVNVLGFATVGKFYIAPYMITNAYLVLITFLQHTDVFMPHFRGSEWDWFRGALCTVDRSFGVVIDHVIHHIADTHVCHHLFSKMPFYHAQEATEHIRAFLGEYYLSDRTPIPQALWRSYGCCHFVEDIGHTVFYQSR 1140
            G  H   AP+PLPL  P F   D++  IP HCF+R+   S +HL  +LV+ A   Y +TFI  A  PG+  YVLWP YWF QG+ +TG+WVIAHECGHQA+ +S+ +NN +GLV HSALLVPYHSWRI+H +HH+NTGSCENDEVF P TR       T       E ++++PL  A+ I +ML  GWMPGYL FN++GPSKY G  +SHFNPWA M+ +R+R  IV+SDI F   +  +I++V   GF  + KFY  PY I N YLVLIT+LQHTD ++PHFR  EW+W RGALCTVDRSFG  +D V+HHI DTHV HH+FSKMPFYHA+EATE I+  LG +YL D TPIP ALWRSY  C FVED G  VFY+++
Sbjct:   28 GYKHVEGAPQPLPLDLPHFSLKDLRAAIPAHCFERSFVRSTYHLLKNLVICAALFYASTFIDQA--PGYLPYVLWPTYWFFQGSYLTGIWVIAHECGHQAYCDSEVVNNAIGLVLHSALLVPYHSWRISHRRHHSNTGSCENDEVFVPVTR-------TVYAAHWVENLEDSPLYNAYKIFMMLAVGWMPGYLFFNATGPSKYEGKPRSHFNPWAAMYNDRERWMIVLSDIFFGGMIAALIWLVYEFGFLAMTKFYFVPYFIVNGYLVLITYLQHTDTYVPHFREGEWNWLRGALCTVDRSFGKYLDGVLHHIVDTHVTHHIFSKMPFYHAEEATEAIKPILGRFYLKDETPIPLALWRSYNYCKFVEDDGKIVFYKNK 397          
BLAST of mRNA_H-elongata_contig17763.4672.1 vs. uniprot
Match: A0A662XTH7_9STRA (FA_desaturase domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XTH7_9STRA)

HSP 1 Score: 455 bits (1171), Expect = 8.950e-151
Identity = 213/379 (56.20%), Postives = 271/379 (71.50%), Query Frame = 1
Query:    4 GIAHRFPAPKPLPLARPPFKFSDVQKIIPRHCFKRNLATSAFHLATDLVLVATFGYLATFIGHASMPGWTEYVLWPIYWFVQGTQMTGVWVIAHECGHQAFSESKTINNLVGLVCHSALLVPYHSWRITHAKHHNNTGSCENDEVFCPSTRSDNKLSPTAAEDITAEMVQEAPLVQAFWIVIMLTFGWMPGYLCFNSSGPSKYRGFHKSHFNPWAKMFEERDRMDIVISDIGFFIALGGIIYMVNVLGFATVGKFYIAPYMITNAYLVLITFLQHTDVFMPHFRGSEWDWFRGALCTVDRSFGVVIDHVIHHIADTHVCHHLFSKMPFYHAQEATEHIRAFLGEYYLSDRTPIPQALWRSYGCCHFVEDIGHTVFYQSR 1140
            G  H   AP PLPL  P F   +++  IP+HCF+R+  TS +++  ++V      Y ATFI  A  P   ++ LWP+YWF+QG+ +TG+WV+AHECGHQA+  S+ +NNL+GLV HSALLVPYHSWRI+H KHH+NTGSCENDEVF P TRS         E    E V++APL Q + IV ML  GWMPGYL FN++GPSKY G  +SHFNP++ ++ +R+R  IV+SDI   + L  +  +V     AT+ KFY  PYMI NAYLVLIT+LQHTD ++PHFR  EW+W RGALCTVDRSFG  +DHV+H I DTHVCHH+FSKMPFYH +EAT  I+  LG++YL D TP+P ALWRSY CC F+ED G  VFY+++
Sbjct:  113 GYTHVEGAPAPLPLELPHFSLRELRAAIPKHCFERSFVTSTYYMIKNVVTCTALFYAATFIDRA--PVALQFALWPVYWFLQGSYLTGIWVVAHECGHQAYCSSEVVNNLIGLVLHSALLVPYHSWRISHRKHHSNTGSCENDEVFVPVTRS-------VIESTWNESVEDAPLYQLYRIVYMLVVGWMPGYLFFNATGPSKYWGKPRSHFNPYSAIYADRERWMIVLSDIFLVLMLAVLSVLVYTFSLATMIKFYFVPYMIVNAYLVLITYLQHTDTYIPHFREGEWNWLRGALCTVDRSFGSYLDHVVHRIVDTHVCHHIFSKMPFYHCEEATNAIKPLLGKFYLKDSTPVPLALWRSYTCCKFIEDDGKVVFYKNK 482          
BLAST of mRNA_H-elongata_contig17763.4672.1 vs. uniprot
