prot_H-elongata_contig17727.4655.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig17727.4655.1
Unique Nameprot_H-elongata_contig17727.4655.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length210
Homology
BLAST of mRNA_H-elongata_contig17727.4655.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 2.170e-50
Identity = 97/210 (46.19%), Postives = 133/210 (63.33%), Query Frame = 0
Query:    1 LITLSVDCKKLEETTTGDSLADGIKAAVPRHDLEGKVTAITTDCELSIVKMRCLLEESGVCTHISCCNHRLESTTSIMFNGPGIKKVMDLFRGLATRYSKSSQMTDWLAQFVNTYLGVENKKMIQDVVTRWSSTCRMVGRLLELREPVSKHEEMDKLEPLLKAADWAVLEIIHLVLEPFMQTQALLEGRKCVTGSLVRSLIHDLRENLED 210
            L+ L V+CKK    TTG+ L + +KA + R+ L  +  A TTDCE S+VK   LLEE+   TH+ C  HRLES TS  F GPG+ K + L R + TRY+ SSQ +D L Q +   + VE KK++QDV TRW ST   + RLL LR P+++HE +D + PLLK  DW VL+++  + +PF+ +Q   E  K VT SLV   I DLR+ L++
Sbjct:   79 LVALCVECKKHGGRTTGEDLVEAVKAMIARNGLTSRTVATTTDCEPSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARRVVTRYNMSSQASDRLEQ-MRDIVQVERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIPYIADLRDELDE 287          
BLAST of mRNA_H-elongata_contig17727.4655.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE)

HSP 1 Score: 182 bits (462), Expect = 1.500e-49
Identity = 99/210 (47.14%), Postives = 134/210 (63.81%), Query Frame = 0
Query:    1 LITLSVDCKKLEETTTGDSLADGIKAAVPRHDLEGKVTAITTDCELSIVKMRCLLEESGVCTHISCCNHRLESTTSIMFNGPGIKKVMDLFRGLATRYSKSSQMTDWLAQFVNTYLGVENKKMIQDVVTRWSSTCRMVGRLLELREPVSKHEEMDKLEPLLKAADWAVLEIIHLVLEPFMQTQALLEGRKCVTGSLVRSLIHDLRENLED 210
            L+ L ++CKK    T G+ L + +KA + R+ L G+  AITTDCELS+VK   LLEE+   TH+ C  HRLES TS  F GPG+ K + L RG+ TRY+ SSQ +D L Q V   + VE K ++QDV TRW ST   + RL+ LR P+++HE +D   PLLK  DW VL+++  +L+PFM  Q  LE  K VT  LV   I DL++ L++
Sbjct:   35 LVALCLECKKHGWRTAGEDLVEAVKAMIARNGLTGRTVAITTDCELSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARGVVTRYTISSQASDRLEQ-VCDIVQVERKNVVQDVETRWWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYIADLQDGLDE 243          
BLAST of mRNA_H-elongata_contig17727.4655.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI)

HSP 1 Score: 168 bits (426), Expect = 9.350e-46
Identity = 100/207 (48.31%), Postives = 125/207 (60.39%), Query Frame = 0
Query:    4 LSVDCKKLEETTTGDSLADGIKAAVPRHDLEGKVTAITTDCELSIVKMRCLLEESG-VCTHISCCNHRLESTTSIMFNGPGIKKVMDLFRGLATRYSKSSQMTDWLAQFVNTYLGVENKKMIQDVVTRWSSTCRMVGRLLELREPVSKHEEMDKLEPLLKAADWAVLEIIHLVLEPFMQTQALLEGRKCVTGSLVRSLIHDLRENLE 209
            LS+DC K   TTTG+ LA  +   V RHDL G+V A  TDCE S++K   LLE  G   +HI C NHR+ESTTS +FNG  +   + L R L  RY KSSQM   L Q     L +E   ++QDV TRW ST  MV RLL L + +  HE MD++ PLL   DW VL +I  +L PFM+ Q  LEG + VTGS+    + +LRE LE
Sbjct:   73 LSLDCAKHTGTTTGEDLAALVAGMVERHDLTGRVIACVTDCEPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNGRSLG-ALGLARTLVGRYKKSSQMAARLVQLCGI-LQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAELREGLE 277          
BLAST of mRNA_H-elongata_contig17727.4655.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 1.120e-44
Identity = 88/130 (67.69%), Postives = 102/130 (78.46%), Query Frame = 0
Query:    1 LITLSVDCKKLEETTTGDSLADGIKAAVPRHDLEGKVTAITTDCELSIVKM-RCLLEESGVCTHISCCNHRLESTTSIMFNGPGIKKVMDLFRGLATRYSKSSQMTDWLAQFVNTYLGVENKKMIQDVVT 129
            L+TLSVDC K E TTTGD+LA GIKA V +H L GKVTA+TTDCE S+VKM R L  ++ V T I CCN+RLEST+SI+FNGP +KKVM L RGL TRY  SSQ  D L QFV TYLGV+NK++IQDVVT
Sbjct:   70 LVTLSVDCSKSEGTTTGDALAAGIKATVAKHGLTGKVTAVTTDCEPSMVKMGRLLAGDATVSTQIGCCNYRLESTSSIVFNGPRVKKVMVLARGLVTRYPTSSQAADRLKQFVKTYLGVDNKRVIQDVVT 199          
BLAST of mRNA_H-elongata_contig17727.4655.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE)

