mRNA_H-elongata_contig17692.4640.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig17692.4640.1 vs. uniprot
Match: D7FS74_ECTSI (Ribonuclease Z n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS74_ECTSI) HSP 1 Score: 808 bits (2088), Expect = 3.450e-280 Identity = 512/910 (56.26%), Postives = 595/910 (65.38%), Query Frame = 1
Query: 1 QRFCGEAHVKLGKVNKLFVTGTGAEEHAGLTELILMLSAQSSPTLEVFGPAGIDGLVESVDDINSISKYLKCPEVSAMPLPLGEGESQCSYVLGDEYMEVRCGVVDPARLHSSVGRGKDSSDSSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSNNNGSRGGEEGDS-----------------ANAEIIKVIELDEDSEEGEPNTPSKAEGPVQTPAA-YPD-------PTVPPGVPARGPVVLYRCRVLHGVGSVFLVLSCPSISYVQAVKNHEIFSGARGDNRVLFIIHLSPEDVVEHAAYAPLLKLKGTHVVLGCGHRGRLRGAGGLQHRRVAEKSVQLNFVAPEAFPLHSALRDLGSYSDAH-VKTLVVKHVSGRRVTIGRSLLKAVLLPSSARGIDASAVSPPIDVAAILQDIEQRVEEEGLRGERDRIVRELRECHQTKVDTVAIDAKVAPQQYQPGFSIVAPGSSSTVYPPRDLRPGYGSHVFLRSPXXXXXXXXXSQAFGAPLAKRPRVSVEGGSQASVLTAAPPRPPCLPSVCHSSRAQPPAS-LFSGGGLYGTEVFFLGTGCAAPTKHRGCSGILVRIPQGGLAGDG--TVEGEPLRLLMDAGAGTLGHLERQFGRDGARREIRGLHCVWISHKHADHHTGLFRIIAEHHRAQADPRSTDGKRSSEQASPLIVVAPRSVLKFLEACRKFSGEKVSFQGVRCEETMRRDFWRGGSGSCNG-------FGRKGGTMLLDGMRSVPVVHCNQAYGLVLQLWNGGAKLVYSGDTRPCDRLVKAGVGADLLIHEATFDDSMQKDAVSKCHCTTSEALDVGRRMRAKEIVLTHFSQRYPRVPVLDTERAQHFCVAFDGMVLNRATVGVLPAAARVLSKVLEAKFEE-EDAQELVLP 2619
QRFCGEA VKL KVNKLF+TGTGAEEHAGL+ LIL LSA SP LEVFGP G+D LV + + +CP VS MPLPLG GESQCSYVLGDE+MEVRCGVVDPAR SS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +N + + GE + +G + P A +P P +P G+PARGP VLYRCRVLHG GS FLVLSCP+++YV AV++H I GARG + VLF+ HLSPEDVV+ AAYAPLL LKGTHV+LGCG GR RGAGGLQHR++AE+SVQLNFVAP+AFPLHSAL + + A V + G R +G +L KA+LLP +ARGI+ SAV PP++VA I +D+EQRVEE GLR ERD +V L H G PP L ++ G P + + E G + A + R +P AS GL G EVFFLGTG AAPTK+RGCSGILVRIPQ GL G EG PLRLL+DAG GTLGH ERQFGR+GA REIRGL CVWISHKHADHHTGLFR+IAEHHRA+ R G E A+PL+VVAP +VL F++AC++FSGE +S+Q +RC++ R WRGGSG+ G R+G + LL GMRSV V+HC +AYGLV+QLW GAKLVYSGDTRPCDRLV+AG GA LLIHEATFDDSMQ+DAVSK HCTTSEAL+VGRRMRA E+VLTHFSQRYPRVPVLDTERAQHFCVAFDGMVLN TVGVLPAAA +LS+VLE K E+ +D +E ++P