Match: A0A2D4BL06_PYTIN (Putative delta-12 fatty acid desaturase n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BL06_PYTIN)

HSP 1 Score: 451 bits (1159), Expect = 3.260e-150
Identity = 214/379 (56.46%), Postives = 264/379 (69.66%), Query Frame = 1
Query:    4 GIAHRFPAPKPLPLARPPFKFSDVQKIIPRHCFKRNLATSAFHLATDLVLVATFGYLATFIGHASMPGWTEYVLWPIYWFVQGTQMTGVWVIAHECGHQAFSESKTINNLVGLVCHSALLVPYHSWRITHAKHHNNTGSCENDEVFCPSTRSDNKLSPTAAEDITAEMVQEAPLVQAFWIVIMLTFGWMPGYLCFNSSGPSKYRGFHKSHFNPWAKMFEERDRMDIVISDIGFFIALGGIIYMVNVLGFATVGKFYIAPYMITNAYLVLITFLQHTDVFMPHFRGSEWDWFRGALCTVDRSFGVVIDHVIHHIADTHVCHHLFSKMPFYHAQEATEHIRAFLGEYYLSDRTPIPQALWRSYGCCHFVEDIGHTVFYQSR 1140
            G  H   AP PLPL  P F   D++  IP HCF+R+   S +HL  +L +     Y AT I  A  PG  +  LWP+YWF+QG+ +TGVWVIAHECGHQA+  S+ +NN +GLV HSALLVPYHSWRI+H +HH+NTGSCENDEVF P TRS             +E ++++PL   + IV MLT GWMPGYL FN++GP+KY G  KSHFNPWA M+ +R+R  I +SD+ F  A+  + ++V  L F  + K Y  PY+I NAYLVLIT+LQHTD ++PHFR  EW W RGALCTVDRSFG  +D V+HHI DTHVCHH+FSKMPFYHAQEAT+ I+  LG +YL D T IP ALWRSY  C FVED G  VFY+ +
Sbjct:   29 GFTHVSGAPAPLPLELPQFSLKDLRAAIPAHCFERSFVRSTYHLIKNLAICGALFYAATLIDRA--PGAAQLALWPLYWFLQGSYLTGVWVIAHECGHQAYCSSEVVNNAIGLVLHSALLVPYHSWRISHRRHHSNTGSCENDEVFVPVTRS-------VYAATWSEHLEDSPLYNLYRIVTMLTVGWMPGYLFFNATGPAKYNGKPKSHFNPWAAMYNDRERWMIALSDVFFGGAVAALAWLVYHLSFVVMLKLYFVPYLIVNAYLVLITYLQHTDTYIPHFREGEWSWLRGALCTVDRSFGAFLDGVLHHIVDTHVCHHIFSKMPFYHAQEATDAIKPLLGRFYLKDDTSIPLALWRSYNYCKFVEDDGKIVFYKKK 398          
BLAST of mRNA_H-elongata_contig17763.4672.1 vs. uniprot
Match: A0A7S3HL52_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HL52_9STRA)

HSP 1 Score: 449 bits (1155), Expect = 3.540e-149
Identity = 213/369 (57.72%), Postives = 267/369 (72.36%), Query Frame = 1
Query:   40 PLARPPFKFSDVQKIIPRHCFKRNLATSAFHLATDLVLVATFGYLATFIGHASM---PGWTEYVLWPIYWFVQGTQMTGVWVIAHECGHQAFSESKTINNLVGLVCHSALLVPYHSWRITHAKHHNNTGSCENDEVFCPSTRSDNKLSPTAAEDITAEMVQEAPLVQAFWIVIMLTFGWMPGYLCFNSSGPSKYRGFHKSHFNPWAKMFEERDRMDIVISDIGFFIALGGIIYMVNVLGFATVGKFYIAPYMITNAYLVLITFLQHTDVFMPHFRGSEWDWFRGALCTVDRSFGVVIDHVIHHIADTHVCHHLFSKMPFYHAQEATEHIRAFLGEYYLSDRTPIPQALWRSYGCCHFVEDIGHTVFYQS 1137
            PLA P F    ++  IP HCFKR+L  S  +LATDL+ +A FGYLAT+I   ++   P W+ YVLWP+YWF+QG+ MTGVWV+AHECGHQ+FSES+  NN+VG +CHS LLVPYH WR+TH  HHNNTGSCENDEVF P+TR       TA      EM++E P+   + I +MLT GW+PGYL FN++GP KY G + +HF+P A  F+  +   +V S+I +F A G +I  +N  GF+ V  +YIAPYMI N  LVLIT+LQHTDVF+PHFRG+EW+W RGA+CTVDR FG  ++  +HHI DTHVCHHLFSKMPFYHA+EAT HI+  LG YYL D TPI  A +RS+ CC FVED    VFY++
