mRNA_H-elongata_contig17679.4634.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig17679.4634.1
Unique NamemRNA_H-elongata_contig17679.4634.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
[Close]
BLAST of mRNA_H-elongata_contig17679.4634.1 vs. uniprot
Match: A0A6H5JZJ1_9PHAE (Bromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZJ1_9PHAE)

HSP 1 Score: 249 bits (636), Expect = 1.440e-68
Identity = 250/795 (31.45%), Postives = 319/795 (40.13%), Query Frame = 1 
Query:   88 SWRVTYLLQSGNSSNGWRKHKSPHEVLIQPDMISDNNNGSNRRHHLVVRDALSTSRVQERVPLGNGVE-SLLQAAYVVAADGNSIVRFEVGGRAVKKFAVITDSGRSAAELCQALDRRGVRVRGMEELPDVVFLRGDDQRSSDALEANIPNLSRPEVQAYIVRLLFQDSFHDFVRDLSEMFSHVQSHIPL-LPVPGSSEHTPAAGGLVPTPAETATTLIGTAMAPTLTTALTESGTPIGISTSGKENGCIAGDRVERGAGEGGENSDDTIDQIPGRKKSLPTGKEGPGNLPDRGRGSVLRGGSGRXXXXXXXXXXXXXIGGRRGRGTNTKDAVRGE----RGNYRACVTQDNQDIRGGAKESKLNETQKKRPAETECDGNPSGKLRRNAISQHSRSELGG-----ADIIAFGSTTTADGLDAFSGEQQQRPSEAAVRSISSEPVPSSTSGKAVERSQVPQLTAVGHQANTASDLSPRLGPNSKDHCPENRLTERKGSLARALKPKRP--IGGQVPTRQSKPIAGRTTEGRMGTQNAGRANSVVEPTGAKRSGTKPPRDTEKIYWKKDNATRAIAEETRAVGRSKDSGVGGQ----------------------------------------------------------------------------------RWRIGMPIPVVAP-TTSGRMAGLSATLTHIWSEVNKHPSAWPFCKAVDLAGAPDYLEVVKHPIDLSSIWERLKGAIVHYTSKEMLYDDLVLMCRNAMLYFHKDTDFHRAAKQLLQFIESTFS 2184
            SW VTYLLQS  +  GW++HKSPH   +  D +++          L V +  +TSR+QERV L  G     ++ A+V AA   +IVRF + G  V+KFA+I + GRSAAELCQALDR+GV VRGME+LPD VFLRG D+R++ ALEA IPNLSRPEVQAYIVRLLFQDSFH+FV DLSEMFSHVQ+H+P+   +  S+   PAA    P+                                SG+++ C            GG  +DD ID   G   S  +G              +L GG G               GG R  G   ++ V GE     G+                                   G P G       SQ      GG     +   A     TA G     G      ++ + R  + E                         A  ++   P                             R   +GG         + G  T                 P+G   +    P +TE +         A A    + GR+   G GGQ                                                                                  R R  MP  +++P T+SGR  GL  TL  IWSEVNKH S+W F K VD A AP YL+VVKHPIDL  I +RL G +VHYTSK ML DDL LMCRNAMLY  + T++HR A+ LL+FI+S F+
Sbjct:   36 SWGVTYLLQS--AKRGWQRHKSPHVASL--DAVNN---------CLDVTET-ATSRLQERVDLAEGATVGAIEVAFVAAAAAQNIVRFTLPGHPVRKFALIAECGRSAAELCQALDRKGVSVRGMEDLPDAVFLRGGDRRTAQALEAGIPNLSRPEVQAYIVRLLFQDSFHEFVSDLSEMFSHVQTHLPVPTSMRTSASDPPAAAAAGPS-----------------------------HGGSGEDSPC------------GGRQADD-IDH--GGNGSRDSG--------------ILSGGRGVCVGSFNGEEVVAAGGGSRAVGV--EERVHGEGASVAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRESLSGKPPGARGSRRGSQQRNDGTGGTGPGGSTDRAVDDIRTAAGSPWRGGVPLPPHAQRSKRPATEEAXXXXXXXXXXXXXXXXXXXXARGAAKGSTQRRPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRECGVGGDTSGFTQSLVGGDDTGTNSXXXXXXXXXXXKAPSGRGPASRTGPGETEPVV--------ASARGVSSSGRAAREGSGGQQVTGTCAKGGGVGQPKASRNGNSKTSARKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQRDTMPGVLMSPVTSSGRAPGLWMTLKKIWSEVNKHRSSWAFRKGVDPATAPGYLDVVKHPIDLEGIRKRLDGPVVHYTSKAMLQDDLELMCRNAMLYNDEGTEYHRVAEDLLRFIKSMFA 748
[Close]
BLAST of mRNA_H-elongata_contig17679.4634.1 vs. uniprot
Match: A0A024UBC1_9STRA (Histone acetyltransferase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UBC1_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 8.760e-16