HSP 1 Score: 157 bits (397), Expect = 1.080e-41
Identity = 93/207 (44.93%), Postives = 122/207 (58.94%), Query Frame = 0
Query:    4 LSVDCKKLEETTTGDSLADGIKAAVPRHDLEGKVTAITTDCELSIVKMRCLLEESGV-CTHISCCNHRLESTTSIMFNGPGIKKVMDLFRGLATRYSKSSQMTDWLAQFVNTYLGVENKKMIQDVVTRWSSTCRMVGRLLELREPVSKHEEMDKLEPLLKAADWAVLEIIHLVLEPFMQTQALLEGRKCVTGSLVRSLIHDLRENLE 209
            LS++C K   +T G+ LA  I + + RH L G+VTA  TDCE S+VK   LLE  G    HI C NHR+ESTTS +FNG  +  +    R +  RY +SSQM+  LA F+   L +    ++QDV TRW S+  M+ RLL L + +  HE  D + P+L   DW VL +I  +L PFMQ Q  LEG K VTGS+    I +LR  LE
Sbjct:  109 LSLNCTKHTGSTHGEDLAREITSMIERHGLTGRVTACVTDCEPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNGKSLGALAKA-RAVVGRYKRSSQMSGRLAVFIGI-LKLSPLSVLQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGELRNGLE 313          
BLAST of mRNA_H-elongata_contig17727.4655.1 vs. uniprot
Match: A0A671UN90_SPAAU (Dimer_Tnp_hAT domain-containing protein n=3 Tax=Sparus aurata TaxID=8175 RepID=A0A671UN90_SPAAU)

HSP 1 Score: 80.9 bits (198), Expect = 3.360e-14
Identity = 61/206 (29.61%), Postives = 95/206 (46.12%), Query Frame = 0
Query:   11 LEETTTGDSLADGIKAAVPRHDLEGK-VTAITTDCELSIVKMRCLLEESGVCTHISCCNHRLESTTSIMFNGPGIKKVMDLFRGLATRYSKSSQMTDWLAQFVNTYLGVENKKMIQDVVTRWSSTCRMVGRLLELREPVSKHEEMDKLEPL------LKAADWAVLEIIHLVLEPFMQTQALLEGRKCVTGSLVRSLIHDLRENLE 209
            LEE  TG ++A  I+ A+ R  +    + A+  D   ++V    +L+E      + C  H L+   S     P I K +   R L   + K S++     +     +G+  KK+IQDV TRW+ST  MV RLLE R P++       + P       LK   WA+LE +   L+ F      L G   VT S +  L+  L+++ +
Sbjct:  121 LEERHTGVNIAAWIEHAIARFQVPASNIVAVVHDNGSNVVLAANILKEKRGWNSVCCAGHTLQLVISHALKHPQITKALGAARCLVEHF-KRSELASSKLKTKQKQMGIPEKKLIQDVSTRWNSTFHMVTRLLEQRWPLTATLSDPTVTPRGKQHLDLKPDQWALLEELAKALQAFESATVYLSGETYVTVSALPPLVRGLQKSTQ 325          
BLAST of mRNA_H-elongata_contig17727.4655.1 vs. uniprot
Match: A0A671UN94_SPAAU (DUF659 domain-containing protein n=1 Tax=Sparus aurata TaxID=8175 RepID=A0A671UN94_SPAAU)

