prot_H-elongata_contig176230.4605.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig176230.4605.1
Unique Nameprot_H-elongata_contig176230.4605.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length53
Homology
BLAST of mRNA_H-elongata_contig176230.4605.1 vs. uniprot
Match: D8LEA9_ECTSI (FYVE-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEA9_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 1.840e-20
Identity = 39/49 (79.59%), Postives = 45/49 (91.84%), Query Frame = 0
Query:    1 QHHCRACGRLYCSACSRFRALLPRSFATRDPQRVCQPCNARVAPLQEML 49
            +HHCR CG ++C ACS+FRALLPRSF +RDPQR+CQPCNARVAPLQEML
Sbjct:  252 RHHCRLCGGIFCYACSQFRALLPRSFGSRDPQRLCQPCNARVAPLQEML 300          
BLAST of mRNA_H-elongata_contig176230.4605.1 vs. uniprot
Match: A0A835Z286_9STRA (FYVE-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z286_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 2.520e-15
Identity = 31/49 (63.27%), Postives = 42/49 (85.71%), Query Frame = 0
Query:    1 QHHCRACGRLYCSACSRFRALLPRSFATRDPQRVCQPCNARVAPLQEML 49
            +HHCR CG ++C++CS++++LLPRSF TRDPQRVC+ CNA +A LQE L
Sbjct:  110 KHHCRCCGGIFCASCSKYQSLLPRSFGTRDPQRVCKACNASLAHLQEHL 158          
BLAST of mRNA_H-elongata_contig176230.4605.1 vs. uniprot
Match: A0A150GYM9_GONPE (FYVE-type domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GYM9_GONPE)

HSP 1 Score: 68.9 bits (167), Expect = 2.570e-12
Identity = 28/51 (54.90%), Postives = 36/51 (70.59%), Query Frame = 0
Query:    1 QHHCRACGRLYCSACSRFRALLPRSFATRDPQRVCQPCNARVAPLQEMLVG 51
            +HHCR CGR+YCSAC   +ALLP  +  R PQRVC+ C   +AP Q++L G
Sbjct:  249 RHHCRLCGRIYCSACCHKKALLPPKYGVRTPQRVCELCACALAPHQQLLAG 299          
BLAST of mRNA_H-elongata_contig176230.4605.1 vs. uniprot
Match: A0A8J4CGS1_9CHLO (Uncharacterized protein n=2 Tax=Volvox TaxID=3066 RepID=A0A8J4CGS1_9CHLO)

HSP 1 Score: 66.6 bits (161), Expect = 1.670e-11
Identity = 26/51 (50.98%), Postives = 38/51 (74.51%), Query Frame = 0
Query:    1 QHHCRACGRLYCSACSRFRALLPRSFATRDPQRVCQPCNARVAPLQEMLVG 51
            +HHCR CG+++CSAC   +ALLP  +  R PQRVC+ C++ +AP Q++L G
Sbjct:  331 RHHCRLCGKIFCSACCHKKALLPPKYGIRTPQRVCELCSSVLAPHQQLLAG 381          
BLAST of mRNA_H-elongata_contig176230.4605.1 vs. uniprot
Match: A0A835WPF1_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WPF1_9CHLO)

HSP 1 Score: 66.2 bits (160), Expect = 2.290e-11
Identity = 27/51 (52.94%), Postives = 37/51 (72.55%), Query Frame = 0
Query:    1 QHHCRACGRLYCSACSRFRALLPRSFATRDPQRVCQPCNARVAPLQEMLVG 51
            +HHCR CG+++CSAC+  RALLP  +  R PQRVC+ C   +AP Q++L G
Sbjct:  346 RHHCRLCGKIFCSACAHKRALLPPKYGIRTPQRVCELCWTVLAPHQQLLAG 396          
BLAST of mRNA_H-elongata_contig176230.4605.1 vs. uniprot
Match: A0A835YAM0_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835YAM0_9CHLO)

HSP 1 Score: 66.2 bits (160), Expect = 2.290e-11
Identity = 26/51 (50.98%), Postives = 37/51 (72.55%), Query Frame = 0
Query:    1 QHHCRACGRLYCSACSRFRALLPRSFATRDPQRVCQPCNARVAPLQEMLVG 51
            +HHCR CG+++CSAC   RALLP  +  R PQRVC+ C++ + P Q++L G
Sbjct:  315 RHHCRLCGKIFCSACCHKRALLPPKYGVRTPQRVCELCSSVLQPHQQLLAG 365          
BLAST of mRNA_H-elongata_contig176230.4605.1 vs. uniprot
Match: A0A8J4B6M3_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4B6M3_9CHLO)

