prot_H-elongata_contig17658.4622.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig17658.4622.1
Unique Nameprot_H-elongata_contig17658.4622.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length198
Homology
BLAST of mRNA_H-elongata_contig17658.4622.1 vs. uniprot
Match: D7FYM6_ECTSI (Thioredoxin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYM6_ECTSI)

HSP 1 Score: 263 bits (672), Expect = 7.010e-86
Identity = 131/198 (66.16%), Postives = 162/198 (81.82%), Query Frame = 0
Query:    1 MVLSYGVLRCYFISSPRLTTKQTWTGFSQEVEVLGLAAAMVLSKCRKIATFDELLERVLFVGKATVSSLLYFVGAAYMVSYLAIWAALSLLVQRPRFPHPREVSSLTGGEFQSMVRSST-QAPGPPVAWLVMFHADWCSASSNIQPMFGALARRFSGKNRRFALVDVVSYPDVAENLNINTGGTSKQLPTLALFVGGR 197
            +VL+YG++R Y +S+PRLT++ TWTGFSQE E++GLA A ++SK RK+ATFDE L R   +GKA V+ LL+FVG  +MV YL +W A SL+V  PRF  P EVS+L  GEFQSMVRSS+ QAPG  VAWLVMFHADWCS+S N+QPMFGALARR++ KNRRFA+VD+V++P+ AE+LNINT GTSKQLPTLALF  GR
Sbjct:   26 LVLNYGIVRWY-MSAPRLTSQATWTGFSQETEIIGLATATLVSKYRKMATFDEFLARFFVIGKAAVAVLLFFVGIPHMVWYLILWTACSLVVPYPRFVLPSEVSTLNPGEFQSMVRSSSAQAPGERVAWLVMFHADWCSSSHNLQPMFGALARRYADKNRRFAVVDIVAHPETAEDLNINTAGTSKQLPTLALFASGR 222          
BLAST of mRNA_H-elongata_contig17658.4622.1 vs. uniprot
Match: A0A6H5JZG0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZG0_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 2.020e-37
Identity = 74/124 (59.68%), Postives = 88/124 (70.97%), Query Frame = 0
Query:   31 VEVLGLAAAMVLSKCRKIATFDELLERVLFVGKATVSSLLYFVGAAYMVSYLAIWAALSLLVQRPRFPHPREVSSLTGGEFQSMVRSST-QAPGPPVAWLVMFHADWCSASSNIQPMFGALARR 153
            +EV+GLA A ++SK RK+ATFDE L R   +GKA V+ LL+FVG  +MV YL +W                EVS+L  GEFQSMVRSS+ QAPG  VAWLVMFHADWCS+S N+QPMFGALARR
Sbjct:    1 MEVIGLATATLVSKYRKMATFDEFLARFFVIGKAAVAVLLFFVGIPHMVWYLILWT---------------EVSTLNPGEFQSMVRSSSAQAPGDRVAWLVMFHADWCSSSRNLQPMFGALARR 109          
BLAST of mRNA_H-elongata_contig17658.4622.1 vs. uniprot
Match: A0A6V1S3B1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S3B1_HETAK)

HSP 1 Score: 112 bits (281), Expect = 5.550e-27
Identity = 69/201 (34.33%), Postives = 108/201 (53.73%), Query Frame = 0
Query:    1 MVLSYGVLRCYFISSPRLTTKQTWTGFSQEVEVLGLAAAMVLSKCRKIATFDELLERVLFVGKATVSSLLYFVGAAYMVSYLAIWAALSLLVQRPRFPHPREVSSLTGGEFQSMVRSSTQAPGPPVAWLVMFHADWCSASSNIQPMFGALARRFSGKNR-----RFALVDVVSYPDVAENLNINTGGTSKQLPTLALFVGG 196
            ++L Y ++R  +     L   +T  GF++EVE++ LA   ++ K  + AT D+ L++V   GK    +LL+++   +   YL I A ++L V  P       + S+  G FQ +V++      P  A LVMFH DWC   +  +P+F  +A RF G        RFA VD+V +P++A+   ++  GTSKQLPT  LF  G
Sbjct:   19 LLLIYPLVRFTYGIPDSLRDTRTMLGFTKEVEMILLAFVALIVKFARAATLDQYLDKVFLFGKMANGALLFYINRPFATGYLVI-AFVTLAVLNPPKILNLSIESMGMGTFQEVVKNCRD---PRRAALVMFHCDWCKDCTLTEPIFSRIADRFRGGGXXXGPYRFAKVDLVRFPELADEYAVDVSGTSKQLPTFILFYKG 215          
BLAST of mRNA_H-elongata_contig17658.4622.1 vs. uniprot
Match: W4H8H0_9STRA (Thioredoxin domain-containing protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H8H0_9STRA)

HSP 1 Score: 110 bits (274), Expect = 3.420e-26
Identity = 64/198 (32.32%), Postives = 98/198 (49.49%), Query Frame = 0
Query:    1 MVLSYGVLRCYFISSPRLTTKQTWTGFSQEVEVLGLAAAMVLSKCRKIATFDELLERVLFVGKATVSSLLYFVGAAYMVSYLAIWAALSLLVQRPRFPHPREVSSLTGGEFQSMVRSSTQAPGPPVAWLVMFHADWCSASSNIQPMFGALARRFSGKNRRFALVDVVSYPDVAENLNINTGGTS-KQLPTLALFVGGR 197
            ++ SYGV R    S+ +L  K+ W G ++E ++L +    +L   RK AT D ++       K ++  L Y +       Y      + L+V  P++  P + ++LTG  F   VR+ +        WLV  HADWC        MF  L+        RF  +DV +YPD+A+ LNI+   T+ KQLP+L LF GG+
Sbjct:   19 LISSYGVARITRTSA-KLAEKEEWLGLTREQQILFVLVGSILFNYRKKATVDGVIAMAFLYAKGSIGGLFYLLDPTLFACYAIAAVLIFLVVPYPKYAGPHKSTTLTGAFFNEHVRNGSSG-----TWLVYLHADWCDECLYHDAMFADLSLAHGTDAVRFGRLDVEAYPDIAKELNIDMNATTTKQLPSLVLFEGGK 210          
BLAST of mRNA_H-elongata_contig17658.4622.1 vs. uniprot
Match: A0A7S2RZA8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZA8_9STRA)

HSP 1 Score: 100 bits (249), Expect = 3.390e-22
Identity = 58/199 (29.15%), Postives = 99/199 (49.75%), Query Frame = 0
Query:    4 SYGVLRCYF----ISSPRLTTKQTWT-GFSQEVEVLGLAAAMVLSKCRKIATFDELLERVLFVGKATVSSLLYFVGAAYMVSYLAIWAALSLLVQRPRFPHPREVSSLTGGEFQSMVRSSTQAPGPPVAWLVMFHADWCSASSNIQPMFGALARRFSGKNRRFALVDVVSYPDVAENLNINTGGTSKQLPTLALFVGGR 197
            +Y  LR Y+    +S   +    +W    ++E E+    A ++  K RK +T +++ E+V    K T   LL+F     MV Y        +L++ P+F    E   L    F + VR+  +       WLV+FHADWC   + ++P+   L+ R S + R++  +D+V +P++ +  NI+    +KQLPT+  F  GR
Sbjct:   34 AYLPLRMYWLDSEVSQAFMQEPGSWVESLTREQEIACFGAFVLFLKTRKTSTLEQVCEKVFLFSKLTTLVLLFFASKTTMVGYFLAVTVAFVLLRPPKFFGDEEFEYLHASSFDAQVRNP-KGDMRKTTWLVVFHADWCEKCTTLEPLLAKLSLRHSDEGRKWGKIDLVHFPELGKEFNIDMTPYTKQLPTVIEFFKGR 231          
BLAST of mRNA_H-elongata_contig17658.4622.1 vs. uniprot
Match: A0A673A5L4_9TELE (Thioredoxin related transmembrane protein 2 n=3 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A673A5L4_9TELE)