HSP 1 Score: 78.2 bits (191), Expect = 2.360e-13
Identity = 60/206 (29.13%), Postives = 93/206 (45.15%), Query Frame = 0
Query:   11 LEETTTGDSLADGIKAAVPRHDLEGK-VTAITTDCELSIVKMRCLLEESGVCTHISCCNHRLESTTSIMFNGPGIKKVMDLFRGLATRYSKSSQMTDWLAQFVNTYLGVENKKMIQDVVTRWSSTCRMVGRLLELREPVSKHEEMDKLEPL------LKAADWAVLEIIHLVLEPFMQTQALLEGRKCVTGSLVRSLIHDLRENLE 209
            LEE  TG ++A  I+  + R  +    + A+  D   ++V    +L+E      + C  H L+   S     P I K +   R L   + K S++     +     +G+  KK+IQDV TRW+ST  MV RLLE R P+        + P       LK   WA+LE +   L+ F      L G   VT S +  L+  L+++ +
Sbjct:  121 LEERHTGVNIAAWIEHVIARFQVPASNIVAVVHDNGSNVVLAANILKEKHGWNSVRCAGHTLQLVISHALKHPQITKALGAARCLVEHF-KRSELASSKLKTKQKQMGIPEKKLIQDVSTRWNSTFHMVTRLLEQRWPLIATLSDPTVTPRGKQHLDLKPDQWALLEKLAKALQAFESATVYLSGETYVTVSALPPLVRGLQKSTQ 325          
BLAST of mRNA_H-elongata_contig17727.4655.1 vs. uniprot
Match: UPI001EEB43F9 (zinc finger BED domain-containing protein 4-like n=2 Tax=Homalodisca vitripennis TaxID=197043 RepID=UPI001EEB43F9)

HSP 1 Score: 70.9 bits (172), Expect = 8.320e-11
Identity = 54/205 (26.34%), Postives = 94/205 (45.85%), Query Frame = 0
Query:    1 LITLSVDCKKLEETTTGDSLADGIKAAVPRHDLEGKVTAITTDCELSIVKMRCLLEESGVCTHISCCNHRLESTTSIMFNGPGIKKVMDLFRGLATRYSKSSQMTDWLAQFVNTYLGVENKKMIQDVVTRWSSTCRMVGRLLELREPVSKHEEMDKLE-PLLKAADWAVLEIIHLVLEPFMQTQALLEGRKCVTGSLVRSLIHDL 204
            L ++ ++C  +  + T  +LA  I   V +  LEGK+  I +D   +IV     +       H  C  H +             + + D  + + + + +S+  T+ L + V   LG+E KK++  V TRW+ST  M+ R+ EL++ V     +   E P+L   +W     + +VLEPF +    + G   +T S V   I+ L
Sbjct:   52 LKSILLECSVIRSSHTSVNLAVEIDKIVKKFHLEGKIMIIVSDNASNIVGA---ITNELKLKHFGCFAHTINLILQDALKV--CQSLTDRIKAIVSHFKRSTSATEKLRE-VQKNLGLEPKKLVLQVATRWNSTFYMLQRISELKDAVKTTVALINKEIPVLTEDEWKTCSELVMVLEPFEEVTRNISGENYLTASQVIGFINGL 250          
BLAST of mRNA_H-elongata_contig17727.4655.1 vs. uniprot
Match: UPI001EEC5FDD (zinc finger BED domain-containing protein 4-like n=4 Tax=Homalodisca vitripennis TaxID=197043 RepID=UPI001EEC5FDD)

