prot_H-elongata_contig176293.4607.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig176293.4607.1
Unique Nameprot_H-elongata_contig176293.4607.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length121
Homology
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BLAST of mRNA_H-elongata_contig176293.4607.1 vs. uniprot
Match: D8LM26_ECTSI (PX domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM26_ECTSI)

HSP 1 Score: 115 bits (287), Expect = 2.470e-27
Identity = 57/107 (53.27%), Postives = 77/107 (71.96%), Query Frame = 0 
Query:   16 MSAIPYCDHHGWRWDTGKGPSPCVGETLSFWLSVFGCLCSV-LAGNSFTVQQRASVAGSTGAKIHSAQITLSLAQAIVALTGGVLSARPTGMLCGALLLHTLGWTMA 121
            M +IPYCDHHGW W++G+GPSPC+GET SF L+    L ++ L  ++    QRA+ AGST A++H+ QITL++ QA +AL  GVL  RP GML GA LL+++ WT A
Sbjct:    1 MGSIPYCDHHGWNWESGQGPSPCMGETASFLLASSVLLYTIPLTKDTLHPFQRAAAAGSTAARVHAVQITLAIVQASIALVCGVLFVRPRGMLSGANLLYSMSWTAA 107
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig176293.4607.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LM26_ECTSI2.470e-2753.27PX domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableTMHMMTMhelixcoord: 42..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig176293contigH-elongata_contig176293:239..601 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig176293.4607.1mRNA_H-elongata_contig176293.4607.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig176293 239..602 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig176293.4607.1 ID=prot_H-elongata_contig176293.4607.1|Name=mRNA_H-elongata_contig176293.4607.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=121bp
SQPASSSLTNICATMMSAIPYCDHHGWRWDTGKGPSPCVGETLSFWLSVF
GCLCSVLAGNSFTVQQRASVAGSTGAKIHSAQITLSLAQAIVALTGGVLS
ARPTGMLCGALLLHTLGWTMA
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