Identity = 46/103 (44.66%), Postives = 66/103 (64.08%), Query Frame = 1 
Query: 1864 TSGRMAGLSATLTHIWSEVNKHPSAWPFCKAVDLAGAPDYLEVVKHPIDLSSIWERLKGAIVHYTSKEMLYDDLVLMCRNAMLYFHKDTDFHRAAKQLLQFIE 2172
            TS   + L   L  +W   + H SAWPF + VD+    DYL+ VKHPIDLS+I +++   +  Y +K    DDLVLMC N+MLY   DT++++AAK LL+F++
Sbjct:  457 TSRDSSTLKQQLQSMWKSFSNHRSAWPFHEPVDVTVVTDYLDFVKHPIDLSTIQKKIDENL--YATKAAFKDDLVLMCDNSMLYNAPDTNYYKAAKDLLEFVK 557
[Close]
BLAST of mRNA_H-elongata_contig17679.4634.1 vs. uniprot
Match: A0A397EEJ9_9STRA (Bromo domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397EEJ9_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 2.600e-15
Identity = 38/89 (42.70%), Postives = 59/89 (66.29%), Query Frame = 1 
Query: 1906 IWSEVNKHPSAWPFCKAVDLAGAPDYLEVVKHPIDLSSIWERLKGAIVHYTSKEMLYDDLVLMCRNAMLYFHKDTDFHRAAKQLLQFIE 2172
            +W   + H SAWPF + VD+    DYLE+++ PIDLS+I +++      Y +K    DDLVLMC N++ Y   DT++++AAK LL+F++
Sbjct:    1 MWKSFSNHRSAWPFHEPVDVTVVTDYLEIIQCPIDLSAIQKKIDENA--YATKAAFKDDLVLMCENSIAYNSPDTNYYKAAKDLLEFVK 87
[Close]
BLAST of mRNA_H-elongata_contig17679.4634.1 vs. uniprot
Match: A0A6G0XR84_9STRA (Histone acetyltransferase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XR84_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 1.810e-14
Identity = 42/103 (40.78%), Postives = 65/103 (63.11%), Query Frame = 1 
Query: 1864 TSGRMAGLSATLTHIWSEVNKHPSAWPFCKAVDLAGAPDYLEVVKHPIDLSSIWERLKGAIVHYTSKEMLYDDLVLMCRNAMLYFHKDTDFHRAAKQLLQFIE 2172
            TS   + L   L  +W   + H SAWPF + VD++   DYL+ VKHPIDLS+I ++++     Y +K    DDL+LMC N + Y   +T++++AAK LL+F++
Sbjct:  450 TSRDSSTLKQQLQILWKSFSNHRSAWPFHEPVDVSVVTDYLDFVKHPIDLSTIQKKIEDN--QYPTKAAFKDDLILMCENCLSYNSSETNYYKAAKDLLEFVK 550
[Close]
BLAST of mRNA_H-elongata_contig17679.4634.1 vs. uniprot
Match: A0A067CY31_SAPPC (Histone acetyltransferase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CY31_SAPPC)

HSP 1 Score: 87.0 bits (214), Expect = 3.690e-14
Identity = 44/95 (46.32%), Postives = 61/95 (64.21%), Query Frame = 1 
Query: 1885 LSATLTHIWSEVNKHPSAWPFCKAVDLAGAPDYLEVVKHPIDLSSIWERLKGAIVHYTSKEMLYDDLVLMCRNAMLYFHKDTDFHRAAKQLLQFI 2169
            L A L  +W  ++ H SAWPF + VD     DYLE+VK PIDL++I +R++     Y +K     DLVLMC N MLY   DT++++AAK LL+F+
Sbjct:  411 LKAQLQTLWKTLSNHRSAWPFHEPVDTRLVTDYLEIVKTPIDLTAIAKRIEENA--YANKAAFKADLVLMCDNCMLYNSSDTNYYKAAKDLLEFV 503
[Close]
BLAST of mRNA_H-elongata_contig17679.4634.1 vs. uniprot
Match: W4G526_9STRA (Histone acetyltransferase n=10 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G526_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 1.780e-13
Identity = 41/103 (39.81%), Postives = 64/103 (62.14%), Query Frame = 1 
Query: 1864 TSGRMAGLSATLTHIWSEVNKHPSAWPFCKAVDLAGAPDYLEVVKHPIDLSSIWERLKGAIVHYTSKEMLYDDLVLMCRNAMLYFHKDTDFHRAAKQLLQFIE 2172
            T+   + L   L  +W   + H SAWPF + VD+    DYLE+++ PIDLS+I +++      Y +K    DDLVLMC N++ Y   DT++++AAK LL+F++
Sbjct:  455 TNRDSSSLKQQLQSMWKSFSNHRSAWPFHEPVDVTVVTDYLEIIQCPIDLSAIQKKIDENA--YATKAAFKDDLVLMCENSIAYNSPDTNYYKAAKDLLEFVK 555
[Close]
BLAST of mRNA_H-elongata_contig17679.4634.1 vs. uniprot
Match: A0A485LR22_9STRA (Histone acetyltransferase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LR22_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 3.080e-13