HSP 1 Score: 83.6 bits (205), Expect = 9.430e-16
Identity = 45/169 (26.63%), Postives = 87/169 (51.48%), Query Frame = 0
Query:   29 QEVEVLGLAAAMVLSKCRKIATFDELLERVLFVGKATVSSLLYFVGAAYMVSYLAIWAALSLLVQRPRFPHPREVSSLTGGEFQSMVRSSTQAPGPPVAWLVMFHADWCSASSNIQPMFGALARRFSGKNRRFALVDVVSYPDVAENLNINTGGTSKQLPTLALFVGGR 197
            +E+E+L   +A+V+ K R+  T D+ +  +    K     L + +     + YLA+  A  +  + P +  P  ++  +       ++  ++     + W+V F+A+W S   +  P+F  L+ +++    RFA VD+  Y D+++   ++T   +KQLPTLAL+ GGR
Sbjct:   64 RELEILMFLSAIVMMKNRRAITLDQHIGNLFLFSKVANVILFFRLDVRLGILYLALCVAFVMTCKPPIYMGPEYITYFSDKTIDEELQRDSR-----ITWIVEFYANWSSDCQSFAPVFADLSLKYNCAGLRFAKVDIGRYGDISQRYGVSTSPLAKQLPTLALYQGGR 227          
BLAST of mRNA_H-elongata_contig17658.4622.1 vs. uniprot
Match: A0A4U5UE82_COLLU (Thioredoxin-related transmembrane protein 2-B n=7 Tax=Eupercaria TaxID=1489922 RepID=A0A4U5UE82_COLLU)

HSP 1 Score: 74.7 bits (182), Expect = 1.570e-12
Identity = 44/169 (26.04%), Postives = 85/169 (50.30%), Query Frame = 0
Query:   29 QEVEVLGLAAAMVLSKCRKIATFDELLERVLFVGKATVSSLLYFVGAAYMVSYLAIWAALSLLVQRPRFPHPREVSSLTGGEFQSMVRSSTQAPGPPVAWLVMFHADWCSASSNIQPMFGALARRFSGKNRRFALVDVVSYPDVAENLNINTGGTSKQLPTLALFVGGR 197
            +EVE+L   +A+V+ K R+  T ++ +  +    K     L + +     + YL++  A  +  + P +  P  +   +       ++  ++     V W+V F+A+W S   +  P+F  L+ +++    RF  VD+  Y +V++   ++T   +KQLPT+ALF GGR
Sbjct:   64 REVEILMFLSAIVMMKNRRAITLEQHIGNLFLFSKVANVILFFRLDIRLGILYLSLCVAFVMTCKPPLYMGPEYIKYFSDKTIDEELQRDSR-----VTWIVEFYANWSSDCQSFAPVFADLSLKYNCAGLRFGKVDIGRYGEVSQT--VSTSPLAKQLPTVALFQGGR 225          
BLAST of mRNA_H-elongata_contig17658.4622.1 vs. uniprot
Match: UPI00103FA335 (thioredoxin-related transmembrane protein 2 homolog n=1 Tax=Ostrinia furnacalis TaxID=93504 RepID=UPI00103FA335)

HSP 1 Score: 72.0 bits (175), Expect = 9.930e-12
Identity = 52/171 (30.41%), Postives = 75/171 (43.86%), Query Frame = 0
Query:   28 SQEVEVLGLAAAMVLSKCRKIA--TFDELLERVLFVGKATVSSLLYFVGAAYMVSYLAIWAALSLLVQRPRFPHPREVSSLTGGEFQSMVRSSTQAPGPPVAWLVMFHADWCSASSNIQPMFGALARRFSGKNRRFALVDVVSYPDVAENLNINTGGTSKQLPTLALFVGG 196
            S+E E+L     +V+ + RK    T    L       K     L  +    Y + Y A+    SLL+  P +  P  +    G   QS+     +  G    W+V  +A W  A  N  P+F  L+  +S  N +F  VD+  YPD A    +  G TS+QLPT+ LFV G
Sbjct:   48 SRETEILFFLIIVVMLRTRKAGSVTMVNYLSSSFVYTKIANLILWLYADIRYGLPYGALIILTSLLLPEPTYMGPEHIIYFRG--TQSLDEELKRNKG--TTWVVCLYAAWHPACVNFAPVFAELSASYSLDNFKFGKVDIGRYPDAAAKYRVQDGPTSRQLPTVLLFVDG 214          
BLAST of mRNA_H-elongata_contig17658.4622.1 vs. uniprot
Match: A0A7R9WE99_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WE99_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 1.590e-11
Identity = 47/132 (35.61%), Postives = 66/132 (50.00%), Query Frame = 0
Query:   76 AYMVSYLAIWAALSLLVQRPR---FPHPREVSSLTGGEFQSMVRSST--QAPGPPVAW-----LVMFHADWCSASSNIQPMFGALARRFSGKNRRFALVDVVSYPDVAENLNINTGGTSKQLPTLALFVGGR 197
            A   + LA +AA+SLLV  PR   +     V+ L    F + VR +T    PG   A      +V+FH  W        P+   L++    + RRF  VD+  YP+V   L I+T  +SKQLPT+ LF GG+
Sbjct:   22 AAFAALLAAYAAISLLVPPPRCYGYVEGGRVTPLNPRSFAAEVRKATTDSQPGRKTASCLTDDVVLFHVPWSDDCRYFYPILADLSKEHLKEERRFWSVDLNVYPEVGAELRIDTSTSSKQLPTVVLFHGGK 153          
BLAST of mRNA_H-elongata_contig17658.4622.1 vs. uniprot
Match: UPI001864A035 (thioredoxin-related transmembrane protein 2-B-like n=1 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI001864A035)