HSP 1 Score: 70.9 bits (172), Expect = 9.860e-11
Identity = 54/205 (26.34%), Postives = 94/205 (45.85%), Query Frame = 0
Query:    1 LITLSVDCKKLEETTTGDSLADGIKAAVPRHDLEGKVTAITTDCELSIVKMRCLLEESGVCTHISCCNHRLESTTSIMFNGPGIKKVMDLFRGLATRYSKSSQMTDWLAQFVNTYLGVENKKMIQDVVTRWSSTCRMVGRLLELREPVSKHEEMDKLE-PLLKAADWAVLEIIHLVLEPFMQTQALLEGRKCVTGSLVRSLIHDL 204
            L ++ ++C  +  + T  +LA  I   V +  LEGK+  I +D   +IV     +       H  C  H +             + + D  + + + + +S+  T+ L + V   LG+E KK++  V TRW+ST  M+ R+ EL++ V     +   E P+L   +W     + +VLEPF +    + G   +T S V   I+ L
Sbjct:  232 LKSILLECSVIRSSHTSVNLAVEIDKIVKKFHLEGKIMIIVSDNASNIVGA---ITNELKLKHFGCFAHTINLILQDALKV--CQSLTDRIKAIVSHFKRSTSATEKLRE-VQKNLGLEPKKLVLQVATRWNSTFYMLQRISELKDAVKTTVALINKEIPVLTEDEWKTCSELVMVLEPFEEVTRNISGENYLTASQVIGFINGL 430          
BLAST of mRNA_H-elongata_contig17727.4655.1 vs. uniprot
Match: A0A4Y2HFD6_ARAVE (Zinc finger BED domain-containing protein 1 n=3 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2HFD6_ARAVE)

HSP 1 Score: 69.3 bits (168), Expect = 3.390e-10
Identity = 49/207 (23.67%), Postives = 102/207 (49.28%), Query Frame = 0
Query:    6 VDCKKLEETTTGDSLADGIKAAVPRHDLEGKVTAITTDCELSIVKMRCLLEESGVCTHISCCNHRLE-STTSIMFNGPGIKKVMDLFRGLATRYSKSSQMTDWLAQFVNTYLGVENKKMIQDVVTRWSSTCRMVGRLLELREPV-SKHEEMDKLEPLLKAADWAVLEIIHLVLEPFMQTQALLEGRKCVTGSLVRSLIHDLRENLED 210
            ++C    E+ T ++LA  +K      +++ K+    +D   +I K    ++E     H  C  H +  +  + +     +K ++   + + T + +S++ ++ L + +    G++ KK+I DV TRW+ST  M+ R  EL   + +    +DK   +L   +W + + I LVL+P  +    + G K  + S V  +I  ++E+L++
Sbjct:  258 LECFLFTESHTSENLATELKKVADEWNIKDKIVLCVSDNAANITKA---IKEILQWRHFGCLAHTINLAVKNSLEVHENVKDLIKKIKSIVTHFKRSTKSSNKLTE-IQKQNGLQPKKLINDVETRWNSTFDMLVRFTELEMSIRTTIALLDKDVDVLLPEEWLLAQKIKLVLQPMKELIDFISGEKYPSASSVIIVIQGIQEDLKE 460          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17727.4655.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJV8_9PHAE2.170e-5046.19Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JHP9_9PHAE1.500e-4947.14Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 13... [more]
D8LCS5_ECTSI9.350e-4648.31Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
A0A6H5L7Y8_9PHAE1.120e-4467.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KUY5_9PHAE1.080e-4144.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A671UN90_SPAAU3.360e-1429.61Dimer_Tnp_hAT domain-containing protein n=3 Tax=Sp... [more]
A0A671UN94_SPAAU2.360e-1329.13DUF659 domain-containing protein n=1 Tax=Sparus au... [more]
UPI001EEB43F98.320e-1126.34zinc finger BED domain-containing protein 4-like n... [more]
UPI001EEC5FDD9.860e-1126.34zinc finger BED domain-containing protein 4-like n... [more]
A0A4Y2HFD6_ARAVE3.390e-1023.67Zinc finger BED domain-containing protein 1 n=3 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR46169FAMILY NOT NAMEDcoord: 15..207
NoneNo IPR availablePANTHERPTHR46169:SF3coord: 15..207
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 9..209

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17727contigH-elongata_contig17727:6484..7113 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17727.4655.1mRNA_H-elongata_contig17727.4655.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig17727 6484..7113 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig17727.4655.1 ID=prot_H-elongata_contig17727.4655.1|Name=mRNA_H-elongata_contig17727.4655.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=210bp
LITLSVDCKKLEETTTGDSLADGIKAAVPRHDLEGKVTAITTDCELSIVK
MRCLLEESGVCTHISCCNHRLESTTSIMFNGPGIKKVMDLFRGLATRYSK
SSQMTDWLAQFVNTYLGVENKKMIQDVVTRWSSTCRMVGRLLELREPVSK
HEEMDKLEPLLKAADWAVLEIIHLVLEPFMQTQALLEGRKCVTGSLVRSL
IHDLRENLED
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf