prot_H-elongata_contig176112.4602.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig176112.4602.1
Unique Nameprot_H-elongata_contig176112.4602.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length87
Homology
BLAST of mRNA_H-elongata_contig176112.4602.1 vs. uniprot
Match: D8LF37_ECTSI (S1 motif domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF37_ECTSI)

HSP 1 Score: 78.2 bits (191), Expect = 4.690e-16
Identity = 36/68 (52.94%), Postives = 48/68 (70.59%), Query Frame = 0
Query:    1 MADIVCPGKRLGRVRDFRAGPGTYVRGAYIYASVLGPKEEEQTVSGGEDKPFIMVRDDTTAVPSRQCL 68
            M ++VCPGKRLGR  ++RAGPGTYVRG YIYASV+GPK E Q  +  + KP+++V     A  + Q +
Sbjct:    1 MTEVVCPGKRLGRASEYRAGPGTYVRGTYIYASVVGPKLE-QAAADEDGKPYLIVSQPKRARAADQVI 67          
BLAST of mRNA_H-elongata_contig176112.4602.1 vs. uniprot
Match: A0A015M391_RHIIW (ECR1_N domain-containing protein n=1 Tax=Rhizophagus irregularis (strain DAOM 197198w) TaxID=1432141 RepID=A0A015M391_RHIIW)

HSP 1 Score: 58.5 bits (140), Expect = 2.830e-9
Identity = 30/75 (40.00%), Postives = 43/75 (57.33%), Query Frame = 0
Query:    3 DIVCPGKRLGRVRDFRAGPGTYVRGAYIYASVLGPKEEEQTVSGGEDKPFIMVRDDTTAVPSRQCLLRTNQCGRL 77
            +IV PG+RLG  +D+ AGPGTYVRG  +YASV+G K   +  + GE     + R+   +     C L T +  R+
Sbjct:    5 NIVTPGQRLGFAQDYVAGPGTYVRGNLLYASVVGMKRVSKQTAEGETLVLTVSREKQQSAIPEVCSLITGKVIRI 79          
BLAST of mRNA_H-elongata_contig176112.4602.1 vs. uniprot
Match: A0A1R0H1K2_9FUNG (ECR1_N domain-containing protein n=1 Tax=Smittium mucronatum TaxID=133383 RepID=A0A1R0H1K2_9FUNG)

HSP 1 Score: 52.4 bits (124), Expect = 3.650e-7
Identity = 28/59 (47.46%), Postives = 35/59 (59.32%), Query Frame = 0
Query:    2 ADIVCPGKRLGRVRDFRAGPGTYVRGAYIYASVLGPKEEEQTVSGGE-------DKPFI 53
            +  V  G+RLGRV+D+ AG GTYVR   I +SVLG K  E+T   G+       D PFI
Sbjct:    4 SSTVVVGQRLGRVQDYVAGDGTYVRNGMIISSVLGKKAVEETTETGQKVLDSWCDTPFI 62          
BLAST of mRNA_H-elongata_contig176112.4602.1 vs. uniprot
Match: A0A397T025_9GLOM (S1 motif domain-containing protein n=7 Tax=Glomeraceae TaxID=36751 RepID=A0A397T025_9GLOM)

HSP 1 Score: 53.9 bits (128), Expect = 8.580e-7
Identity = 25/61 (40.98%), Postives = 37/61 (60.66%), Query Frame = 0
Query:    3 DIVCPGKRLGRVRDFRAGPGTYVRGAYIYASVLGPKEEEQTVSGGEDKPFIMVRDDTTAVP 63
            +IV PG+RLG  +D+ +GPGTYVRG  +YASV+G K   +  +G      +      +A+P
Sbjct:    5 NIVTPGQRLGFAQDYVSGPGTYVRGNLLYASVVGMKRVTKQTTGESPMLTVSREKQQSAIP 65          
BLAST of mRNA_H-elongata_contig176112.4602.1 vs. uniprot
Match: A0A8H8A006_9FUNG (ECR1_N domain-containing protein n=1 Tax=Olpidium bornovanus TaxID=278681 RepID=A0A8H8A006_9FUNG)

HSP 1 Score: 51.6 bits (122), Expect = 2.200e-6
Identity = 23/36 (63.89%), Postives = 28/36 (77.78%), Query Frame = 0
Query:    1 MADIVCPGKRLGRVRDFRAGPGTYVRGAYIYASVLG 36
            MAD+V PG+RLG + D+  GPGTYVRG  I ASV+G
Sbjct:    1 MADVVVPGQRLGYLDDYSPGPGTYVRGDLILASVVG 36          
BLAST of mRNA_H-elongata_contig176112.4602.1 vs. uniprot
Match: A0A4P9ZXX5_9FUNG (S1 motif domain-containing protein n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4P9ZXX5_9FUNG)

HSP 1 Score: 52.8 bits (125), Expect = 2.570e-6
Identity = 28/70 (40.00%), Postives = 40/70 (57.14%), Query Frame = 0
Query:    4 IVCPGKRLGRVRDFRAGPGTYVRGAYIYASVLGPKEEEQT--VSGGEDKP--------FIMVRDDTTAVP 63
            IV PG RLG+  D +AGPGTY+R  +IYAS LG  ++  T   +  ED+         F+  R + ++VP
Sbjct:    5 IVTPGLRLGKTSDLQAGPGTYIRDGFIYASTLGTLKQFATPAAAAAEDETDPDPRPTLFVAPRKELSSVP 74          
BLAST of mRNA_H-elongata_contig176112.4602.1 vs. uniprot
Match: A0A383WIF6_TETOB (S1 motif domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WIF6_TETOB)

HSP 1 Score: 50.4 bits (119), Expect = 1.690e-5
Identity = 25/55 (45.45%), Postives = 33/55 (60.00%), Query Frame = 0
Query:    1 MADIVCPGKRLGRVRDFRAGPGTYVRGAYIYASVLGPKEEEQTVSGGEDKPFIMV 55
            MA +VC G RL      +AG GTYVRG +IYAS++G    +Q V  G D+  + V
Sbjct:    1 MAALVCVGDRLASADSLQAGTGTYVRGGFIYASIVGL---QQVVHEGTDEAVVQV 52          
BLAST of mRNA_H-elongata_contig176112.4602.1 vs. uniprot
Match: W7U6U4_9STRA (3-5 exoribonuclease csl4 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U6U4_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 2.230e-5
Identity = 23/52 (44.23%), Postives = 33/52 (63.46%), Query Frame = 0
Query:    4 IVCPGKRLGRVRDFRAGPGTYVRGAYIYASVLGPKEEEQTVSGGEDKPFIMV 55
            I  PG R+GR+   ++GPGTY++G +IYAS+LG  +  Q    G D P + V
Sbjct:   14 IAAPGDRIGRISSHQSGPGTYIKGGHIYASILGNIQILQPEKEG-DLPMLRV 64          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig176112.4602.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LF37_ECTSI4.690e-1652.94S1 motif domain-containing protein n=2 Tax=Ectocar... [more]
A0A015M391_RHIIW2.830e-940.00ECR1_N domain-containing protein n=1 Tax=Rhizophag... [more]
A0A1R0H1K2_9FUNG3.650e-747.46ECR1_N domain-containing protein n=1 Tax=Smittium ... [more]
A0A397T025_9GLOM8.580e-740.98S1 motif domain-containing protein n=7 Tax=Glomera... [more]
A0A8H8A006_9FUNG2.200e-663.89ECR1_N domain-containing protein n=1 Tax=Olpidium ... [more]
A0A4P9ZXX5_9FUNG2.570e-640.00S1 motif domain-containing protein n=1 Tax=Dimarga... [more]
A0A383WIF6_TETOB1.690e-545.45S1 motif domain-containing protein n=1 Tax=Tetrade... [more]
W7U6U4_9STRA2.230e-544.233-5 exoribonuclease csl4 n=1 Tax=Nannochloropsis g... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025721Exosome complex component, N-terminal domainPFAMPF14382ECR1_Ncoord: 4..37
e-value: 2.1E-12
score: 46.6
NoneNo IPR availableGENE3D2.40.50.100coord: 3..48
e-value: 4.0E-14
score: 53.8
NoneNo IPR availableSUPERFAMILY110324Ribosomal L27 protein-likecoord: 3..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig176112contigH-elongata_contig176112:487..747 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig176112.4602.1mRNA_H-elongata_contig176112.4602.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig176112 487..747 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig176112.4602.1 ID=prot_H-elongata_contig176112.4602.1|Name=mRNA_H-elongata_contig176112.4602.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=87bp
MADIVCPGKRLGRVRDFRAGPGTYVRGAYIYASVLGPKEEEQTVSGGEDK
PFIMVRDDTTAVPSRQCLLRTNQCGRLHLFIDQRHR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025721Exosome_cplx_N_dom