prot_H-elongata_contig175675.4583.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig175675.4583.1
Unique Nameprot_H-elongata_contig175675.4583.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length71
Homology
BLAST of mRNA_H-elongata_contig175675.4583.1 vs. uniprot
Match: A0A6H5KH94_9PHAE (GH16 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KH94_9PHAE)

HSP 1 Score: 147 bits (370), Expect = 9.190e-40
Identity = 62/69 (89.86%), Postives = 66/69 (95.65%), Query Frame = 0
Query:    3 AKLPGEHDIGGLWPAFWILGNLGRATYEASTNLIWPWSYDKCDPKKQRAQEISACNKVNHFGMHPYQVR 71
            AKLPGEH+IGGLWPAFW+LGNLGRATYEASTNLIWPWSYDKCDPK QRAQEISACNK+NHFG+H YQ R
Sbjct:  199 AKLPGEHNIGGLWPAFWLLGNLGRATYEASTNLIWPWSYDKCDPKLQRAQEISACNKINHFGLHGYQGR 267          
BLAST of mRNA_H-elongata_contig175675.4583.1 vs. uniprot
Match: A0A835YN37_9STRA (Beta-1,6-glucan active enzyme, family GH16 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN37_9STRA)

HSP 1 Score: 130 bits (326), Expect = 1.020e-33
Identity = 55/71 (77.46%), Postives = 62/71 (87.32%), Query Frame = 0
Query:    1 MRAKLPGEHDIGGLWPAFWILGNLGRATYEASTNLIWPWSYDKCDPKKQRAQEISACNKVNHFGMHPYQVR 71
            MRA LPGEH+IGGLWPAFW+LGNLGRATYEASTNL+WPWSY++C+ K Q  QEISACN V HFGMH +Q R
Sbjct:  155 MRAILPGEHNIGGLWPAFWLLGNLGRATYEASTNLVWPWSYNRCNRKLQLGQEISACNGVKHFGMHAHQGR 225          
BLAST of mRNA_H-elongata_contig175675.4583.1 vs. uniprot
Match: A0A7S0FND9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FND9_9STRA)

HSP 1 Score: 112 bits (280), Expect = 3.770e-30
Identity = 46/60 (76.67%), Postives = 51/60 (85.00%), Query Frame = 0
Query:   12 GGLWPAFWILGNLGRATYEASTNLIWPWSYDKCDPKKQRAQEISACNKVNHFGMHPYQVR 71
            GGLWPA WILGNLGR+TYE STN IWPWSY+ CD KKQ AQ +SACN+ NH+GMHPYQ R
Sbjct:    1 GGLWPAIWILGNLGRSTYEVSTNNIWPWSYNTCDRKKQEAQALSACNRQNHYGMHPYQGR 60          
BLAST of mRNA_H-elongata_contig175675.4583.1 vs. uniprot
Match: K0TJA7_THAOC (GH16 domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TJA7_THAOC)

HSP 1 Score: 119 bits (297), Expect = 4.850e-30
Identity = 49/67 (73.13%), Postives = 56/67 (83.58%), Query Frame = 0
Query:    5 LPGEHDIGGLWPAFWILGNLGRATYEASTNLIWPWSYDKCDPKKQRAQEISACNKVNHFGMHPYQVR 71
            LPGE DIGGLWPA W+LGNLGRATYE STN++WPWSYD CD KKQ +Q +SACNK NHFG++  Q R
Sbjct:  153 LPGEPDIGGLWPAAWLLGNLGRATYEGSTNMLWPWSYDDCDRKKQESQMVSACNKANHFGLNKNQGR 219          
BLAST of mRNA_H-elongata_contig175675.4583.1 vs. uniprot
Match: A0A7S0Y7A0_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0Y7A0_9STRA)

HSP 1 Score: 118 bits (296), Expect = 1.240e-29
Identity = 51/67 (76.12%), Postives = 57/67 (85.07%), Query Frame = 0
Query:    5 LPGEHDIGGLWPAFWILGNLGRATYEASTNLIWPWSYDKCDPKKQRAQEISACNKVNHFGMHPYQVR 71
            LPG+  IGGLWPA W+LGNLGRATYEASTN IWPWS++KCD K Q AQ ISACN+ NHFGMHP+Q R
Sbjct:   38 LPGDPLIGGLWPAIWMLGNLGRATYEASTNNIWPWSFNKCDRKLQPAQAISACNEQNHFGMHPFQGR 104          
BLAST of mRNA_H-elongata_contig175675.4583.1 vs. uniprot
Match: B7G6N6_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G6N6_PHATC)

HSP 1 Score: 115 bits (289), Expect = 1.710e-28
Identity = 49/66 (74.24%), Postives = 55/66 (83.33%), Query Frame = 0
Query:    6 PGEHDIGGLWPAFWILGNLGRATYEASTNLIWPWSYDKCDPKKQRAQEISACNKVNHFGMHPYQVR 71
            PGE  IGGLWPA W+LGNLGRATYEASTN IWPWS+D CD + Q AQ ISACN+ NH+GMHP+Q R
Sbjct:  202 PGEPFIGGLWPAVWMLGNLGRATYEASTNNIWPWSFDTCDREMQDAQAISACNRENHYGMHPFQGR 267          
BLAST of mRNA_H-elongata_contig175675.4583.1 vs. uniprot
Match: A0A482SXU5_9ARCH (GH16 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SXU5_9ARCH)

