prot_H-elongata_contig17712.4646.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig17712.4646.1
Unique Nameprot_H-elongata_contig17712.4646.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length51
Homology
BLAST of mRNA_H-elongata_contig17712.4646.1 vs. uniprot
Match: A0A6H5JYH2_9PHAE (RanBD1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYH2_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 1.930e-13
Identity = 32/43 (74.42%), Postives = 37/43 (86.05%), Query Frame = 0
Query:    1 MDPSEVVNGEESEKCTHRTRAKLFRLVDKEWVEMGIGYMKVRR 43
            MDPSEV+NGEE E+CTH+ R KLFRLV+KEW EMGIG +KV R
Sbjct:  400 MDPSEVINGEELEECTHKARGKLFRLVNKEWAEMGIGNLKVLR 442          
BLAST of mRNA_H-elongata_contig17712.4646.1 vs. uniprot
Match: A0A7I8W0M8_9ANNE (DgyrCDS9914 n=1 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8W0M8_9ANNE)

HSP 1 Score: 53.5 bits (127), Expect = 6.400e-7
Identity = 23/41 (56.10%), Postives = 32/41 (78.05%), Query Frame = 0
Query:    1 MDPSEVVNGEESEKCTHRTRAKLFRLVDKEWVEMGIGYMKV 41
            +DP E+V GEE+EK  +++RAKL+R VD EW E GIG +K+
Sbjct:  862 LDPVEIVTGEENEKVLYKSRAKLYRFVDGEWKERGIGDVKI 902          
BLAST of mRNA_H-elongata_contig17712.4646.1 vs. uniprot
Match: UPI0006262143 (E3 SUMO-protein ligase RanBP2 isoform X1 n=4 Tax=Athalia rosae TaxID=37344 RepID=UPI0006262143)

HSP 1 Score: 50.4 bits (119), Expect = 7.870e-6
Identity = 22/42 (52.38%), Postives = 28/42 (66.67%), Query Frame = 0
Query:    5 EVVNGEESEKCTHRTRAKLFRLVDKEWVEMGIGYMKVRRRGE 46
            E+  GEE E   +  +AKLFR VDKEW E G+GY+K+ R  E
Sbjct: 1213 EITTGEEGETMLYCAKAKLFRFVDKEWKERGVGYVKLLRNSE 1254          
BLAST of mRNA_H-elongata_contig17712.4646.1 vs. uniprot
Match: UPI000622FEED (RANBP2-like and GRIP domain-containing protein 5/6 n=1 Tax=Linepithema humile TaxID=83485 RepID=UPI000622FEED)

HSP 1 Score: 50.1 bits (118), Expect = 1.080e-5
Identity = 23/41 (56.10%), Postives = 28/41 (68.29%), Query Frame = 0
Query:    6 VVNGEESEKCTHRTRAKLFRLVDKEWVEMGIGYMKVRRRGE 46
            V+ GEE E   +  RAKLFR VDKEW E G+GY+K+ R  E
Sbjct: 1289 VLTGEEDEDSLYCGRAKLFRFVDKEWKERGVGYVKLLRNAE 1329          
BLAST of mRNA_H-elongata_contig17712.4646.1 vs. uniprot
Match: UPI0013F23360 (E3 SUMO-protein ligase RanBP2 isoform X1 n=2 Tax=Odontomachus brunneus TaxID=486640 RepID=UPI0013F23360)

HSP 1 Score: 50.1 bits (118), Expect = 1.080e-5
Identity = 25/41 (60.98%), Postives = 27/41 (65.85%), Query Frame = 0
Query:    6 VVNGEESEKCTHRTRAKLFRLVDKEWVEMGIGYMKVRRRGE 46
            V  GEE E   +  RAKLFR VDKEW E GIGYMK+ R  E
Sbjct: 1266 VTTGEEDEVTLYCGRAKLFRFVDKEWKERGIGYMKLLRNVE 1306          
BLAST of mRNA_H-elongata_contig17712.4646.1 vs. uniprot
Match: UPI000994ECEA (E3 SUMO-protein ligase RanBP2-like isoform X1 n=4 Tax=Pseudomyrmex gracilis TaxID=219809 RepID=UPI000994ECEA)

HSP 1 Score: 49.7 bits (117), Expect = 1.470e-5
Identity = 23/41 (56.10%), Postives = 28/41 (68.29%), Query Frame = 0
Query:    6 VVNGEESEKCTHRTRAKLFRLVDKEWVEMGIGYMKVRRRGE 46
            V  GEE E   + +RAKLFR VDKEW E G+GY+K+ R  E
Sbjct: 1330 VFTGEEDEDTLYCSRAKLFRFVDKEWKERGVGYVKLLRNTE 1370          
BLAST of mRNA_H-elongata_contig17712.4646.1 vs. uniprot
Match: E2ARH2_CAMFO (E3 SUMO-protein ligase RanBP2 n=1 Tax=Camponotus floridanus TaxID=104421 RepID=E2ARH2_CAMFO)