HSP 1 Score: 65.9 bits (159), Expect = 3.070e-11
Identity = 26/51 (50.98%), Postives = 38/51 (74.51%), Query Frame = 0
Query:    1 QHHCRACGRLYCSACSRFRALLPRSFATRDPQRVCQPCNARVAPLQEMLVG 51
            +HHCR CG+++CSAC   +ALLP  +  R PQRVC+ C++ +AP Q++L G
Sbjct:  329 RHHCRLCGKIFCSACCFKKALLPPKYGVRTPQRVCELCSSVLAPHQQLLAG 379          
BLAST of mRNA_H-elongata_contig176230.4605.1 vs. uniprot
Match: A0A0E0LJ79_ORYPU (FYVE-type domain-containing protein n=2 Tax=Oryza TaxID=4527 RepID=A0A0E0LJ79_ORYPU)

HSP 1 Score: 65.5 bits (158), Expect = 4.260e-11
Identity = 26/51 (50.98%), Postives = 35/51 (68.63%), Query Frame = 0
Query:    1 QHHCRACGRLYCSACSRFRALLPRSFATRDPQRVCQPCNARVAPLQEMLVG 51
            +HHCR CG ++C+ACS+ R LLP  F  R+PQRVC  C  R+ PLQ + + 
Sbjct:  205 RHHCRFCGGIFCTACSKGRCLLPAKFRERNPQRVCDACYDRLDPLQNLFIN 255          
BLAST of mRNA_H-elongata_contig176230.4605.1 vs. uniprot
Match: UPI0018AEA516 (uncharacterized protein LOC120280655 n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0018AEA516)

HSP 1 Score: 65.1 bits (157), Expect = 5.830e-11
Identity = 27/49 (55.10%), Postives = 34/49 (69.39%), Query Frame = 0
Query:    1 QHHCRACGRLYCSACSRFRALLPRSFATRDPQRVCQPCNARVAPLQEML 49
            +HHCR CG L+CS CS+ R+LLP  F T DPQRVC  C  R+  +Q +L
Sbjct:  244 RHHCRLCGGLFCSECSKGRSLLPSKFRTADPQRVCDVCGVRLESVQPLL 292          
BLAST of mRNA_H-elongata_contig176230.4605.1 vs. uniprot
Match: K3ZSN2_SETIT (FYVE-type domain-containing protein n=12 Tax=Panicoideae TaxID=147369 RepID=K3ZSN2_SETIT)

HSP 1 Score: 64.7 bits (156), Expect = 7.950e-11
Identity = 26/51 (50.98%), Postives = 35/51 (68.63%), Query Frame = 0
Query:    1 QHHCRACGRLYCSACSRFRALLPRSFATRDPQRVCQPCNARVAPLQEMLVG 51
            +HHCR CG ++C+ CS+ R LLP  F  R+PQRVC  C  R+ PLQ +L+ 
Sbjct:  206 RHHCRFCGGIFCTVCSKGRCLLPVKFRERNPQRVCDACYDRLDPLQNLLIN 256          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig176230.4605.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEA9_ECTSI1.840e-2079.59FYVE-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A835Z286_9STRA2.520e-1563.27FYVE-type domain-containing protein n=1 Tax=Tribon... [more]
A0A150GYM9_GONPE2.570e-1254.90FYVE-type domain-containing protein n=1 Tax=Gonium... [more]
A0A8J4CGS1_9CHLO1.670e-1150.98Uncharacterized protein n=2 Tax=Volvox TaxID=3066 ... [more]
A0A835WPF1_9CHLO2.290e-1152.94Uncharacterized protein n=1 Tax=Chlamydomonas schl... [more]
A0A835YAM0_9CHLO2.290e-1150.98Uncharacterized protein n=1 Tax=Edaphochlamys deba... [more]
A0A8J4B6M3_9CHLO3.070e-1150.98Uncharacterized protein n=1 Tax=Volvox africanus T... [more]
A0A0E0LJ79_ORYPU4.260e-1150.98FYVE-type domain-containing protein n=2 Tax=Oryza ... [more]
UPI0018AEA5165.830e-1155.10uncharacterized protein LOC120280655 n=1 Tax=Diosc... [more]
K3ZSN2_SETIT7.950e-1150.98FYVE-type domain-containing protein n=12 Tax=Panic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..46
e-value: 3.4E-12
score: 48.0
IPR000306FYVE zinc fingerPFAMPF01363FYVEcoord: 1..42
e-value: 2.3E-11
score: 43.7
NoneNo IPR availablePANTHERPTHR15629:SF30coord: 1..50
NoneNo IPR availablePANTHERPTHR15629SH3YL1 PROTEINcoord: 1..50
IPR017455Zinc finger, FYVE-relatedPROSITEPS50178ZF_FYVEcoord: 1..43
score: 9.681
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 1..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig176230contigH-elongata_contig176230:260..418 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig176230.4605.1mRNA_H-elongata_contig176230.4605.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig176230 260..418 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig176230.4605.1 ID=prot_H-elongata_contig176230.4605.1|Name=mRNA_H-elongata_contig176230.4605.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=53bp
QHHCRACGRLYCSACSRFRALLPRSFATRDPQRVCQPCNARVAPLQEMLV
GM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR000306Znf_FYVE
IPR017455Znf_FYVE-rel
IPR011011Znf_FYVE_PHD