prot_H-elongata_contig176857.4638.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig176857.4638.1
Unique Nameprot_H-elongata_contig176857.4638.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length91
Homology
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BLAST of mRNA_H-elongata_contig176857.4638.1 vs. uniprot
Match: D8LJ08_ECTSI (Carotenoid oxygenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ08_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 1.430e-15
Identity = 32/47 (68.09%), Postives = 40/47 (85.11%), Query Frame = 0 
Query:   25 VPGKFLESIRADPWRGAFEPCVDHPLTEVQVEGKVPQGIEGTLFRNG 71
            VP  FL+SIR +PWRG  +PC+DHPLTE++V GKVP+ +EGTLFRNG
Sbjct:   64 VPEVFLQSIREEPWRGTLQPCIDHPLTEIEVTGKVPKTLEGTLFRNG 110
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BLAST of mRNA_H-elongata_contig176857.4638.1 vs. uniprot
Match: A0A7S0IJC1_MICPS (Hypothetical protein n=2 Tax=Micromonas TaxID=38832 RepID=A0A7S0IJC1_MICPS)

HSP 1 Score: 52.8 bits (125), Expect = 5.970e-6
Identity = 20/46 (43.48%), Postives = 30/46 (65.22%), Query Frame = 0 
Query:   26 PGKFLESIRADPWRGAFEPCVDHPLTEVQVEGKVPQGIEGTLFRNG 71
            P   ++++ A PWRG  EPC DH L  V+VEG +P+ + G+ +R G
Sbjct:   84 PPDVVDAVDAWPWRGGLEPCGDHDLASVEVEGTIPRDLSGSFYRVG 129
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig176857.4638.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJ08_ECTSI1.430e-1568.09Carotenoid oxygenase n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A7S0IJC1_MICPS5.970e-643.48Hypothetical protein n=2 Tax=Micromonas TaxID=3883... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig176857contigH-elongata_contig176857:627..899 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig176857.4638.1mRNA_H-elongata_contig176857.4638.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig176857 624..899 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig176857.4638.1 ID=prot_H-elongata_contig176857.4638.1|Name=mRNA_H-elongata_contig176857.4638.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=91bp
MIVTPAGAGDAIATRYYWDKPHPVVPGKFLESIRADPWRGAFEPCVDHPL
TEVQVEGKVPQGIEGTLFRNGEHHEDLVSKLYVNVNLSFK*
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