Identity = 43/103 (41.75%), Postives = 63/103 (61.17%), Query Frame = 1 
Query: 1864 TSGRMAGLSATLTHIWSEVNKHPSAWPFCKAVDLAGAPDYLEVVKHPIDLSSIWERLKGAIVHYTSKEMLYDDLVLMCRNAMLYFHKDTDFHRAAKQLLQFIE 2172
            TS   + L   L  +W  ++ H SAWPF + VD+    DYL+ VK PIDLS+I +++      Y +K    DDL+LMC N + Y   DT++++AAK LL+FI+
Sbjct:  461 TSRDSSTLKQQLQTLWKSLSNHRSAWPFHEPVDVNAVTDYLDYVKTPIDLSAIQKKVDEN--QYATKLAFKDDLILMCENCISYNAPDTNYYKAAKDLLEFIK 561
[Close]
BLAST of mRNA_H-elongata_contig17679.4634.1 vs. uniprot
Match: A0A1V9ZLF8_9STRA (Histone acetyltransferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZLF8_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 1.080e-12
Identity = 40/95 (42.11%), Postives = 60/95 (63.16%), Query Frame = 1 
Query: 1885 LSATLTHIWSEVNKHPSAWPFCKAVDLAGAPDYLEVVKHPIDLSSIWERLKGAIVHYTSKEMLYDDLVLMCRNAMLYFHKDTDFHRAAKQLLQFI 2169
            L A L  +W  ++ H SAWPF + VD     DYL++VK P+DL+SI +R+      Y +K     DL+LMC N MLY   +T++++AAK LL+++
Sbjct:  412 LKAQLQALWKSLSNHRSAWPFHEPVDTKLVTDYLDIVKTPVDLTSIHKRIDEN--GYANKAAFKADLMLMCDNCMLYNSSETNYYKAAKDLLEYV 504
[Close]
BLAST of mRNA_H-elongata_contig17679.4634.1 vs. uniprot
Match: A0A418AUD5_9STRA (Histone acetyltransferase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AUD5_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 7.510e-12
Identity = 40/93 (43.01%), Postives = 57/93 (61.29%), Query Frame = 1 
Query: 1864 TSGRMAGLSATLTHIWSEVNKHPSAWPFCKAVDLAGAPDYLEVVKHPIDLSSIWERLKGAIVHYTSKEMLYDDLVLMCRNAMLYFHKDTDFHR 2142
            TS   + L   L  +W   + H SAWPF + VD+    DYL+ VKHPIDLS+I +++   +  Y +K    DDLVLMC N+MLY   DT++++
Sbjct:  302 TSRDSSTLKQQLQSMWKSFSNHRSAWPFHEPVDVTVVTDYLDFVKHPIDLSTIQKKIDENL--YATKAAFKDDLVLMCDNSMLYNAPDTNYYK 392
[Close]
BLAST of mRNA_H-elongata_contig17679.4634.1 vs. uniprot
Match: A0A7S2US18_9STRA (Histone acetyltransferase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2US18_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 1.190e-11
Identity = 48/147 (32.65%), Postives = 73/147 (49.66%), Query Frame = 1 
Query: 1741 KKDNATRAIAEETRAVGRSKDSGVGGQRWRIGMPIPVVAPTTSGRMAGLSATLTHIWSEVNKHPSAWPFCKAVDLAGAPDYLEVVKHPIDLSSIWERLKGAIVHYTSKEMLYDDLVLMCRNAMLYFHKDTDFHRAAKQLLQFIESTF 2181
            K   A R I +  R +G ++        W +      +  + + R   L   L  IW +V  H S+W F + VD+    DYL ++KHPIDL ++ ERL     HY S+  L  D+ LM  NAM Y   +T +++AA +L  +I+  F
Sbjct:  242 KSGEAGREIVDLARVLGLAEAG------WDLDKLTADLQASRAERDKNLQQALLAIWRKVKDHKSSWCFREPVDVEKVSDYLSIIKHPIDLRTMKERLDSG-THYRSRGQLKADMDLMVDNAMQYNDANTTYYKAASELKPYIKVQF 381
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17679.4634.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZJ1_9PHAE1.440e-6831.45Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A024UBC1_9STRA8.760e-1644.66Histone acetyltransferase n=1 Tax=Aphanomyces inva... [more]
A0A397EEJ9_9STRA2.600e-1542.70Bromo domain-containing protein n=1 Tax=Aphanomyce... [more]
A0A6G0XR84_9STRA1.810e-1440.78Histone acetyltransferase n=1 Tax=Aphanomyces eute... [more]
A0A067CY31_SAPPC3.690e-1446.32Histone acetyltransferase n=2 Tax=Saprolegnia TaxI... [more]
W4G526_9STRA1.780e-1339.81Histone acetyltransferase n=10 Tax=Aphanomyces ast... [more]
A0A485LR22_9STRA3.080e-1341.75Histone acetyltransferase n=1 Tax=Aphanomyces stel... [more]