HSP 1 Score: 68.6 bits (166), Expect = 2.540e-10
Identity = 40/169 (23.67%), Postives = 79/169 (46.75%), Query Frame = 0
Query:   29 QEVEVLGLAAAMVLSKCRKIATFDELLERVLFVGKATVSSLLYFVGAAYMVSYLAIWAALSLLVQRPRFPHPREVSSLTGGEFQSMVRSSTQAPGPPVAWLVMFHADWCSASSNIQPMFGALARRFSGKNRRFALVDVVSYPDVAENLNINTGGTSKQLPTLALFVGGR 197
            +EVE+L   +A+V+ K R+  T ++ +  +    K   + L + +     + YL +     +  + P +  P  +   +    +  +   ++     V W+V F A+W     +   ++  L+ +++    +F  VDV  Y +V     ++T   +KQLPTLALF GG+
Sbjct:   64 REVEILMFLSAIVMMKNRRAITVEQHVGNIFLFSKVANAILFFRLDIRMGLLYLTMCIVFLMTCKPPLYMGPEYIKYFSDKTIEEELERDSR-----VTWIVEFFANWSPECQSFASVYADLSLKYNCAGLKFGKVDVGRYGEVTNKYKVSTSPLTKQLPTLALFQGGK 227          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17658.4622.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D7FYM6_ECTSI7.010e-8666.16Thioredoxin-like protein n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JZG0_9PHAE2.020e-3759.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6V1S3B1_HETAK5.550e-2734.33Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
W4H8H0_9STRA3.420e-2632.32Thioredoxin domain-containing protein n=5 Tax=Apha... [more]
A0A7S2RZA8_9STRA3.390e-2229.15Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A673A5L4_9TELE9.430e-1626.63Thioredoxin related transmembrane protein 2 n=3 Ta... [more]
A0A4U5UE82_COLLU1.570e-1226.04Thioredoxin-related transmembrane protein 2-B n=7 ... [more]
UPI00103FA3359.930e-1230.41thioredoxin-related transmembrane protein 2 homolo... [more]
A0A7R9WE99_9STRA1.590e-1135.61Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
UPI001864A0352.540e-1023.67thioredoxin-related transmembrane protein 2-B-like... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 93..197
e-value: 9.9E-16
score: 59.8
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..68
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 69..92
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 93..197
NoneNo IPR availableTMHMMTMhelixcoord: 66..88
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 104..196
e-value: 1.5E-7
score: 31.4
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 97..196

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17658contigH-elongata_contig17658:1921..4071 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17658.4622.1mRNA_H-elongata_contig17658.4622.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig17658 1639..4072 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig17658.4622.1 ID=prot_H-elongata_contig17658.4622.1|Name=mRNA_H-elongata_contig17658.4622.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=198bp
MVLSYGVLRCYFISSPRLTTKQTWTGFSQEVEVLGLAAAMVLSKCRKIAT
FDELLERVLFVGKATVSSLLYFVGAAYMVSYLAIWAALSLLVQRPRFPHP
REVSSLTGGEFQSMVRSSTQAPGPPVAWLVMFHADWCSASSNIQPMFGAL
ARRFSGKNRRFALVDVVSYPDVAENLNINTGGTSKQLPTLALFVGGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR036249Thioredoxin-like_sf