Sbjct:   68 PLAPPTFTLKMIKDAIPEHCFKRSLTKSLGYLATDLIKIAIFGYLATYISSPALSFLPNWSPYVLWPLYWFIQGSVMTGVWVLAHECGHQSFSESELANNIVGTICHSLLLVPYHPWRVTHGLHHNNTGSCENDEVFTPTTR-------TAW---AGEMLRETPIANLWGIFLMLTVGWIPGYLVFNATGPQKYHGKNANHFSPTAVFFKPNEYWLVVQSNIAWFAAAGLLIAAINHFGFSNVWCYYIAPYMIVNKNLVLITYLQHTDVFVPHFRGAEWNWLRGAICTVDRDFGFFMNRALHHITDTHVCHHLFSKMPFYHAEEATVHIKRVLGPYYLYDPTPISTACYRSFSCCQFVEDADPIVFYKN 426          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17763.4672.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K1W8_9PHAE1.040e-23781.58SAP domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835YXB1_9STRA1.710e-19269.47Fatty acid desaturase n=1 Tax=Tribonema minus TaxI... [more]
A0A1S7C7Q6_9STRA6.390e-16960.58Delta-12 fatty acid desaturase n=1 Tax=Nannochloro... [more]
K8YR13_NANGC2.080e-16861.11Omega-6 fatty acid desaturase delta-12 n=3 Tax=Mon... [more]
A0A8K1CR19_PYTOL2.730e-16159.63Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A482S9L4_9ARCH6.150e-16161.99FA_desaturase domain-containing protein n=1 Tax=ar... [more]
U5Q2N4_9STRA1.080e-15357.52Putative delta-12 fatty acid desaturase n=1 Tax=Py... [more]
A0A662XTH7_9STRA8.950e-15156.20FA_desaturase domain-containing protein n=2 Tax=No... [more]
A0A2D4BL06_PYTIN3.260e-15056.46Putative delta-12 fatty acid desaturase n=2 Tax=Py... [more]
A0A7S3HL52_9STRA3.540e-14957.72Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17763contigH-elongata_contig17763:1083..3420 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score565.5
Seed ortholog evalue1.6e-158
Seed eggNOG ortholog2880.D7FQQ2
Preferred nameFAD2
KEGG rclassRC00917
KEGG koko:K10256,ko:K21704,ko:K21710,ko:K21736
KEGG ReactionR11043,R11044
KEGG Pathwayko01040,ko01212,map01040,map01212
GOsGO:0003674,GO:0003824,GO:0004497,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0008150,GO:0008152,GO:0012505,GO:0016020,GO:0016021,GO:0016491,GO:0016705,GO:0016709,GO:0030176,GO:0031224,GO:0031227,GO:0031984,GO:0042175,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045485,GO:0050183,GO:0055114,GO:0098827
EggNOG free text desc.oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water
EggNOG OGs2QQNB@2759,COG3239@1
EC1.14.18.4,1.14.19.16,1.14.19.22,1.14.19.33,1.14.19.34,1.14.19.6
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01004
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSAP domain
Ec32 orthologEc-01_000100.1
Exons2
Model size2083
Cds size945