A0A1V9ZLF8_9STRA1.080e-1242.11Histone acetyltransferase n=1 Tax=Achlya hypogyna ... [more]
A0A418AUD5_9STRA7.510e-1243.01Histone acetyltransferase n=1 Tax=Aphanomyces inva... [more]
A0A7S2US18_9STRA1.190e-1132.65Histone acetyltransferase n=1 Tax=Fibrocapsa japon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17679contigH-elongata_contig17679:2055..7296 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score140.6
Seed ortholog evalue2.9e-30
Seed eggNOG ortholog2880.D7FQF0
KEGG koko:K06062
KEGG Pathwayko04330,ko04919,ko05166,ko05203,map04330,map04919,map05166,map05203
EggNOG free text desc.histone acetyltransferase activity
EggNOG OGsCOG5076@1,KOG1472@2759
EC2.3.1.48
COG Functional cat.BK
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03021,ko03036
Hectar predicted targeting categoryother localisation
Exons9
Model size2190
Cds size2190
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930023.0448701-CDS-H-elongata_contig17679:2054..23151622930023.0448701-CDS-H-elongata_contig17679:2054..2315Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17679 2055..2315 +
1691679250.1102502-CDS-H-elongata_contig17679:2054..23151691679250.1102502-CDS-H-elongata_contig17679:2054..2315Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17679 2055..2315 +
1622930023.058255-CDS-H-elongata_contig17679:2566..26491622930023.058255-CDS-H-elongata_contig17679:2566..2649Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17679 2567..2649 +
1691679250.1307476-CDS-H-elongata_contig17679:2566..26491691679250.1307476-CDS-H-elongata_contig17679:2566..2649Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17679 2567..2649 +
1622930023.077731-CDS-H-elongata_contig17679:2822..29171622930023.077731-CDS-H-elongata_contig17679:2822..2917Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17679 2823..2917 +
1691679250.149096-CDS-H-elongata_contig17679:2822..29171691679250.149096-CDS-H-elongata_contig17679:2822..2917Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17679 2823..2917 +
1622930023.0928404-CDS-H-elongata_contig17679:3516..36491622930023.0928404-CDS-H-elongata_contig17679:3516..3649Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17679 3517..3649 +
1691679250.1605973-CDS-H-elongata_contig17679:3516..36491691679250.1605973-CDS-H-elongata_contig17679:3516..3649Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17679 3517..3649 +
1622930023.1039507-CDS-H-elongata_contig17679:3902..41231622930023.1039507-CDS-H-elongata_contig17679:3902..4123Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17679 3903..4123 +
1691679250.176285-CDS-H-elongata_contig17679:3902..41231691679250.176285-CDS-H-elongata_contig17679:3902..4123Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17679 3903..4123 +
1622930023.1181986-CDS-H-elongata_contig17679:4228..53841622930023.1181986-CDS-H-elongata_contig17679:4228..5384Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17679 4229..5384 +
1691679250.189042-CDS-H-elongata_contig17679:4228..53841691679250.189042-CDS-H-elongata_contig17679:4228..5384Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17679 4229..5384 +
1622930023.1307747-CDS-H-elongata_contig17679:5797..58561622930023.1307747-CDS-H-elongata_contig17679:5797..5856Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17679 5798..5856 +
