mRNA_H-elongata_contig176614.4624.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig176614.4624.1 vs. uniprot
Match: D7FJH8_ECTSI (Fimbrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJH8_ECTSI) HSP 1 Score: 111 bits (277), Expect = 1.530e-26 Identity = 55/72 (76.39%), Postives = 62/72 (86.11%), Query Frame = 1
Query: 4 ADGKLNLPSGGEPLSLYKSTENLNVALTAAEAAGLQVVNIGASDIMNGRPASILGLSWQLIRVHLLAQINLK 219
AD +N P+ EPLSLYK+ ENLNVAL AAE GLQVVNIGA+DI+ GRPASILGL+WQLIR+HLLAQINLK
Sbjct: 188 ADTNVNTPTNDEPLSLYKANENLNVALEAAEKHGLQVVNIGATDIIQGRPASILGLTWQLIRIHLLAQINLK 259
BLAST of mRNA_H-elongata_contig176614.4624.1 vs. uniprot
Match: A0A5M3ME32_CONPW (Fimbrin n=1 Tax=Coniophora puteana (strain RWD-64-598) TaxID=741705 RepID=A0A5M3ME32_CONPW) HSP 1 Score: 82.4 bits (202), Expect = 2.060e-16 Identity = 41/80 (51.25%), Postives = 59/80 (73.75%), Query Frame = 1
Query: 16 LNLPSGGEPLSLYKSTENLNVALTAAEAAGLQVVNIGASDIMNGRPASILGLSWQLIRVHLLAQINLKVKAKVKMHQACE 255
LNLPSG +PL+ ++ TEN N+ +T+A+A G VVNIG+SDI GR ILGL WQ+IR LLAQ+++K+ + +++ CE
Sbjct: 172 LNLPSGKKPLNNFQMTENNNIVITSAKAIGCSVVNIGSSDIAEGREHLILGLIWQIIRKGLLAQVDIKLHPE--LYRLCE 249
BLAST of mRNA_H-elongata_contig176614.4624.1 vs. uniprot
Match: A0A1Q3E9V7_LENED (Ca2+-binding actin-bundling protein n=3 Tax=Omphalotaceae TaxID=72117 RepID=A0A1Q3E9V7_LENED) HSP 1 Score: 80.1 bits (196), Expect = 1.340e-15 Identity = 40/80 (50.00%), Postives = 58/80 (72.50%), Query Frame = 1
Query: 16 LNLPSGGEPLSLYKSTENLNVALTAAEAAGLQVVNIGASDIMNGRPASILGLSWQLIRVHLLAQINLKVKAKVKMHQACE 255
LN PSG +PL+ ++ TEN N+ +T+A+A G VVNIG+SDI GR ILGL WQ+IR LLAQ+++K+ + +++ CE
Sbjct: 172 LNKPSGRKPLNAFQITENNNIVITSAKAIGCSVVNIGSSDIAEGREHLILGLIWQIIRRGLLAQVDIKLHPE--LYRLCE 249
BLAST of mRNA_H-elongata_contig176614.4624.1 vs. uniprot
Match: A0A369K4E6_HYPMA (Fimbrin n=2 Tax=Lyophyllaceae TaxID=930979 RepID=A0A369K4E6_HYPMA) HSP 1 Score: 77.8 bits (190), Expect = 8.670e-15 Identity = 38/80 (47.50%), Postives = 57/80 (71.25%), Query Frame = 1
Query: 16 LNLPSGGEPLSLYKSTENLNVALTAAEAAGLQVVNIGASDIMNGRPASILGLSWQLIRVHLLAQINLKVKAKVKMHQACE 255
LN P+ +PL+ ++ TEN N+ +T+A+A G VVNIG+SDI GR ILGL WQ+IR LLAQ+++K+ + +++ CE
Sbjct: 171 LNKPTARKPLNAFQMTENNNIVITSAKAIGCSVVNIGSSDIAEGREHLILGLIWQIIRRGLLAQVDIKIHPE--LYRLCE 248
BLAST of mRNA_H-elongata_contig176614.4624.1 vs. uniprot
Match: A0A1J8PIL1_9AGAM (Uncharacterized protein n=1 Tax=Rhizopogon vesiculosus TaxID=180088 RepID=A0A1J8PIL1_9AGAM) HSP 1 Score: 77.4 bits (189), Expect = 1.210e-14 Identity = 39/80 (48.75%), Postives = 56/80 (70.00%), Query Frame = 1
Query: 16 LNLPSGGEPLSLYKSTENLNVALTAAEAAGLQVVNIGASDIMNGRPASILGLSWQLIRVHLLAQINLKVKAKVKMHQACE 255
LN PS +PL+ ++ TEN N+ +T+A+ G VVNIG+SDI GR ILGL WQ+IR LLAQ+N+K+ + +++ CE
Sbjct: 214 LNKPSTRKPLNAFQMTENNNIVITSAKGIGCSVVNIGSSDIAEGREHLILGLIWQVIRRGLLAQVNIKLHPE--LYRLCE 291
BLAST of mRNA_H-elongata_contig176614.4624.1 vs. uniprot
Match: A0A0D7B7S7_9AGAR (Ca2+-binding actin-bundling protein n=1 Tax=Cylindrobasidium torrendii FP15055 ss-10 TaxID=1314674 RepID=A0A0D7B7S7_9AGAR) HSP 1 Score: 77.0 bits (188), Expect = 1.620e-14 Identity = 37/80 (46.25%), Postives = 58/80 (72.50%), Query Frame = 1
Query: 16 LNLPSGGEPLSLYKSTENLNVALTAAEAAGLQVVNIGASDIMNGRPASILGLSWQLIRVHLLAQINLKVKAKVKMHQACE 255
LN P+G +PL+ ++ TEN N+ +T+A+A G VVNIG++D+ GR ILGL WQ+IR LLAQ+++K+ + +++ CE
Sbjct: 172 LNKPNGRKPLNAFQMTENNNIVITSAKAIGCSVVNIGSTDLAEGREHLILGLIWQVIRRGLLAQVDIKLHPE--LYRLCE 249