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17763.4672.1prot_H-elongata_contig17763.4672.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig17763 1281..2480 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930027.074682-UTR-H-elongata_contig17763:1082..12801622930027.074682-UTR-H-elongata_contig17763:1082..1280Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17763 1083..1280 +
1691679251.9690652-UTR-H-elongata_contig17763:1082..12801691679251.9690652-UTR-H-elongata_contig17763:1082..1280Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17763 1083..1280 +
1622930027.1256533-UTR-H-elongata_contig17763:2480..34201622930027.1256533-UTR-H-elongata_contig17763:2480..3420Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17763 2481..3420 +
1691679252.0114574-UTR-H-elongata_contig17763:2480..34201691679252.0114574-UTR-H-elongata_contig17763:2480..3420Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17763 2481..3420 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930027.0887547-CDS-H-elongata_contig17763:1280..17331622930027.0887547-CDS-H-elongata_contig17763:1280..1733Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17763 1281..1733 +
1691679251.9818382-CDS-H-elongata_contig17763:1280..17331691679251.9818382-CDS-H-elongata_contig17763:1280..1733Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17763 1281..1733 +
1622930027.1057305-CDS-H-elongata_contig17763:1988..24801622930027.1057305-CDS-H-elongata_contig17763:1988..2480Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17763 1989..2480 +
1691679251.9930522-CDS-H-elongata_contig17763:1988..24801691679251.9930522-CDS-H-elongata_contig17763:1988..2480Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17763 1989..2480 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig17763.4672.1

>prot_H-elongata_contig17763.4672.1 ID=prot_H-elongata_contig17763.4672.1|Name=mRNA_H-elongata_contig17763.4672.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=315bp
MPGWTEYVLWPIYWFVQGTQMTGVWVIAHECGHQAFSESKTINNLVGLVC
HSALLVPYHSWRITHAKHHNNTGSCENDEVFCPSTRSDNKLSPTAAEDIT
AEMVQEAPLVQAFWIVIMLTFGWMPGYLCFNSSGPSKYRGFHKSHFNPWA
KMFEERDRMDIVISDIGFFIALGGIIYMVNVLGFATVGKFYIAPYMITNA
YLVLITFLQHTDVFMPHFRGSEWDWFRGALCTVDRSFGVVIDHVIHHIAD
THVCHHLFSKMPFYHAQEATEHIRAFLGEYYLSDRTPIPQALWRSYGCCH
FVEDIGHTVFYQSR*
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mRNA from alignment at H-elongata_contig17763:1083..3420+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig17763.4672.1 ID=mRNA_H-elongata_contig17763.4672.1|Name=mRNA_H-elongata_contig17763.4672.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2338bp|location=Sequence derived from alignment at H-elongata_contig17763:1083..3420+ (Himanthalia elongata Himel1 dioecious)