1691679250.199123-CDS-H-elongata_contig17679:5797..58561691679250.199123-CDS-H-elongata_contig17679:5797..5856Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17679 5798..5856 +
1622930023.1469126-CDS-H-elongata_contig17679:6206..63391622930023.1469126-CDS-H-elongata_contig17679:6206..6339Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17679 6207..6339 +
1691679250.215538-CDS-H-elongata_contig17679:6206..63391691679250.215538-CDS-H-elongata_contig17679:6206..6339Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17679 6207..6339 +
1622930023.161851-CDS-H-elongata_contig17679:7247..72961622930023.161851-CDS-H-elongata_contig17679:7247..7296Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17679 7248..7296 +
1691679250.2267363-CDS-H-elongata_contig17679:7247..72961691679250.2267363-CDS-H-elongata_contig17679:7247..7296Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17679 7248..7296 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17679.4634.1prot_H-elongata_contig17679.4634.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig17679 2055..7296 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig17679.4634.1

>prot_H-elongata_contig17679.4634.1 ID=prot_H-elongata_contig17679.4634.1|Name=mRNA_H-elongata_contig17679.4634.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=730bp
MDSPAQHQAHTLQEHHQRHQQQQQERHAPSWRVTYLLQSGNSSNGWRKHK
SPHEVLIQPDMISDNNNGSNRRHHLVVRDALSTSRVQERVPLGNGVESLL
QAAYVVAADGNSIVRFEVGGRAVKKFAVITDSGRSAAELCQALDRRGVRV
RGMEELPDVVFLRGDDQRSSDALEANIPNLSRPEVQAYIVRLLFQDSFHD
FVRDLSEMFSHVQSHIPLLPVPGSSEHTPAAGGLVPTPAETATTLIGTAM
APTLTTALTESGTPIGISTSGKENGCIAGDRVERGAGEGGENSDDTIDQI
PGRKKSLPTGKEGPGNLPDRGRGSVLRGGSGRRGRGRLGGGRGGGIGGRR
GRGTNTKDAVRGERGNYRACVTQDNQDIRGGAKESKLNETQKKRPAETEC
DGNPSGKLRRNAISQHSRSELGGADIIAFGSTTTADGLDAFSGEQQQRPS
EAAVRSISSEPVPSSTSGKAVERSQVPQLTAVGHQANTASDLSPRLGPNS
KDHCPENRLTERKGSLARALKPKRPIGGQVPTRQSKPIAGRTTEGRMGTQ
NAGRANSVVEPTGAKRSGTKPPRDTEKIYWKKDNATRAIAEETRAVGRSK
DSGVGGQRWRIGMPIPVVAPTTSGRMAGLSATLTHIWSEVNKHPSAWPFC
KAVDLAGAPDYLEVVKHPIDLSSIWERLKGAIVHYTSKEMLYDDLVLMCR
NAMLYFHKDTDFHRAAKQLLQFIESTFSP*
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mRNA from alignment at H-elongata_contig17679:2055..7296+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig17679.4634.1 ID=mRNA_H-elongata_contig17679.4634.1|Name=mRNA_H-elongata_contig17679.4634.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5242bp|location=Sequence derived from alignment at H-elongata_contig17679:2055..7296+ (Himanthalia elongata Himel1 dioecious)
ATGGACTCACCAGCTCAGCACCAAGCGCACACACTTCAAGAGCACCATCA
GCGGCACCAGCAGCAGCAACAAGAGCGCCACGCGCCTTCTTGGAGGGTGA
CGTATCTCCTCCAGTCGGGAAATAGCTCAAATGGTTGGCGAAAGCACAAA
TCTCCCCACGAAGTTTTGATACAACCAGATATGATATCGGACAACAACAA
CGGCTCCAACCGACGCCACCACTTAGTTGTGAGGGACGCTCTTAGCACCT
CCCGGGTCCAGGTGTGGTCGCGACTGATCGCGCTCATCACACTAATAACA
AATTATGCGGCTTGTTCGACGCGGAGGCGACTGAAATTTTGATGGATTGT
TCATGGATTGATTGCGCCAGAAGTGAAGTGTACGAATTAGAGCAGTCTGT
AATTTCGAATACAATGGCCCTGAAATTTGTGAGCATTCTCAATCGAAGTG
CCGCCTGAAAACGGGTTTTCTAATTCTAAGGCGCGTTCCAACGGCGATTT
CATGCGTATCAGGAACGTGTGCCTCTGGGAAATGGGGTGGAGTCCCTTCT
TCAGGCAGCATACGTTGTCGCAGCGGATGGGAATAGCATAGTGAGGTAAA