Sbjct: 58 QRFCGEAGVKLAKVNKLFLTGTGAEEHAGLSGLILTLSALGSPALEVFGPTGVDTLVAGLQAFGP--RVGRCPAVSPMPLPLGPGESQCSYVLGDEHMEVRCGVVDPARSQSSKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVSNKRRADGADSLTPAPRGENKATANGDGAIANPGAGHPKGARADRHPEIPAGIPARGPAVLYRCRVLHGEGSTFLVLSCPNVAYVPAVRDHAIVRGARGKDSVLFVFHLSPEDVVDSAAYAPLLALKGTHVLLGCGREGRRRGAGGLQHRKLAERSVQLNFVAPQAFPLHSALVNTAGHDGADSVSSCEEIGTGGSRTVVGHTLTKAMLLPVAARGINLSAVRPPVEVAEIWEDMEQRVEEAGLRDERDVVVARLWRAH---------------------------GLMRKSGPPSGL----------------------TRESGLPN-ECLNLGGEDGDEEDYDADA------------TMRNEPGASGXXXXXGLGGAEVFFLGTGSAAPTKNRGCSGILVRIPQAGLVGHNGLAAEGAPLRLLIDAGEGTLGHFERQFGREGALREIRGLDCVWISHKHADHHTGLFRLIAEHHRARQASRPAGGG-PREAAAPLVVVAPSAVLTFVKACKEFSGEDISYQAMRCKDLERAWHWRGGSGTRAGPSPSGRRGSRRGVSALLSGMRSVSVIHCREAYGLVVQLWEDGAKLVYSGDTRPCDRLVRAGTGAALLIHEATFDDSMQQDAVSKFHCTTSEALEVGRRMRAGEVVLTHFSQRYPRVPVLDTERAQHFCVAFDGMVLNGNTVGVLPAAANLLSQVLEPKAEDGDDGKEEIVP 902
BLAST of mRNA_H-elongata_contig17692.4640.1 vs. uniprot
Match: A0A5P1FTL7_ASPOF (Ribonuclease Z n=1 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1FTL7_ASPOF) HSP 1 Score: 231 bits (588), Expect = 7.270e-60 Identity = 200/701 (28.53%), Postives = 297/701 (42.37%), Query Frame = 1
Query: 715 GSVFLVLSCPSISYV------QAVKNHEIFSG---ARGDNRVLFIIHLSPEDVVEHAAYAPLLKLKGTHVVLGCGHRGRLRGAGGLQHRRVAEKSVQLNFVAPEAFPL--------HSALRDLGSYSDAHVKTLVVKHVSGRRVTIGRSLLKAVLLPSSARGIDASAVSPPIDVAAILQDIEQRVEEEGLRGERDRIVRELRECHQTKVDTVAIDAKVAPQQYQPGFSIVAPGSSSTVYPPRDLRPGYGSHVFLRSPXXXXXXXXXSQAFGAPLAKRPRVSVEGGSQASVLTAAPPRPPCLPSVCHSSRAQPPASLFSGGGLYGTEVFFLGTGCAAPTKHRGCSGILVRIPQGGLAGDGTVEGEPLRLLMDAGAGTLGHLERQFGRDGARREIRGLHCVWISHKHADHHTGLFRIIAEHHRAQADPRSTDGKRSSEQASPLIVVAPRSVLKFLEACRKFSGEKVSFQGVRCEETMRRDFWRGGSGS------------------CNGFGRKGGTML--------------------LDGMRSVPVVHCNQAYGLVLQLWNG---------GAKLVYSGDTRPCDRLVKAGVGADLLIHEATFDDSMQKDAVSKCHCTTSEALDVGRRMRAKEIVLTHFSQRYPRVPVLDTERAQHFCVAFDGMVLNRATVGVLPAAA---RVLSKVLEAKFEEEDAQELVL 2616
G + L++ CP+ ++ Q ++ + + S G RV IIHLSP V +A Y +K G + GH + L + A S +LN++ P+ FP +S Y + L R++ +LLK L P S G+D SA+ I+ I+ ++ + E +D Q+ S +D+ P ++ + ++A + + + G + S +T PPCL ++ E+ LGTG + P+K+R S I V + G LL+D G GTLG L+R+FG +GA ++GL C+WISH HADHHTGL RI+A + D PL+V+ PRS+ +FL+A + F R D + S S F ++ G+ + L+ + SVPV+HC QA+G+VL+ G KLVYSGDTRPC L+ A A +LIHEATF+DSM+++A++K H TT EA+ VG RA IVLTHFSQRYP+VPV D C+AFD M +N A + VLP +VL + A E +D Q++ +
Sbjct: 334 GPIVLIVDCPTSDHMVELFSLQPLECYYVESSHHPGEGMRRVNCIIHLSPASVTRNADYQTWMKKFGGVQHIMAGHEMKNMEIPVL--KASARISSRLNYLCPQFFPAPGFWSPKNNSFFPQPNGYCEDSSPALA------NRIS-AENLLKFHLRPLSQLGLDHSAIPSMINHKEIVDELLTEIPE-------------------------IVDVSEHVSQFWAAES-------------KDVMPKKAENIIMVEEPWMNEASCSTKANFELVRCKESTCLVDGIEKSGVTQNFDIPPCLENITREDM----------------EIVLLGTGSSQPSKYRNVSSIFVNLFSKG------------SLLLDCGEGTLGQLKRRFGVEGADNAVKGLRCIWISHIHADHHTGLARILALRSQLLKDVPH----------EPLLVIGPRSLKRFLDAYARLEDLDALFLDCRHTTEASLDSFFSSSNSEHDKYQSQETTLFAQDSRMESFWKRPGSPVDIAMAEPLLIRLKSILRDAGLEALYSVPVIHCPQAFGVVLKAAERINSVRKTIPGWKLVYSGDTRPCQSLIDASADATVLIHEATFEDSMEEEAIAKNHSTTKEAIGVGSSARAYRIVLTHFSQRYPKVPVFDEAHMDRTCIAFDLMSINAADLPVLPKVLPYLKVLFRNEMAVDESDDIQDVAV 949