BLAST of mRNA_H-elongata_contig176614.4624.1 vs. uniprot
Match: A0A5C2SVC7_9APHY (Fimbrin n=2 Tax=Lentinus tigrinus TaxID=5365 RepID=A0A5C2SVC7_9APHY) HSP 1 Score: 76.6 bits (187), Expect = 2.210e-14 Identity = 39/80 (48.75%), Postives = 56/80 (70.00%), Query Frame = 1
Query: 16 LNLPSGGEPLSLYKSTENLNVALTAAEAAGLQVVNIGASDIMNGRPASILGLSWQLIRVHLLAQINLKVKAKVKMHQACE 255
LN P+ +PL+ ++ TEN N+ +T+A+A G VVNIG SDI GR ILGL WQ+IR LLAQI++K+ + +++ CE
Sbjct: 173 LNKPTAKKPLNAFQMTENNNIVITSAKAIGCSVVNIGPSDIAEGREHLILGLIWQIIRRGLLAQIDIKLHPE--LYRLCE 250
BLAST of mRNA_H-elongata_contig176614.4624.1 vs. uniprot
Match: A0A4R0R5L4_9APHY (Uncharacterized protein n=2 Tax=Steccherinaceae TaxID=81059 RepID=A0A4R0R5L4_9APHY) HSP 1 Score: 76.6 bits (187), Expect = 2.210e-14 Identity = 36/80 (45.00%), Postives = 58/80 (72.50%), Query Frame = 1
Query: 16 LNLPSGGEPLSLYKSTENLNVALTAAEAAGLQVVNIGASDIMNGRPASILGLSWQLIRVHLLAQINLKVKAKVKMHQACE 255
LN P+ +PL+ ++ TEN N+ +T+A+A G VVNIG++D++ GR ILGL WQ+IR LLAQ+++K+ + +++ CE
Sbjct: 174 LNKPTARKPLNAFQMTENNNIVITSAKAIGCSVVNIGSTDLIEGREHLILGLIWQIIRRGLLAQVDIKIHPE--LYRLCE 251
BLAST of mRNA_H-elongata_contig176614.4624.1 vs. uniprot
Match: A0A4S8M6M0_DENBC (Uncharacterized protein n=4 Tax=Agaricales TaxID=5338 RepID=A0A4S8M6M0_DENBC) HSP 1 Score: 76.6 bits (187), Expect = 2.210e-14 Identity = 39/80 (48.75%), Postives = 57/80 (71.25%), Query Frame = 1
Query: 16 LNLPSGGEPLSLYKSTENLNVALTAAEAAGLQVVNIGASDIMNGRPASILGLSWQLIRVHLLAQINLKVKAKVKMHQACE 255
LN PSG + L+ ++ TEN N+ +T+A+A G VVNIG+SDI GR ILGL WQ+IR LLAQ+++K+ + +++ CE
Sbjct: 172 LNKPSGRKALNAFQITENNNIVITSAKAIGCSVVNIGSSDIAEGREHLILGLIWQVIRRGLLAQVDIKLHPE--LYRLCE 249
BLAST of mRNA_H-elongata_contig176614.4624.1 vs. uniprot
Match: A0A0C3S6Q3_PHLGI (Uncharacterized protein n=1 Tax=Phlebiopsis gigantea 11061_1 CR5-6 TaxID=745531 RepID=A0A0C3S6Q3_PHLGI) HSP 1 Score: 76.6 bits (187), Expect = 2.210e-14 Identity = 37/80 (46.25%), Postives = 57/80 (71.25%), Query Frame = 1
Query: 16 LNLPSGGEPLSLYKSTENLNVALTAAEAAGLQVVNIGASDIMNGRPASILGLSWQLIRVHLLAQINLKVKAKVKMHQACE 255
LN P+ +PL+ ++ TEN N+ +T+A+A G VVNIG+SD+ GR ILGL WQ+IR LLAQ+++K+ + +++ CE
Sbjct: 183 LNKPNARKPLNAFQMTENNNIVITSAKAIGCSVVNIGSSDLAEGREHLILGLIWQVIRRGLLAQVDIKIHPE--LYRLCE 260 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig176614.4624.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig176614.4624.1 >prot_H-elongata_contig176614.4624.1 ID=prot_H-elongata_contig176614.4624.1|Name=mRNA_H-elongata_contig176614.4624.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=89bp TADGKLNLPSGGEPLSLYKSTENLNVALTAAEAAGLQVVNIGASDIMNGRback to top mRNA from alignment at H-elongata_contig176614:602..868+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig176614.4624.1 ID=mRNA_H-elongata_contig176614.4624.1|Name=mRNA_H-elongata_contig176614.4624.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=267bp|location=Sequence derived from alignment at H-elongata_contig176614:602..868+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig176614:602..868+ >mRNA_H-elongata_contig176614.4624.1 ID=mRNA_H-elongata_contig176614.4624.1|Name=mRNA_H-elongata_contig176614.4624.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=534bp|location=Sequence derived from alignment at H-elongata_contig176614:602..868+ (Himanthalia elongata Himel1 dioecious)back to top |