ACGCCCAACGAAACCCCGTTTACCGTTAGCGGCGGGGCACAAGATTGCGT
TTCCTTCACACGACTGTTTGTAGAGAACGGTGGCGCTAGGTTCAGTTAGA
ACAGGAGTAGGTCCTCCGCCTACTCCAACATACACTTGATTCCCGGACGA
TTATGCTGCACCAATCAGATTTGAGGTGGGCGGACGAGCTGTGAAGAAGT
TCGCGGTCATCACGGACAGCGGGCGCAGCGCGGCAGAGCTTTGTCAAGCA
CTAGATCGTCGAGGTGAAGGCGCTAACCTCCTGAGCCGCAGCACGTTGAG
TGGTAGTCGGACCGTTCGTGACGTCACTCTGACTCGCTACTTGCTTTGTT
TGCTTAACCCCGGCCTCATGGTATCTGATAAACGAAGATGATATTAACGT
TTTTATTACATCTTCGACATATTAAGTATGACTGGAAGGAAAAAGAAAGT
GTCGAAAGGCAACGAAAACCGCGCAGTAAAAAAATGTTCTCCAGACGAAG
CAACCTGTACACGCCGAAAATTTCAAGAGCGTCCAAAATACAAAGGTTAG
ACGTTTATTTGTGGTTACACGGGTAAGATGCACACACAAACAGTCAATGC
CTTGTGCTGTGTTTCGCCATAGAGATTCTTGCTGCCCAAGACTCTGCATC
TGGAAATTATCCACCCACTCCGAAGTTTGATGTTTCAAACCACGGTGCTG
AGAGGAGGATGACGGGTATAGTCGGAGCTGCAAGCGATGGAAGGGGTATA
TTATACACACAACACCCCTACGAAGTGCATCTAAGTTTATGATGCGCGAT
ATGTCCCGCCCACCCCATATCTTGTTTGGGGCAACACCGTCACTCCATGC
GGTCTCTTGCAGGTGTGAGGGTGCGAGGAATGGAAGAACTTCCCGATGTA
GTTTTTCTCCGGGGAGACGACCAGCGAAGCTCCGACGCTCTCGAGGCCAA
CATCCCGAACCTCTCCAGACCCGAGGTGCAGGCATACATTGTCAGGTAAG
CCATCAAGCCCGCGGCGAAGCCGTTTCGTTAAAGACTCGTGACTTTAAGG
CTTGAATCCGGGCCATGGTGCAGGCAAGGTATATAATTTATCGACAATAC
GCTACGATTTGTGTACGTCCTGCGGCTAATAGTATTTATTCCTGACAGCA
GCAACAATCCCACCATACAATCTCCGTGACAGCCCTTCCTGCTGTACTAC
TATTCCCCCGTCTGCACATGCTCACGTTCGCCGTCGAGGGGGTGAAAGGC
TTCTTTTCCAGGATTCCTTTCATGATTTTGTGCGAGACTTGAGCGAGATG
TTTTCACACGTTCAGAGTCACATCCCTTTGTTACCGGTTCCGGGATCGAG
CGAGCATACTCCGGCCGCCGGGGGCCTCGTTCCAACTCCTGCGGAAACGG
CAACCACACTCATCGGGACGGCGATGGCTCCCACGCTGACGACCGCGCTG
ACAGAATCGGGTACCCCTAGTGATTTTTCTGTGACTGCCGTAGCTCTAAA
TCACCCCGAGGATAGATGTCATCAAAGCATAGAAACCGGTGGAGTCAGCA
GGCGCACTTACGATTCATGTACAGTAGGGATCAGCACGAGTGGCAAAGAG
AATGGCTGCATTGCAGGAGACAGAGTGGAACGTGGTGCCGGTGAAGGCGG
AGAAAACAGTGACGACACTATCGACCAGATTCCCGGAAGAAAGAAATCGT
TGCCAACAGGAAAGGAAGGGCCAGGGAACTTACCGGATCGAGGACGTGGG
TCAGTTTTGCGCGGAGGCAGCGGTAGGCGTGGACGAGGAAGACTAGGTGG
AGGGCGAGGCGGAGGAATTGGAGGGAGAAGAGGAAGAGGCACTAATACAA
AGGACGCCGTCAGAGGAGAGCGAGGAAATTATCGTGCTTGTGTGACTCAA
GACAATCAAGATATCCGAGGCGGTGCGAAAGAAAGTAAGCTAAATGAAAC
GCAAAAAAAGCGACCTGCTGAAACAGAATGTGATGGGAACCCCTCTGGGA
AGTTGAGGCGGAACGCGATATCACAGCACTCGCGGTCGGAACTCGGGGGT
GCAGATATCATTGCATTTGGTTCCACGACGACTGCAGATGGTCTCGACGC
CTTTTCTGGAGAGCAACAACAGCGGCCTTCTGAAGCCGCAGTGCGATCGA
TATCATCTGAACCCGTACCGTCGTCGACATCGGGAAAGGCCGTTGAACGT
TCACAAGTACCGCAGTTAACGGCGGTCGGGCATCAGGCGAACACCGCAAG
CGACTTATCGCCTCGTTTGGGGCCCAATTCAAAAGATCACTGCCCCGAGA
ACCGGTTGACTGAGCGGAAAGGAAGCCTCGCCCGCGCGTTGAAACCGAAG
CGTCCCATTGGAGGCCAAGTCCCTACCCGACAAAGCAAACCTATCGCTGG
CCGAACTACGGAAGGGAGAATGGGTACGCAAAATGCTGGCAGGGCAAATA
GTGTCGTAGAACCAACCGGAGCTAAGAGGAGCGGGACAAAACCGCCACGA
GATACCGAGAAAATATATTGGAAGAAAGACAACGCTACAAGGGCCATCGC
TGAGGAAACGAGGGCTGTAGGGAGATCGAAGGACAGTGGCGTTGGTGGGC
AGAGGTGGAGGATCGGCATGCCCATTCCCGTAGTGGCTCCGACGACCAGC
GGACGGATGGCAGGGCTTTCGGCGACACTAACCCACATTTGGTCTGAGGT
CAACAAGCACCCTTCCGCTTGGCCCTTTTGGTGCGCTCTATTTTCTTCCG
TACCTTCCTGGTTCGGTATGACTAAGAGAAGGGAGGGAAAAAGTCGGGGT
GTCTTGCGCGCGATGCTGTTGGCCCTCCTACCCCCCATCTGCCTCTGTAA
AGTTGCGAACCGAGGACTGTGTATTCAAAGTTAACTATCTTCCGCCGTTT
TTGTATCGCATTCAGCAGCTTGCGGCTTTCTCGTCCCTGGAATGTAAGAT
TTGTTTCTTGAGGATATAAGCGATCAAGCACTTTATTCTTTTGAAGCGTA
CGGGGATGTCGTTCGACCGGATATTATCCCCCACGTTTGTGAAGCACTAC
TACGCAGCGACAGGCAAACAATCGCCACTGCATTTGTCGTGTTGTCGTCT
CTTTGATAACGATGCCCCTCATTGATGGTTTTGGTACCCACAGCAAGGCA
GTCGATCTCGCCGGGGCTCCCGACTACCTGGAGGTCGTGAAGCACCCCAT