BLAST of mRNA_H-elongata_contig17692.4640.1 vs. uniprot
Match: A0A0U9I784_KLENI (Ribonuclease Z n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9I784_KLENI) HSP 1 Score: 231 bits (588), Expect = 2.290e-59 Identity = 215/703 (30.58%), Postives = 298/703 (42.39%), Query Frame = 1
Query: 715 GSVFLVLSCPSISYVQAVKNHEIFS----GARGDNRVLFIIHLSPEDVVEHAAYAPLLKLKG--THVVLGCGHRGRLRGAGGLQHRRVAEKSVQLNFVAPEAFPLH------SALRDLGSYSDAHVKTLVVKHVSGRRVTIGRSLLKAVLLPSSARGIDASAVSPPIDVAAILQDIEQRVEE--------EGLRGERDRIVRELRECHQTKVDTVAIDAKVAPQQYQPGFSIVAPGSSSTVYPPRDLRPGYGSHVFLRSPXXXXXXXXXSQAFGAPLAK--------------------------RPRVSVEGGSQASVLTAAPPRPPCLPSVCHSSRAQPPASLFSGGGLYGTEVFFLGTGCAAPTKHRGCSGILV-RIPQGGLAGDGTVEGEPLRLLMDAGAGTLGHLERQFGRDGARREIRGLHCVWISHKHADHHTGLFRIIAEHHRAQADPRSTDGKRSSEQASPLIVVAPRSVLKFLEACRKFSGEKVSFQGVRCEETMRRDFWRGGSGSCNGF-------------GRKGGTML-------LDGMRSVPVVHCNQAYGLVLQLWNG----GAKLVYSGDTRPCDRLVKAGVGADLLIHEATFDDSMQKDAVSKCHCTTSEALDVGRRMRAKEIVLTHFSQRYPRVPVLDTERAQHFCVAFDGMVLNRATVGVLPAAARVLSKVL-EAKFEEEDAQE 2607
G VF+++ CP+ +++ A+ + + GA G + +IHLSP VVE Y + G HVV G GH G R + + +LN +APE FPLH +A R+ G ++ V V K + G++LLK L P + +G+D S V+ +DV + ++ E G+ G R++ T A DA + G S G+ + V + + + G P A GSQ +V P CL V G E+ FLGTG + P+K+R S I V R GG LMD G GT G L+R++G + LH VWISH HADHH GL RIIA R + + A PL+VVAPR + +FL A EK+ V C +T+ D RG S G R+ M L + SV V+HC Q+YG+V++ G KL YSGDTRPC V+A GA IHEATFD+ ++ +A++K H TT EA+ G A +LTHFSQRYP++PV+D CVAFD M +N A + V+P VL + E + EE A+E
Sbjct: 497 GPVFVLVDCPTPAHLGALVGAQGLARFQKGAEGGKQANVVIHLSPPAVVELPEYQQWVASLGGAKHVVAGYGHHGLGRPV----YISSMRLTAKLNCIAPEVFPLHMPAEQQAAAREAGEAAEV-VAAHVAKSAGAVDLVPGQNLLKFTLRPVAQQGLDESLVTANLDVEQLQNEVITATPEAILAARDVSGIAGPDPRLL------------TFAEDAT------RDGASAGPSGNGAEVGGNGSMNVDDSTDAWRVRGLTVDDGGRSDAGLGVPEAALRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGSQQAV-------PECLQGV----------------GREEMELVFLGTGSSQPSKYRNVSAIYVHRFAWGG-------------FLMDCGEGTYGQLKRRYGAKLGDTVVAHLHLVWISHIHADHHAGLVRIIAA--------RKVAREALNLPAQPLVVVAPRLLRRFLTAYDNV--EKMDMVFVDCAQTVG-DSNRGSVTSRTGLQPFTGIGADLDTGSRESAAMREAMSRVGLTSLVSVEVIHCPQSYGVVMETEGTEKRPGMKLAYSGDTRPCAAFVEASQGATAFIHEATFDNELEDEALAKRHSTTREAVTAGAAAGAFRTILTHFSQRYPKMPVVDESFTDRTCVAFDMMSVNVADLVVVPRLMSVLKLLFPEVEEPEEGAEE 1129