HSP 1 Score: 49.3 bits (116), Expect = 2.020e-5
Identity = 23/41 (56.10%), Postives = 28/41 (68.29%), Query Frame = 0
Query:    6 VVNGEESEKCTHRTRAKLFRLVDKEWVEMGIGYMKVRRRGE 46
            V  GEE E   + +RAKLFR VDKEW E G+GY+K+ R  E
Sbjct: 1299 VTTGEEDEDTLYCSRAKLFRFVDKEWKERGVGYVKLLRNLE 1339          
BLAST of mRNA_H-elongata_contig17712.4646.1 vs. uniprot
Match: A0A0J7KYF8_LASNI (E3 sumo-protein ligase 2 n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KYF8_LASNI)

HSP 1 Score: 48.9 bits (115), Expect = 2.760e-5
Identity = 23/41 (56.10%), Postives = 27/41 (65.85%), Query Frame = 0
Query:    6 VVNGEESEKCTHRTRAKLFRLVDKEWVEMGIGYMKVRRRGE 46
            V  GEE E   +  RAKLFR VDKEW E G+GY+K+ R  E
Sbjct: 1122 VTTGEEDEDTLYCCRAKLFRFVDKEWKERGVGYVKLLRNME 1162          
BLAST of mRNA_H-elongata_contig17712.4646.1 vs. uniprot
Match: UPI0005F4E61E (E3 SUMO-protein ligase RanBP2-like n=1 Tax=Vollenhovia emeryi TaxID=411798 RepID=UPI0005F4E61E)

HSP 1 Score: 48.5 bits (114), Expect = 3.780e-5
Identity = 24/45 (53.33%), Postives = 29/45 (64.44%), Query Frame = 0
Query:    2 DPSEVVNGEESEKCTHRTRAKLFRLVDKEWVEMGIGYMKVRRRGE 46
            D  EV  GEE+E   +  RAKLFR VDKEW E G+G +K+ R  E
Sbjct: 1269 DKVEVTTGEENEHTLYCGRAKLFRFVDKEWKERGVGDVKLLRNAE 1313          
BLAST of mRNA_H-elongata_contig17712.4646.1 vs. uniprot
Match: UPI0010FB5833 (E3 SUMO-protein ligase RanBP2 n=1 Tax=Nylanderia fulva TaxID=613905 RepID=UPI0010FB5833)

HSP 1 Score: 48.1 bits (113), Expect = 5.170e-5
Identity = 23/41 (56.10%), Postives = 27/41 (65.85%), Query Frame = 0
Query:    6 VVNGEESEKCTHRTRAKLFRLVDKEWVEMGIGYMKVRRRGE 46
            V  GEE E   +  RAKLFR VDKEW E G+GY+K+ R  E
Sbjct: 1289 VTTGEEDEDILYCGRAKLFRFVDKEWKERGVGYVKLLRNIE 1329          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17712.4646.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A6H5JYH2_9PHAE1.930e-1374.42RanBD1 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A7I8W0M8_9ANNE6.400e-756.10DgyrCDS9914 n=1 Tax=Dimorphilus gyrociliatus TaxID... [more]
UPI00062621437.870e-652.38E3 SUMO-protein ligase RanBP2 isoform X1 n=4 Tax=A... [more]
UPI000622FEED1.080e-556.10RANBP2-like and GRIP domain-containing protein 5/6... [more]
UPI0013F233601.080e-560.98E3 SUMO-protein ligase RanBP2 isoform X1 n=2 Tax=O... [more]
UPI000994ECEA1.470e-556.10E3 SUMO-protein ligase RanBP2-like isoform X1 n=4 ... [more]
E2ARH2_CAMFO2.020e-556.10E3 SUMO-protein ligase RanBP2 n=1 Tax=Camponotus f... [more]
A0A0J7KYF8_LASNI2.760e-556.10E3 sumo-protein ligase 2 n=1 Tax=Lasius niger TaxI... [more]
UPI0005F4E61E3.780e-553.33E3 SUMO-protein ligase RanBP2-like n=1 Tax=Vollenh... [more]
UPI0010FB58335.170e-556.10E3 SUMO-protein ligase RanBP2 n=1 Tax=Nylanderia f... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 49..50
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 2..45
IPR000156Ran binding domainPFAMPF00638Ran_BP1coord: 5..44
e-value: 1.3E-7
score: 31.9
IPR000156Ran binding domainPROSITEPS50196RANBD1coord: 1..50
score: 9.245
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 3..49
e-value: 5.0E-11
score: 44.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17712contigH-elongata_contig17712:6197..6349 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17712.4646.1mRNA_H-elongata_contig17712.4646.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig17712 6188..6349 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig17712.4646.1 ID=prot_H-elongata_contig17712.4646.1|Name=mRNA_H-elongata_contig17712.4646.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=51bp
MDPSEVVNGEESEKCTHRTRAKLFRLVDKEWVEMGIGYMKVRRRGERVVP
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000156Ran_bind_dom
IPR011993PH-like_dom_sf