CGGTGAGCCTCTACCCGTAATATTCCAAATACGTCCGACGGGTGATAATC
CATCGTTCGCGCGGTCAAGCCGACGGCAAGAATAGTTAGCATGTTAGTTG
AAGCAATGTAAACTTTGAATCATTTTTTTTAATTGGTGTTAGCCTCGTTC
TGGCTTGGCATTTCGTTTTCCACGGGTTGTTAACGAGTAGTACATGATGT
TTCCGGCACAAGAGGATGTACGACAGTCTCCAGGTTCGACATTTTGCCGC
TCTCGGTTGAACCATCTCTAAATACCTCACCCAACATAATAACTTCGTCA
GCGCTCGTCCGTAAGAACACCATACGCGACGTTCCACGCTGTACTCCCAA
AGATCTCAGCAGCATTTGGGAGCGTCTCAAAGGAGCGATCGTGCACTACA
CCAGCAAGGAGATGCTGTACGATGACCTGGTTCTCATGTGCAGAAACGCT
ATGTTGTACTTCCACAAGGACACGGATTTCCACAGGTGCCTACTCGCTGG
ATAAAGGCACAAAGTATCAATGTTCCCAACGTTCCCCCCGCAAGATACGA
CGTCTATTGTAATGTATACCTTCAAATTGTTGTGTTATGTTTTTGCATCG
TACTTGGAGATAAGCCACCCTCCCACGCTGCCGCACGTAATTCGAAGGTC
ACGCGAGTTTCGTGGACGCAAAATGTTGCCCAACATAATTATCTGTGGAG
TAAGAACGTCCTAACCTTCTTAGCACCATGAAAGGTGTAGTCCAGGCGAC
CAACTATCGTCAAGTTCGAATATGGACATTTTAAATACACTTAAGAACAA
AATCGTGCTTTATTAGACACTCTCGATTTTCATTAATATATTTCGATAAA
AAATCTCCTCTCTCCCTCGCTGCATCCGAAGACCACGTGAATATTGTTGA
CAAAACCTACTTTCATATTTAAAGACCAGTTCGATAACTTTGTGCACACG
TTTTTGATCGTCATCACTCCTGCGATGTATCCAAACCGACGTAACTGGCC
ATGAAAATACTGCCGTCTAAACGTTTCCGAGAGCAGTACGTTTTTTTTGT
AGCATTCTATTTATTTTCACTTTCTGTCGATGGGTTATCTATCCAAACTA
CTATTACGAGGTTATCCAAACTACTATTACGAGGTTATCTATCCAAACTA
CTATTACGAGGTTACCCCCGCAAAGAGACGCTTCCCATCCCACATGAAGT
TCTAATGGTTTAACCCATCTCTCCCTGGTTCATTCCTATACTATGGTGCC
TAATTGTTTTTAACTGTATGATCCAAATTCCGTGAATCGTTGCGCTAATA
TCCCCCCCCCCCAACTTTTGTATTTACGGCTTTCATTCTTGCGTTCTCTT
TTACGCTCTATTTGATTTTATTCTCGGGACGTTGCCGCTGAAGGGCGGCC
AAACAACTACTACAGTTCATCGAGTCGACATTTTCTCCCTAG
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Coding sequence (CDS) from alignment at H-elongata_contig17679:2055..7296+

>mRNA_H-elongata_contig17679.4634.1 ID=mRNA_H-elongata_contig17679.4634.1|Name=mRNA_H-elongata_contig17679.4634.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4380bp|location=Sequence derived from alignment at H-elongata_contig17679:2055..7296+ (Himanthalia elongata Himel1 dioecious)
ATGGACTCACCAGCTCAGCACCAAGCGCACACACTTCAAGAGCACCATCA
GCGGCACCAGCAGCAGCAACAAGAGCGCCACGCGCCTTCTTGGAGGGTGA
CGTATCTCCTCCAGTCGGGAAATAGCTCAAATGGTTGGCGAAAGCACAAA
TCTCCCCACGAAGTTTTGATACAACCAGATATGATATCGGACAACAACAA
CGGCTCCAACCGACGCCACCACTTAGTTGTGAGGGACGCTCTTAGCACCT
CCCGGGTCCAGATGGACTCACCAGCTCAGCACCAAGCGCACACACTTCAA
GAGCACCATCAGCGGCACCAGCAGCAGCAACAAGAGCGCCACGCGCCTTC
TTGGAGGGTGACGTATCTCCTCCAGTCGGGAAATAGCTCAAATGGTTGGC
GAAAGCACAAATCTCCCCACGAAGTTTTGATACAACCAGATATGATATCG
GACAACAACAACGGCTCCAACCGACGCCACCACTTAGTTGTGAGGGACGC
TCTTAGCACCTCCCGGGTCCAGGAACGTGTGCCTCTGGGAAATGGGGTGG
AGTCCCTTCTTCAGGCAGCATACGTTGTCGCAGCGGATGGGAATAGCATA
GTGAGGAACGTGTGCCTCTGGGAAATGGGGTGGAGTCCCTTCTTCAGGCA
GCATACGTTGTCGCAGCGGATGGGAATAGCATAGTGAGATTTGAGGTGGG
CGGACGAGCTGTGAAGAAGTTCGCGGTCATCACGGACAGCGGGCGCAGCG
CGGCAGAGCTTTGTCAAGCACTAGATCGTCGAGATTTGAGGTGGGCGGAC
GAGCTGTGAAGAAGTTCGCGGTCATCACGGACAGCGGGCGCAGCGCGGCA
GAGCTTTGTCAAGCACTAGATCGTCGAGGTGTGAGGGTGCGAGGAATGGA
AGAACTTCCCGATGTAGTTTTTCTCCGGGGAGACGACCAGCGAAGCTCCG
ACGCTCTCGAGGCCAACATCCCGAACCTCTCCAGACCCGAGGTGCAGGCA
TACATTGTCAGGTGTGAGGGTGCGAGGAATGGAAGAACTTCCCGATGTAG
TTTTTCTCCGGGGAGACGACCAGCGAAGCTCCGACGCTCTCGAGGCCAAC
ATCCCGAACCTCTCCAGACCCGAGGTGCAGGCATACATTGTCAGGCTTCT
TTTCCAGGATTCCTTTCATGATTTTGTGCGAGACTTGAGCGAGATGTTTT
CACACGTTCAGAGTCACATCCCTTTGTTACCGGTTCCGGGATCGAGCGAG
CATACTCCGGCCGCCGGGGGCCTCGTTCCAACTCCTGCGGAAACGGCAAC