BLAST of mRNA_H-elongata_contig17692.4640.1 vs. uniprot
Match: A0A835M6R8_9MAGN (Ribonuclease Z n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835M6R8_9MAGN) HSP 1 Score: 228 bits (582), Expect = 5.740e-59 Identity = 199/701 (28.39%), Postives = 298/701 (42.51%), Query Frame = 1
Query: 715 GSVFLVLSCPSISYVQ---AVKNHEIFSGARGDNR------VLFIIHLSPEDVVEHAAYAPLLKLKGTHVVLGCGHRGRLRGAGGLQHRRVAEKSVQLNFVAPEAFPLHS--ALRDLGSYSDAHVKTLVVKHVSGRRVTIGRSLLKAVLLPSSARGIDASAVSPPIDVAAILQDIEQRVEEEGLRGERDRIVRELRECHQTKVDTVAIDAKVAPQQYQPGFSIVAPGSSSTVYPPRDLRPGYGSHVFLRSPXXXXXXXXXSQAFGAPLAKRPRVSVEGGSQASVLTAAPPRPPCLPSVCHSSRAQPPASLFSGGGLYGTEVFFLGTGCAAPTKHRGCSGILVRIPQGGLAGDGTVEGEPLRLLMDAGAGTLGHLERQFGRDGARREIRGLHCVWISHKHADHHTGLFRIIAEHHRAQADPRSTDGKRSSEQASPLIVVAPRSVLKFLEACRKFSGEKVSFQGVRCEET-------MRRDFWRGGS---GSCNGFGR----------KGGTML--------------------------LDGMRSVPVVHCNQAYGLVLQLWNG---------GAKLVYSGDTRPCDRLVKAGVGADLLIHEATFDDSMQKDAVSKCHCTTSEALDVGRRMRAKEIVLTHFSQRYPRVPVLDTERAQHFCVAFDGMVLNRATVGVLPAAARVLSKVLEAKFEEEDAQELVLP 2619
G + LV+ CP++S++Q +V++ + D+R V IIHLSP V AAY +K G + GH + L+ A + +LN++ P+ FP +L+ L +++ ++ + K G +L+K L P + G+D S++ I A++ ++ + + IV +E Q V +A + P + P S+ P + + + + ++ + + PP CL + E+ LGTG + P+K+R S I V + G LL+D G GTLG L+R+FG GA IR L CVWISH HADHHTGL RI++ S + PL+V+ PR + FL+A ++ E + Q V C ET R F G S GS G G KG M L+ + S+PVVHC AYG+V++ G KLVYSGDTRPC L++A GA +LIHEATF+D M +A+++ H TT EA+DVG I+LTHFSQRYP++PV D C+AFD M +N A + VLP + + ++ + + P
Sbjct: 371 GPIVLVVDCPTVSHLQELLSVQSLSCYYADSVDHRQHDFKCVNCIIHLSPSSVTMTAAYQNWMKRFGRAQHIMAGHEEKNTEIPILKSS--ARTAARLNYLCPQFFPASGFWSLQHLKNFAPDLIEDSIPKLCDS---ISGENLIKFHLRPYTHLGLDKSSIPASISSTAVINELLSEIPD---------IVHSAKEISQLWVG-LAESERAKPHTPESVVMTEEPWISADASVPNII-----------------------------------IDEKIRNASTEIISCPPS--CLEDITREDM----------------EIVLLGTGSSQPSKYRNVSSIYVNLFSKG------------SLLLDCGEGTLGQLKRRFGVKGADDAIRSLRCVWISHIHADHHTGLARILSLRRELL----------SGDSHEPLLVIGPRQLKSFLDAYQRL--EDLDMQFVNCSETTEAKLASFERSFELGDSSPSGSPVGTGSTLNIEKSLFAKGSPMQSYRKRPTSPVDTKILKNLKKVLAEAGLEALISIPVVHCPYAYGIVVKAAERTNRAGKTIPGWKLVYSGDTRPCPELIEASRGATVLIHEATFEDGMVDEAIARNHSTTGEAIDVGNSADVYRIILTHFSQRYPKIPVFDEAHMHKTCIAFDLMSVNVADLPVLPKVVPYFKLLFRNEMISDEVDDFLGP 979
BLAST of mRNA_H-elongata_contig17692.4640.1 vs. uniprot