CAGGGCATCGCACACCGCTTCCCGGCACCGAAGCCGCTTCCATTGGCCCG GCCACCGTTCAAGTTCTCCGACGTACAGAAGATCATCCCCCGACATTGCT TCAAGAGGAACCTGGCCACGTCTGCCTTCCATTTAGCCACCGACCTCGTT CTAGTGGCCACCTTCGGATACTTGGCGACGTTTATCGGACACGCGAGTAT GCCGGGATGGACCGAGTACGTGCTGTGGCCGATTTACTGGTTCGTCCAGG GCACGCAGATGACCGGCGTGTGGGTCATCGCTCACGAGTGCGGCCATCAA GCGTTTTCCGAGTCGAAGACCATCAACAACCTGGTGGGGCTGGTGTGTCA CTCCGCGCTTCTAGTTCCGTACCACTCGTGGAGGATTACACACGCCAAGC ACCACAACAACACTGGGTCGTGCGAGAACGACGAGGTATTCTGTCCATCC ACGCGCTCCGACAACAAGCTGTCCCCTACCGCTGCCGAGGATATCACGGC GGAGATGGTGCAGGAAGCACCTCTGGTGCAGGCGTTCTGGATCGTGATCA TGCTTACCTTTGGTTGGATGCCCGGATACCTTTGTTTCAACTCTTCAGGC CCCTCTAAGTACCGAGGTTTCCACAAGAGCCACTTTAACCCCTGGGCGAA GGTGTGAATACTCTATATATCTATATATATCCACGAAAGTGCGAATAGTC GCCGGTGCTCCTACGGTTGGTCTTGATCATGCAATCATGTCGCATTCGTT CAAATTAGCGATATTGAGTTACTAAGGACAGGCGGGTATAGTATAAACAT TAGAGTTCAGTTCAACCTCACTGATGACATCATCAACGTGCCTTTGTCCT TCCCCTTGTGCCCTTAATTAATTTATACCTTTCTGGTATCTACGTCAAAT CGACAGATGTTTGAAGAACGCGACCGCATGGACATCGTGATCTCCGATAT CGGGTTCTTCATCGCACTGGGCGGCATTATCTACATGGTGAACGTGTTAG GCTTCGCGACAGTGGGCAAGTTCTACATCGCCCCTTACATGATTACCAAT GCGTACCTCGTGCTCATCACATTCCTTCAGCACACGGACGTGTTCATGCC ACACTTCCGAGGCAGCGAGTGGGACTGGTTCCGCGGAGCACTGTGCACCG TCGACCGTTCCTTTGGCGTCGTGATCGACCACGTCATCCACCATATCGCC GACACACACGTGTGCCACCACTTGTTCAGCAAGATGCCGTTCTATCACGC GCAGGAGGCCACCGAGCACATTCGAGCATTCCTCGGAGAATACTATCTCT CGGACCGCACGCCAATCCCGCAAGCGTTGTGGAGGTCCTACGGTTGCTGC CACTTCGTGGAGGACATCGGACACACGGTTTTCTACCAGTCTCGTTAACT TGGCCCAGCAAATCTTGTGTGAAGATAAGACGTGTCGATCTCTGGCGTAC AAGTGATGTTCCAAGCCACAACGATAGCAGACTGTCTTGAGCTCGCTGTC AGATGCTGTTTTGTCGATATTTCTTATCTTTTTAAGGTTTGTTTTGATGG AGGGTCATCCCGAAAATGTCCTAAAATAGAAGGATCGTATCGATAGTTAC GGATAGCGAGAAACAGACGATTCAAAGGTAAACGGGAACTAACTAATAAT AGGACCCCTGAAAATGTCACGTCATGAGCTACTGCTTAGGGAGCAAAGGG TGAACAATGATCCGTGTTATCGACATCCTCATTTTGATCGACCTTAGTGT GCGAGGGGCCGAAGAAAGCTCGAAGCGCCGTAGAGGCGCTTGCTTATCAC GGAGATATCACGCTAGCTAGTCGGAGGCAACCCCATTGCATTTGCCTCCG AGACAAAGTTTTGGCAAGATGTCGAGGATACGTTATTTTCCTCGAATCAT GCAATCTAAATGTTTCCTTCAGATGACTGCAATGGCAAAGCTCCAAAAGC GTATATCTGGGTTTACAGACGGTTGTGAGAGATTCGCCAAGCATTGCAAT TCCATCACCTGGGTAGTGAGCAGTTGTCGATTCATGCCCTTTGCAATGAG GCTGAGGGTCATAGTTTGTCCGATGTGACGAGTCCAAGTGCTTTCATCAG TCTCGTCGTGGACATTTCTACGAATATTGCGTCTTGCGGTCAGGTGTGCT TGTTGGAACTGAAAAGTCAGGGTGATATTTGTTTGATACTTTTTGAAAGG GACGACGCTGCTACAACTGCTACAAGGACTGTTTGAGGTTAGTTTGTCAA GTAATGTTGGTTTATATTGTATTTACGTTGTCAAATAGGTCTATTTCAAT AGCTTTGTATTGATTAAATATACCGTTCTACTAATATT
