prot_H-elongata_contig10559.461.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig10559.461.1
Unique Nameprot_H-elongata_contig10559.461.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length348
Homology
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BLAST of mRNA_H-elongata_contig10559.461.1 vs. uniprot
Match: D8LT60_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LT60_ECTSI)

HSP 1 Score: 209 bits (533), Expect = 6.740e-58
Identity = 115/220 (52.27%), Postives = 136/220 (61.82%), Query Frame = 0 
Query:    1 IVFPGHRYTAPKRGPNGHQSMGGFTLQELLDANYKRSSGNIFALGKPNFLEPNMNAAYDFVPVGLARRVIRR--DTPMTATQWWCESSAAWAVVAGAFRTSEVNANIQPDSRWIPVWGRLHRYDGEGKEGGGRVR-----------GSDGILALPPFNKYGPEWWESTLRIIVYDAAAETGAYGLERALDVPEDERGEAEKKLMIGAALFFEAVLRGSGG 207
            I+FPG RY A     +     GGFTL E LDAN+ R+SGNIF +G+PNF EP+M+ AYDFVPVGLARRV+RR    P+    W C SS AWA VA  FR      +    S    VWG +       + GG R               DG L+LPP +KYGPEWWESTLRIIVYDAAAET AYGLERAL VP++ERG  E+ +M+ A L+ EAVLR   G
Sbjct:  548 IIFPGERYAAAGSTHDKASGGGGFTLLEFLDANFDRASGNIFMVGRPNFPEPSMDTAYDFVPVGLARRVVRRHNSAPLPTALWVCHSSKAWATVAAEFRVVATVGDTY-GSNSNGVWGLIATLVDRRRFGGSRRATAASTTENNDGSEDGSLSLPPRDKYGPEWWESTLRIIVYDAAAETAAYGLERALAVPDEERGPFERDMMVTAVLYLEAVLRSYNG 766
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10559.461.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LT60_ECTSI6.740e-5852.27Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10559contigH-elongata_contig10559:4192..5680 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10559.461.1mRNA_H-elongata_contig10559.461.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig10559 4192..5680 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig10559.461.1 ID=prot_H-elongata_contig10559.461.1|Name=mRNA_H-elongata_contig10559.461.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=348bp
IVFPGHRYTAPKRGPNGHQSMGGFTLQELLDANYKRSSGNIFALGKPNFL
EPNMNAAYDFVPVGLARRVIRRDTPMTATQWWCESSAAWAVVAGAFRTSE
VNANIQPDSRWIPVWGRLHRYDGEGKEGGGRVRGSDGILALPPFNKYGPE
WWESTLRIIVYDAAAETGAYGLERALDVPEDERGEAEKKLMIGAALFFEA
VLRGSGGRHSVSVLKNAGLAYLNLVKSKREGIKHHRDILRVPHDPLCAAH
LLPWNTETDKSCEAPQVLQGECTGNDEHHTTRFVTTREPIYSVDTNKRNP
SNVVGDWRGAASARFMQLWKEFLKHDDAPLDSQYDAVRTIYGHLLDRL
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