Match: UPI00098E5CDE (uncharacterized protein LOC109822573 isoform X2 n=1 Tax=Asparagus officinalis TaxID=4686 RepID=UPI00098E5CDE) HSP 1 Score: 230 bits (586), Expect = 8.230e-59 Identity = 200/698 (28.65%), Postives = 295/698 (42.26%), Query Frame = 1
Query: 715 GSVFLVLSCPSISYV------QAVKNHEIFSG---ARGDNRVLFIIHLSPEDVVEHAAYAPLLKLKGTHVVLGCGHRGRLRGAGGLQHRRVAEKSVQLNFVAPEAFPL--------HSALRDLGSYSDAHVKTLVVKHVSGRRVTIGRSLLKAVLLPSSARGIDASAVSPPIDVAAILQDIEQRVEEEGLRGERDRIVRELRECHQTKVDTVAIDAKVAPQQYQPGFSIVAPGSSSTVYPPRDLRPGYGSHVFLRSPXXXXXXXXXSQAFGAPLAKRPRVSVEGGSQASVLTAAPPRPPCLPSVCHSSRAQPPASLFSGGGLYGTEVFFLGTGCAAPTKHRGCSGILVRIPQGGLAGDGTVEGEPLRLLMDAGAGTLGHLERQFGRDGARREIRGLHCVWISHKHADHHTGLFRIIAEHHRAQADPRSTDGKRSSEQASPLIVVAPRSVLKFLEACRKFSGEKVSFQGVRCEETMRRDFWRGGSGS------------------CNGFGRKGGTML--------------------LDGMRSVPVVHCNQAYGLVLQLWNG---------GAKLVYSGDTRPCDRLVKAGVGADLLIHEATFDDSMQKDAVSKCHCTTSEALDVGRRMRAKEIVLTHFSQRYPRVPVLDTERAQHFCVAFDGMVLNRATVGVLPAAA---RVLSKVLEAKFEEEDAQE 2607
G + L++ CP+ ++ Q ++ + + S G RV IIHLSP V +A Y +K G + GH + L + A S +LN++ P+ FP +S Y + L R++ +LLK L P S G+D SA+ I+ I+ ++ + E +D Q+ S +D+ P ++ + ++A + + + G + S +T PPCL ++ E+ LGTG + P+K+R S I V + G LL+D G GTLG L+R+FG +GA ++GL C+WISH HADHHTGL RI+A + D PL+V+ PRS+ +FL+A + F R D + S S F ++ G+ + L+ + SVPV+HC QA+G+VL+ G KLVYSGDTRPC L+ A A +LIHEATF+DSM+++A++K H TT EA+ VG RA IVLTHFSQRYP+VPV D C+AFD M +N A + VLP +VL + A E +D Q+
Sbjct: 334 GPIVLIVDCPTSDHMVELFSLQPLECYYVESSHHPGEGMRRVNCIIHLSPASVTRNADYQTWMKKFGGVQHIMAGHEMKNMEIPVL--KASARISSRLNYLCPQFFPAPGFWSPKNNSFFPQPNGYCEDSSPALA------NRIS-AENLLKFHLRPLSQLGLDHSAIPSMINHKEIVDELLTEIPE-------------------------IVDVSEHVSQFWAAES-------------KDVMPKKAENIIMVEEPWMNEASCSTKANFELVRCKESTCLVDGIEKSGVTQNFDIPPCLENITREDM----------------EIVLLGTGSSQPSKYRNVSSIFVNLFSKG------------SLLLDCGEGTLGQLKRRFGVEGADNAVKGLRCIWISHIHADHHTGLARILALRSQLLKDVPH----------EPLLVIGPRSLKRFLDAYARLEDLDALFLDCRHTTEASLDSFFSSSNSEHDKYQSQETTLFAQDSRMESFWKRPGSPVDIAMAEPLLIRLKSILRDAGLEALYSVPVIHCPQAFGVVLKAAERINSVRKTIPGWKLVYSGDTRPCQSLIDASADATVLIHEATFEDSMEEEAIAKNHSTTKEAIGVGSSARAYRIVLTHFSQRYPKVPVFDEAHMDRTCIAFDLMSINAADLPVLPKVLPYLKVLFRNEMAVDESDDIQD 946
BLAST of mRNA_H-elongata_contig17692.4640.1 vs. uniprot
Match: A0A662Y5Q3_9STRA (Lactamase_B domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y5Q3_9STRA) HSP 1 Score: 216 bits (551), Expect = 9.480e-59 Identity = 130/278 (46.76%), Postives = 169/278 (60.79%), Query Frame = 1
