prot_H-elongata_contig176352.4611.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig176352.4611.1
Unique Nameprot_H-elongata_contig176352.4611.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length61
Homology
BLAST of mRNA_H-elongata_contig176352.4611.1 vs. uniprot
Match: D7FY89_ECTSI (Novel protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY89_ECTSI)

HSP 1 Score: 102 bits (253), Expect = 8.290e-24
Identity = 48/59 (81.36%), Postives = 52/59 (88.14%), Query Frame = 0
Query:    1 MLGASSCLPAVEYFCLYAGTAILFDFFLQVTAFVALLAMDAKRQKAGKFDWFCCFTSKK 59
            +LG+ + LPAVEYFCLYA TAILFDFFLQ+TAFVALL MDA RQKAGK DW CCFTSKK
Sbjct:  408 LLGSLTSLPAVEYFCLYAATAILFDFFLQMTAFVALLTMDANRQKAGKIDWCCCFTSKK 466          
BLAST of mRNA_H-elongata_contig176352.4611.1 vs. uniprot
Match: D7FY98_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY98_ECTSI)

HSP 1 Score: 101 bits (252), Expect = 1.130e-23
Identity = 50/59 (84.75%), Postives = 52/59 (88.14%), Query Frame = 0
Query:    1 MLGASSCLPAVEYFCLYAGTAILFDFFLQVTAFVALLAMDAKRQKAGKFDWFCCFTSKK 59
            MLG+ S LPAVEYFCLYAGTAILFDFFLQ+TAFVALL MDA RQKAGK D  CCFTSKK
Sbjct:  385 MLGSMSSLPAVEYFCLYAGTAILFDFFLQMTAFVALLTMDANRQKAGKIDSCCCFTSKK 443          
BLAST of mRNA_H-elongata_contig176352.4611.1 vs. uniprot
Match: D8LCK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCK4_ECTSI)

HSP 1 Score: 98.6 bits (244), Expect = 1.360e-22
Identity = 48/61 (78.69%), Postives = 51/61 (83.61%), Query Frame = 0
Query:    1 MLGASSCLPAVEYFCLYAGTAILFDFFLQVTAFVALLAMDAKRQKAGKFDWFCCFTSKKLP 61
            +LGA S LPAV+YFCLYA TAILFDFFLQ+TAFVALL MDA RQKAGK D  CCFTS K P
Sbjct:  288 LLGAQSSLPAVQYFCLYAATAILFDFFLQMTAFVALLTMDANRQKAGKIDCCCCFTSPKHP 348          
BLAST of mRNA_H-elongata_contig176352.4611.1 vs. uniprot
Match: A0A6H5JGQ4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGQ4_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 1.720e-19
Identity = 48/63 (76.19%), Postives = 49/63 (77.78%), Query Frame = 0
Query:    1 MLGASSCLPAVEYFCLYAGTAILFDFFLQVT----AFVALLAMDAKRQKAGKFDWFCCFTSKK 59
            MLG  S LPAVEYFCLYAGTAILFDFFL  +    AFVALL MDA RQKAGK D  CCFTSKK
Sbjct:   65 MLGRVSSLPAVEYFCLYAGTAILFDFFLPESKNNRAFVALLTMDANRQKAGKIDSCCCFTSKK 127          
BLAST of mRNA_H-elongata_contig176352.4611.1 vs. uniprot
Match: D7FY95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY95_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 1.140e-18
Identity = 44/59 (74.58%), Postives = 48/59 (81.36%), Query Frame = 0
Query:    1 MLGASSCLPAVEYFCLYAGTAILFDFFLQVTAFVALLAMDAKRQKAGKFDWFCCFTSKK 59
            +LG+ + LPAVEYFCLYA TAILFDFFLQ+TAFVALL MDA RQKAGK D     TSKK
Sbjct:  436 LLGSMTSLPAVEYFCLYAATAILFDFFLQMTAFVALLTMDANRQKAGKIDCCXXLTSKK 494          
BLAST of mRNA_H-elongata_contig176352.4611.1 vs. uniprot
Match: A0A835YJJ3_9STRA (Patched family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJJ3_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 1.680e-16
Identity = 36/54 (66.67%), Postives = 44/54 (81.48%), Query Frame = 0
Query:    1 MLGASSCLPAVEYFCLYAGTAILFDFFLQVTAFVALLAMDAKRQKAGKFDWFCC 54
            MLGA+S LPA+EYFC+YAG A+LFDF LQV +F+ALLA D  RQ+A K+D  CC
Sbjct:  430 MLGANSTLPAIEYFCIYAGVAVLFDFLLQVPSFIALLAYDTDRQRARKYDLLCC 483          
BLAST of mRNA_H-elongata_contig176352.4611.1 vs. uniprot
Match: A0A1Z5KZL9_ORNMO (SSD domain-containing protein (Fragment) n=1 Tax=Ornithodoros moubata TaxID=6938 RepID=A0A1Z5KZL9_ORNMO)