CACACTCATCGGGACGGCGATGGCTCCCACGCTGACGACCGCGCTGACAG
AATCGGGTACCCCTAGCTTCTTTTCCAGGATTCCTTTCATGATTTTGTGC
GAGACTTGAGCGAGATGTTTTCACACGTTCAGAGTCACATCCCTTTGTTA
CCGGTTCCGGGATCGAGCGAGCATACTCCGGCCGCCGGGGGCCTCGTTCC
AACTCCTGCGGAAACGGCAACCACACTCATCGGGACGGCGATGGCTCCCA
CGCTGACGACCGCGCTGACAGAATCGGGTACCCCTATAGGGATCAGCACG
AGTGGCAAAGAGAATGGCTGCATTGCAGGAGACAGAGTGGAACGTGGTGC
CGGTGAAGGCGGAGAAAACAGTGACGACACTATCGACCAGATTCCCGGAA
GAAAGAAATCGTTGCCAACAGGAAAGGAAGGGCCAGGGAACTTACCGGAT
CGAGGACGTGGGTCAGTTTTGCGCGGAGGCAGCGGTAGGCGTGGACGAGG
AAGACTAGGTGGAGGGCGAGGCGGAGGAATTGGAGGGAGAAGAGGAAGAG
GCACTAATACAAAGGACGCCGTCAGAGGAGAGCGAGGAAATTATCGTGCT
TGTGTGACTCAAGACAATCAAGATATCCGAGGCGGTGCGAAAGAAAGTAA
GCTAAATGAAACGCAAAAAAAGCGACCTGCTGAAACAGAATGTGATGGGA
ACCCCTCTGGGAAGTTGAGGCGGAACGCGATATCACAGCACTCGCGGTCG
GAACTCGGGGGTGCAGATATCATTGCATTTGGTTCCACGACGACTGCAGA
TGGTCTCGACGCCTTTTCTGGAGAGCAACAACAGCGGCCTTCTGAAGCCG
CAGTGCGATCGATATCATCTGAACCCGTACCGTCGTCGACATCGGGAAAG
GCCGTTGAACGTTCACAAGTACCGCAGTTAACGGCGGTCGGGCATCAGGC
GAACACCGCAAGCGACTTATCGCCTCGTTTGGGGCCCAATTCAAAAGATC
ACTGCCCCGAGAACCGGTTGACTGAGCGGAAAGGAAGCCTCGCCCGCGCG
TTGAAACCGAAGCGTCCCATTGGAGGCCAAGTCCCTACCCGACAAAGCAA
ACCTATCGCTGGCCGAACTACGGAAGGGAGAATGGGTACGCAAAATGCTG
GCAGGGCAAATAGTGTCGTAGAACCAACCGGAGCTAAGAGGAGCGGGACA
AAACCGCCACGAGATACCGAGAAAATATATTGGAAGAAAGACAACGCTAC
AAGGGCCATCGCTGAGGAAACGAGGGCTGTAGGGAGATCGAAGGACAGTG
GCGTTGGTGGGCAGAGGTGGAGGATCGGCATGCCCATTCCCGTAGTGGCT
CCGACGACCAGCGGACGGATGGCAGGGCTTTCGGCGACACTAACCCACAT
TTGGTCTGAGGTCAACAAGCACCCTTCCGCTTGGCCCTTTTGTAGGGATC
AGCACGAGTGGCAAAGAGAATGGCTGCATTGCAGGAGACAGAGTGGAACG
TGGTGCCGGTGAAGGCGGAGAAAACAGTGACGACACTATCGACCAGATTC
CCGGAAGAAAGAAATCGTTGCCAACAGGAAAGGAAGGGCCAGGGAACTTA
CCGGATCGAGGACGTGGGTCAGTTTTGCGCGGAGGCAGCGGTAGGCGTGG
ACGAGGAAGACTAGGTGGAGGGCGAGGCGGAGGAATTGGAGGGAGAAGAG
GAAGAGGCACTAATACAAAGGACGCCGTCAGAGGAGAGCGAGGAAATTAT
CGTGCTTGTGTGACTCAAGACAATCAAGATATCCGAGGCGGTGCGAAAGA
AAGTAAGCTAAATGAAACGCAAAAAAAGCGACCTGCTGAAACAGAATGTG
ATGGGAACCCCTCTGGGAAGTTGAGGCGGAACGCGATATCACAGCACTCG
CGGTCGGAACTCGGGGGTGCAGATATCATTGCATTTGGTTCCACGACGAC
TGCAGATGGTCTCGACGCCTTTTCTGGAGAGCAACAACAGCGGCCTTCTG
AAGCCGCAGTGCGATCGATATCATCTGAACCCGTACCGTCGTCGACATCG
GGAAAGGCCGTTGAACGTTCACAAGTACCGCAGTTAACGGCGGTCGGGCA
TCAGGCGAACACCGCAAGCGACTTATCGCCTCGTTTGGGGCCCAATTCAA
AAGATCACTGCCCCGAGAACCGGTTGACTGAGCGGAAAGGAAGCCTCGCC
CGCGCGTTGAAACCGAAGCGTCCCATTGGAGGCCAAGTCCCTACCCGACA
AAGCAAACCTATCGCTGGCCGAACTACGGAAGGGAGAATGGGTACGCAAA
ATGCTGGCAGGGCAAATAGTGTCGTAGAACCAACCGGAGCTAAGAGGAGC
GGGACAAAACCGCCACGAGATACCGAGAAAATATATTGGAAGAAAGACAA
CGCTACAAGGGCCATCGCTGAGGAAACGAGGGCTGTAGGGAGATCGAAGG
ACAGTGGCGTTGGTGGGCAGAGGTGGAGGATCGGCATGCCCATTCCCGTA
GTGGCTCCGACGACCAGCGGACGGATGGCAGGGCTTTCGGCGACACTAAC
CCACATTTGGTCTGAGGTCAACAAGCACCCTTCCGCTTGGCCCTTTTGCA
AGGCAGTCGATCTCGCCGGGGCTCCCGACTACCTGGAGGTCGTGAAGCAC
CCCATCGCAAGGCAGTCGATCTCGCCGGGGCTCCCGACTACCTGGAGGTC
GTGAAGCACCCCATCGATCTCAGCAGCATTTGGGAGCGTCTCAAAGGAGC
GATCGTGCACTACACCAGCAAGGAGATGCTGTACGATGACCTGGTTCTCA
TGTGCAGAAACGCTATGTTGTACTTCCACAAGGACACGGATTTCCACAGA
TCTCAGCAGCATTTGGGAGCGTCTCAAAGGAGCGATCGTGCACTACACCA
GCAAGGAGATGCTGTACGATGACCTGGTTCTCATGTGCAGAAACGCTATG
TTGTACTTCCACAAGGACACGGATTTCCACAGGGCGGCCAAACAACTACT
ACAGTTCATCGAGTCGACATTTTCTCCCTAGGGCGGCCAAACAACTACTA
CAGTTCATCGAGTCGACATTTTCTCCCTAG
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