Query: 1642 VFFLGTGCAAPTKHRGCSGILVRIPQGGLAGDGTVEGEPLRLLMDAGAGTLGHLERQFGRDGARREIRGLHCVWISHKHADHHTGLFRIIAEHHRAQADPRSTDGKRSSEQASPLIVVAPRSVLKFLEACRKFSGEKVS----FQGVRCEETMRRDF-WRGGSGSCNGFGRKGGTMLLDGMRSVPVVHCNQAYGLVLQLWNGGAKLVYSGDTRPCDRLVKAGVGADLLIHEATFDDSMQKDAVSKCHCTTSEALDVGRRMRAKEIVLTHFSQRYPRVP 2460
+ LGTG AAP+K R SG+ + + G A E +L+D G GT G L RQFGR+ +R I GL C+WISH HADHH GL R++ E+ R +DGK PLIVV P+SVL ++++ G K+ FQ C E R D R S GF + + SVPV HC +YGLVL L GG KLVYSGDT+PC++LV AG+ A LL+HEATFDD+M++DA K H T +A+D+ RRM+A+++VLTHFSQRYP +P
Sbjct: 127 LIVLGTGSAAPSKLRASSGMYLELSGSGAA-------EVASMLVDCGEGTYGQLWRQFGREVTQR-IGGLRCIWISHNHADHHCGLVRVLYEYWRFHT--HHSDGKTPP----PLIVVGPQSVLSYVKSWLPEFGGKMPTSQLFQLATCSEFNRSDHPLRRQLLSDIGF-------AVTSIISVPVFHCYDSYGLVLTL-QGGKKLVYSGDTKPCNQLVVAGMNAALLVHEATFDDTMEQDARLKKHSTVGQAMDIARRMKAQQLVLTHFSQRYPALP 382
BLAST of mRNA_H-elongata_contig17692.4640.1 vs. uniprot
Match: M1CIC3_SOLTU (Ribonuclease Z n=11 Tax=Solanum TaxID=4107 RepID=M1CIC3_SOLTU) HSP 1 Score: 223 bits (569), Expect = 6.850e-58 Identity = 132/337 (39.17%), Postives = 180/337 (53.41%), Query Frame = 1
Query: 1639 EVFFLGTGCAAPTKHRGCSGILVRIPQGGLAGDGTVEGEPLRLLMDAGAGTLGHLERQFGRDGARREIRGLHCVWISHKHADHHTGLFRIIAEHHRAQADPRSTDGKRSSEQASPLIVVAPRSVLKFLEACRKFSGEKVSFQGVRCEETMRRD---FWRGGSGSCNGFGRKGGTML----LDGMRSVPVVHCNQAYGLVLQLWNG---------GAKLVYSGDTRPCDRLVKAGVGADLLIHEATFDDSMQKDAVSKCHCTTSEALDVGRRMRAKEIVLTHFSQRYPRVPVLDTERAQHFCVAFDGMVLNRATVGVLPAAARVLSKVLEAKFEEEDA 2601
E+ LGTG + P+K+R S I + + G +L+D G GTLG L+R+FG DGA ++GL C+WISH HADHH GL RI+A H S PLIVV P+ + FL+ + E++ Q + C +T F NG + ML L + SVPV+HC QAYG+VL+ + G K+VYSGDTRPC LVKA GA LLIHEATF+D M ++A++K H T EA++ G A ++LTHFSQRYP++PV D C+AFD M +N A + +LP+ L + + +A
Sbjct: 515 EIVLLGTGSSQPSKYRNVSSIFINLFLKG------------SILLDCGEGTLGQLKRRFGVDGADEAVKGLKCIWISHIHADHHAGLARILALRH----------DLLSGTPHEPLIVVGPQQLEIFLDRYQML--EELDMQFLDCRDTTESSWEAFESNDHNDANGSASRLKNMLREAGLMALNSVPVIHCPQAYGIVLKFADRTNVIGKKIPGWKIVYSGDTRPCPELVKASHGATLLIHEATFEDGMLEEAIAKNHSTMGEAVEAGDAAGAYRVILTHFSQRYPKIPVFDETYMHKACIAFDLMSVNLADLPMLPSVVPYLKLLFPDEMSINEA 827
BLAST of mRNA_H-elongata_contig17692.4640.1 vs. uniprot
Match: A0A803QWV9_CANSA (Uncharacterized protein n=3 Tax=Cannabis sativa TaxID=3483 RepID=A0A803QWV9_CANSA) HSP 1 Score: 213 bits (542), Expect = 9.290e-58 Identity = 135/397 (34.01%), Postives = 197/397 (49.62%), Query Frame = 1