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Coding sequence (CDS) from alignment at H-elongata_contig17763:1083..3420+

>mRNA_H-elongata_contig17763.4672.1 ID=mRNA_H-elongata_contig17763.4672.1|Name=mRNA_H-elongata_contig17763.4672.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1890bp|location=Sequence derived from alignment at H-elongata_contig17763:1083..3420+ (Himanthalia elongata Himel1 dioecious)
ATGCCGGGATGGACCGAGTACGTGCTGTGGCCGATTTACTGGTTCGTCCA
GGGCACGCAGATGACCGGCGTGTGGGTCATCGCTCACGAGTGCGGCCATC
AAGCGTTTTCCGAGTCGAAGACCATCAACAACCTGGTGGGGCTGGTGTGT
CACTCCGCGCTTCTAGTTCCGTACCACTCGTGGAGGATTACACACGCCAA
GCACCACAACAACACTGGGTCGTGCGAGAACGACGAGGTATTCTGTCCAT
CCACGCGCTCCGACAACAAGCTGTCCCCTACCGCTGCCGAGGATATCACG
GCGGAGATGGTGCAGGAAGCACCTCTGGTGCAGGCGTTCTGGATCGTGAT
CATGCTTACCTTTGGTTGGATGCCCGGATACCTTTGTTTCAACTCTTCAG
GCCCCTCTAAGTACCGAGGTTTCCACAAGAGCCACTTTAACCCCTGGGCG
AAGATGCCGGGATGGACCGAGTACGTGCTGTGGCCGATTTACTGGTTCGT
CCAGGGCACGCAGATGACCGGCGTGTGGGTCATCGCTCACGAGTGCGGCC
ATCAAGCGTTTTCCGAGTCGAAGACCATCAACAACCTGGTGGGGCTGGTG
TGTCACTCCGCGCTTCTAGTTCCGTACCACTCGTGGAGGATTACACACGC
CAAGCACCACAACAACACTGGGTCGTGCGAGAACGACGAGGTATTCTGTC
CATCCACGCGCTCCGACAACAAGCTGTCCCCTACCGCTGCCGAGGATATC
ACGGCGGAGATGGTGCAGGAAGCACCTCTGGTGCAGGCGTTCTGGATCGT
GATCATGCTTACCTTTGGTTGGATGCCCGGATACCTTTGTTTCAACTCTT
CAGGCCCCTCTAAGTACCGAGGTTTCCACAAGAGCCACTTTAACCCCTGG
GCGAAGATGTTTGAAGAACGCGACCGCATGGACATCGTGATCTCCGATAT
CGGGTTCTTCATCGCACTGGGCGGCATTATCTACATGGTGAACGTGTTAG
GCTTCGCGACAGTGGGCAAGTTCTACATCGCCCCTTACATGATTACCAAT
GCGTACCTCGTGCTCATCACATTCCTTCAGCACACGGACGTGTTCATGCC
ACACTTCCGAGGCAGCGAGTGGGACTGGTTCCGCGGAGCACTGTGCACCG
TCGACCGTTCCTTTGGCGTCGTGATCGACCACGTCATCCACCATATCGCC
GACACACACGTGTGCCACCACTTGTTCAGCAAGATGCCGTTCTATCACGC
GCAGGAGGCCACCGAGCACATTCGAGCATTCCTCGGAGAATACTATCTCT
CGGACCGCACGCCAATCCCGCAAGCGTTGTGGAGGTCCTACGGTTGCTGC
CACTTCGTGGAGGACATCGGACACACGGTTTTCTACCAGTCTCGTTAAAT
GTTTGAAGAACGCGACCGCATGGACATCGTGATCTCCGATATCGGGTTCT
TCATCGCACTGGGCGGCATTATCTACATGGTGAACGTGTTAGGCTTCGCG
ACAGTGGGCAAGTTCTACATCGCCCCTTACATGATTACCAATGCGTACCT
CGTGCTCATCACATTCCTTCAGCACACGGACGTGTTCATGCCACACTTCC
GAGGCAGCGAGTGGGACTGGTTCCGCGGAGCACTGTGCACCGTCGACCGT
TCCTTTGGCGTCGTGATCGACCACGTCATCCACCATATCGCCGACACACA
CGTGTGCCACCACTTGTTCAGCAAGATGCCGTTCTATCACGCGCAGGAGG
CCACCGAGCACATTCGAGCATTCCTCGGAGAATACTATCTCTCGGACCGC
ACGCCAATCCCGCAAGCGTTGTGGAGGTCCTACGGTTGCTGCCACTTCGT
GGAGGACATCGGACACACGGTTTTCTACCAGTCTCGTTAA
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