HSP 1 Score: 68.2 bits (165), Expect = 8.630e-14
Identity = 33/54 (61.11%), Postives = 41/54 (75.93%), Query Frame = 0
Query:    8 LPAVEYFCLYAGTAILFDFFLQVTAFVALLAMDAKRQKAGKFDWFCCFTSKKLP 61
            +PAV+ F LYAG A+L DF LQVT FVALL +DAKRQ+AG+ D  CC+ + K P
Sbjct:    1 MPAVKTFALYAGVALLIDFLLQVTCFVALLTLDAKRQEAGRLD-VCCWATTKSP 53          
BLAST of mRNA_H-elongata_contig176352.4611.1 vs. uniprot
Match: A0A8C4RH22_ERPCA (NPC1 like intracellular cholesterol transporter 1 n=2 Tax=Polypteridae TaxID=8289 RepID=A0A8C4RH22_ERPCA)

HSP 1 Score: 73.2 bits (178), Expect = 1.180e-13
Identity = 35/57 (61.40%), Postives = 45/57 (78.95%), Query Frame = 0
Query:    2 LGASSCLPAVEYFCLYAGTAILFDFFLQVTAFVALLAMDAKRQKAGKFDWFCCFTSK 58
            LGA S +PAV+ F LYA  A+LFDF LQ+TAFVALL++DAKRQ+A ++D  CC  +K
Sbjct:  771 LGALSTMPAVKTFALYAALAVLFDFLLQMTAFVALLSLDAKRQEAMRYDVVCCIRAK 827          
BLAST of mRNA_H-elongata_contig176352.4611.1 vs. uniprot
Match: A0A2H1CV51_FASHE (SSD domain-containing protein n=1 Tax=Fasciola hepatica TaxID=6192 RepID=A0A2H1CV51_FASHE)

HSP 1 Score: 72.4 bits (176), Expect = 2.190e-13
Identity = 34/59 (57.63%), Postives = 44/59 (74.58%), Query Frame = 0
Query:    3 GASSCLPAVEYFCLYAGTAILFDFFLQVTAFVALLAMDAKRQKAGKFDWFCCFTSKKLP 61
            G+ + +PAV  F LYAG AILF+F LQ+ AFVALLA+DA+R+ A +FD FCCF  +  P
Sbjct:  133 GSLTSMPAVRAFALYAGVAILFNFLLQIFAFVALLALDARRRAANRFDVFCCFGLRPTP 191          
BLAST of mRNA_H-elongata_contig176352.4611.1 vs. uniprot
Match: A0A821TLU1_9NEOP (Hypothetical protein n=15 Tax=Pieris TaxID=7115 RepID=A0A821TLU1_9NEOP)

HSP 1 Score: 72.4 bits (176), Expect = 2.200e-13
Identity = 35/58 (60.34%), Postives = 42/58 (72.41%), Query Frame = 0
Query:    2 LGASSCLPAVEYFCLYAGTAILFDFFLQVTAFVALLAMDAKRQKAGKFDWFCCFTSKK 59
            LGA S +PAV  F LYAG A+L DF LQVT FVALLA+D +RQ A ++D FCC +  K
Sbjct:  727 LGALSDMPAVRAFALYAGAALLVDFLLQVTCFVALLAIDTRRQNANRYDIFCCLSGTK 784          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig176352.4611.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FY89_ECTSI8.290e-2481.36Novel protein n=1 Tax=Ectocarpus siliculosus TaxID... [more]
D7FY98_ECTSI1.130e-2384.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LCK4_ECTSI1.360e-2278.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JGQ4_9PHAE1.720e-1976.19Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7FY95_ECTSI1.140e-1874.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YJJ3_9STRA1.680e-1666.67Patched family-domain-containing protein n=1 Tax=T... [more]
A0A1Z5KZL9_ORNMO8.630e-1461.11SSD domain-containing protein (Fragment) n=1 Tax=O... [more]
A0A8C4RH22_ERPCA1.180e-1361.40NPC1 like intracellular cholesterol transporter 1 ... [more]
A0A2H1CV51_FASHE2.190e-1357.63SSD domain-containing protein n=1 Tax=Fasciola hep... [more]
A0A821TLU1_9NEOP2.200e-1360.34Hypothetical protein n=15 Tax=Pieris TaxID=7115 Re... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000731Sterol-sensing domainPFAMPF12349Sterol-sensingcoord: 1..56
e-value: 1.3E-17
score: 64.1
IPR000731Sterol-sensing domainPROSITEPS50156SSDcoord: 1..39
score: 14.512
NoneNo IPR availablePANTHERPTHR45727FAMILY NOT NAMEDcoord: 2..58
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 16..39
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 40..61
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..15
NoneNo IPR availableTMHMMTMhelixcoord: 15..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig176352contigH-elongata_contig176352:190..1299 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig176352.4611.1mRNA_H-elongata_contig176352.4611.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig176352 190..1299 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig176352.4611.1 ID=prot_H-elongata_contig176352.4611.1|Name=mRNA_H-elongata_contig176352.4611.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=61bp
MLGASSCLPAVEYFCLYAGTAILFDFFLQVTAFVALLAMDAKRQKAGKFD
WFCCFTSKKLP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000731SSD