Query: 1639 EVFFLGTGCAAPTKHRGCSGILVRI-PQGGLAGDGTVEGEPLRLLMDAGAGTLGHLERQFGRDGARREIRGLHCVWISHKHADHHTGLFRIIAEHHRAQADPRSTDGKRSSEQASPLIVVAPRSVLKFLEACRKFSGEKVSFQGVRCEETMR-------------------------RDFWR----------------GGSGSCNGFGRKGGTML-----------------LDGMRSVPVVHCNQAYGLVLQLWNG---------GAKLVYSGDTRPCDRLVKAGVGADLLIHEATFDDSMQKDAVSKCHCTTSEALDVGRRMRAKEIVLTHFSQRYPRVPVLDTERAQHFCVAFDGMVLNRATVGVLPAAARVLSKVLEAKF---EEEDAQELVL 2616
E+ FLGTG + P+K+R S I + + +GG LL+D G GTLG L+R++G DGA +RGL C+WISH HADHHTGL RI+A H + E P++VV PR + ++L+A ++ E ++ + C+ T + +D W+ + +K G+ + L+ + S PVVHC QA+G+VL+ G K+VYSGDTRPC+ ++A A +LIHEATF++ M ++AV+K H TT EA++VG A I+LTHFSQRYP++PV D + C+AFD M +N A + VLP L + + E +D QE +L
Sbjct: 25 EIVFLGTGSSQPSKYRNVSSIHINLFSKGG-------------LLLDCGEGTLGQLKRRYGVDGADDAVRGLRCIWISHIHADHHTGLARILALRHELLKE----------EPHEPILVVGPRQLKRYLDAYQRL--EDLNMMFLDCQHTTKESLDAFKSIIESSNDLISIGDPKSSKDIWKKPTDGQMAQKIDSTLFARGSRMQSYWQKPGSPIDNITEIKSLKKILGDAGLEALISFPVVHCPQAFGVVLKAAERTNSVGKSIPGWKVVYSGDTRPCEASIEASRDATILIHEATFEEGMVEEAVAKNHSTTEEAIEVGNAAGAYRIILTHFSQRYPKIPVFDETHMHNTCIAFDMMSVNVADLPVLPRVLPYLKMLFRNEMALEESDDVQESML 396
BLAST of mRNA_H-elongata_contig17692.4640.1 vs. uniprot
Match: A0A6G0KPR2_9STRA (Ribonuclease Z n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0KPR2_9STRA) HSP 1 Score: 216 bits (549), Expect = 1.960e-56 Identity = 133/321 (41.43%), Postives = 180/321 (56.07%), Query Frame = 1
Query: 1597 PPASLFSGGGLYGTEVFFLGTGCAAPTKHRGCSGILVRIPQGGLAGDGTVEGEPLRLLMDAGAGTLGHLERQFGRDGARREIRGLHCVWISHKHADHHTGLFRIIAEHHRAQADPRSTDGKRSSEQASPLIVVAPRSVLKFLEA-CRKFSGEKVSFQGVRCEETMRRDFWRGGSGSCNGFGRKGGTM----------LLDGMRSVPVVHCNQAYGLVLQLWNGGAKLVYSGDTRPCDRLVKAGVGADLLIHEATFDDSMQKDAVSKCHCTTSEALDVGRRMRAKEIVLTHFSQRYPRVP----VLDTERAQHFCVAFDGMV 2514
P ++ F G ++ LGTG AAP+K R SGI + + GT + +L+D G GT G L RQFG D +R I GL C+WISH HADHH GL R++ E+ Q + + + PL+VVAP+SVL ++E+ + G+ + R +C+ F + + + SV V HC +YGLVL L G KLVYSGDT+PC+ LV AG+GA+L++HEATFDDSM++DAV K H T S+ALD+ RRMRA+++VLTHFSQRYP +P V D C A+DG V
Sbjct: 339 PSSACFQGDIDTTRKLIVLGTGSAAPSKLRASSGIYMEL-------SGTNAADVESMLVDCGEGTFGQLWRQFGSDVTQR-IGGLRCIWISHNHADHHCGLVRVLYEYWYFQTH------RNNGDNPQPLVVVAPQSVLSYVESWLPRILGKTPDHELFRLA-------------TCSDFNLPRHPLRQQLLSEISYAVASILSVRVFHCYDSYGLVLTL-KSGKKLVYSGDTKPCNDLVLAGLGAELVVHEATFDDSMEEDAVKKKHSTVSQALDIARRMRARQVVLTHFSQRYPSLPPPVAVCDNSTPNVLC-AYDGFV 630
BLAST of mRNA_H-elongata_contig17692.4640.1 vs. uniprot
Match: Q56W90_ARATH (Uncharacterized protein At1g52160 (Fragment) n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q56W90_ARATH) HSP 1 Score: 207 bits (527), Expect = 3.170e-56 Identity = 132/371 (35.58%), Postives = 187/371 (50.40%), Query Frame = 1
Query: 1645 FFLGTGCAAPTKHRGCSGILVRIPQGGLAGDGTVEGEPLRLLMDAGAGTLGHLERQFGRDGARREIRGLHCVWISHKHADHHTGLFRIIAEHHRAQADPRSTDGKRSSEQASPLIVVAPRSVLKFLEACRKFSGEKVSFQGVRCEETMRRDFWRGGSGSCNGFGRKGGTMLLDG--MRSV-----------------------------------PVVHCNQAYGLVLQLWNG---------GAKLVYSGDTRPCDRLVKAGVGADLLIHEATFDDSMQKDAVSKCHCTTSEALDVGRRMRAKEIVLTHFSQRYPRVPVLDTERAQHFCVAFDGMVLNRATVGVLPAAARVLSKVLEAKF-EEEDAQELVL 2616
F LGTG + P+K+R S I + + G LL+D G GTLG L+R++G DGA +R L C+WISH HADHHTGL RI+A + +G P+IVV PR + +FL+A ++ E + + + C T + S G G++ G M+SV PVVHC QAYG+V++ G K+VYSGD+RPC V+A A +LIHEATF+D++ ++A++K H TT EA+DVG IVLTHFSQRYP++PV+D + C+AFD M +N A + VLP + + E+EDA ++ +
Sbjct: 1 FILGTGSSQPSKYRNVSAIFIDLFSRG------------SLLLDCGEGTLGQLKRRYGLDGADEAVRKLRCIWISHIHADHHTGLARILA------LRSKLLEGVTHE----PVIVVGPRPLKRFLDAYQRL--EDLDMEFLDCRSTTATSW-----ASLESGGEAEGSLFTQGSPMQSVFKRSDISMDNSSVLLCLKNLKKVLSEIGLNDLISFPVVHCPQAYGVVIKAAERVNSVGEQILGWKMVYSGDSRPCPETVEASRDATILIHEATFEDALIEEALAKNHSTTKEAIDVGSAAYVYRIVLTHFSQRYPKIPVIDESHMHNTCIAFDLMSINMADLHVLPKVLPYFKTLFRDEMVEDEDADDVAM 342 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17692.4640.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig17692.4640.1 >prot_H-elongata_contig17692.4640.1 ID=prot_H-elongata_contig17692.4640.1|Name=mRNA_H-elongata_contig17692.4640.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=839bp MLSAQSSPTLEVFGPAGIDGLVESVDDINSISKYLKCPEVSAMPLPLGEGback to top mRNA from alignment at H-elongata_contig17692:713..4457- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig17692.4640.1 ID=mRNA_H-elongata_contig17692.4640.1|Name=mRNA_H-elongata_contig17692.4640.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3745bp|location=Sequence derived from alignment at H-elongata_contig17692:713..4457- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig17692:713..4457- >mRNA_H-elongata_contig17692.4640.1 ID=mRNA_H-elongata_contig17692.4640.1|Name=mRNA_H-elongata_contig17692.4640.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=5034bp|location=Sequence derived from alignment at H-elongata_contig17692:713..4457- (Himanthalia elongata Himel1 dioecious)back to top |