HSP 1 Score: 112 bits (280), Expect = 2.990e-28
Identity = 45/68 (66.18%), Postives = 56/68 (82.35%), Query Frame = 0
Query:    4 KLPGEHDIGGLWPAFWILGNLGRATYEASTNLIWPWSYDKCDPKKQRAQEISACNKVNHFGMHPYQVR 71
            + PG HDIGGLWPA W+LGNLGRAT+EASTNL+WPWSY+ CD   Q+AQEIS C+  +HFG++ +Q R
Sbjct:  148 QFPGRHDIGGLWPAVWLLGNLGRATFEASTNLMWPWSYEVCDRSLQKAQEISGCDITSHFGLNAHQGR 215          
BLAST of mRNA_H-elongata_contig175675.4583.1 vs. uniprot
Match: A0A1E7FFY3_9STRA (Beta-glucan synthase-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FFY3_9STRA)

HSP 1 Score: 113 bits (283), Expect = 1.080e-27
Identity = 49/67 (73.13%), Postives = 55/67 (82.09%), Query Frame = 0
Query:    5 LPGEHDIGGLWPAFWILGNLGRATYEASTNLIWPWSYDKCDPKKQRAQEISACNKVNHFGMHPYQVR 71
            LPG+  IGGLWPA W+LGNLGRATYEASTN IWPWS+D CD K Q AQ+ISACN  NH+GM+ YQ R
Sbjct:  164 LPGDPFIGGLWPAIWMLGNLGRATYEASTNNIWPWSFDTCDRKLQPAQKISACNSQNHYGMNAYQGR 230          
BLAST of mRNA_H-elongata_contig175675.4583.1 vs. uniprot
Match: A0A7S1ZB15_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZB15_TRICV)

HSP 1 Score: 112 bits (281), Expect = 1.190e-27
Identity = 47/67 (70.15%), Postives = 55/67 (82.09%), Query Frame = 0
Query:    5 LPGEHDIGGLWPAFWILGNLGRATYEASTNLIWPWSYDKCDPKKQRAQEISACNKVNHFGMHPYQVR 71
            LPG+  IGGLWPA W+LGN+GRATYEASTN IWPWSYD+CD   QR Q ISAC++ NH+GM+P Q R
Sbjct:  162 LPGDPYIGGLWPAIWLLGNIGRATYEASTNNIWPWSYDECDRSLQRKQSISACDEANHYGMNPRQGR 228          
BLAST of mRNA_H-elongata_contig175675.4583.1 vs. uniprot
Match: A0A1Z5KN53_FISSO (GH16 domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KN53_FISSO)

HSP 1 Score: 113 bits (282), Expect = 1.490e-27
Identity = 48/66 (72.73%), Postives = 54/66 (81.82%), Query Frame = 0
Query:    6 PGEHDIGGLWPAFWILGNLGRATYEASTNLIWPWSYDKCDPKKQRAQEISACNKVNHFGMHPYQVR 71
            PGE  IGGLWPA W+LGNLGRATYE STN +WPWSY+KCD + Q+AQ ISACN  NH+GMHP Q R
Sbjct:  157 PGEAYIGGLWPAIWMLGNLGRATYEPSTNNLWPWSYNKCDRELQQAQTISACNAQNHYGMHPNQGR 222          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig175675.4583.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KH94_9PHAE9.190e-4089.86GH16 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835YN37_9STRA1.020e-3377.46Beta-1,6-glucan active enzyme, family GH16 n=1 Tax... [more]
A0A7S0FND9_9STRA3.770e-3076.67Hypothetical protein (Fragment) n=1 Tax=Minutocell... [more]
K0TJA7_THAOC4.850e-3073.13GH16 domain-containing protein n=1 Tax=Thalassiosi... [more]
A0A7S0Y7A0_9STRA1.240e-2976.12Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
B7G6N6_PHATC1.710e-2874.24Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A482SXU5_9ARCH2.990e-2866.18GH16 domain-containing protein n=1 Tax=archaeon Ta... [more]
A0A1E7FFY3_9STRA1.080e-2773.13Beta-glucan synthase-like protein n=1 Tax=Fragilar... [more]
A0A7S1ZB15_TRICV1.190e-2770.15Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A1Z5KN53_FISSO1.490e-2772.73GH16 domain-containing protein n=2 Tax=Fistulifera... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005629Beta-glucan synthesis-associated, Skn1PFAMPF03935SKN1coord: 3..46
e-value: 5.0E-18
score: 64.8
IPR005629Beta-glucan synthesis-associated, Skn1PANTHERPTHR31361FAMILY NOT NAMEDcoord: 8..71
NoneNo IPR availablePANTHERPTHR31361:SF1BETA-GLUCAN SYNTHESIS-ASSOCIATED PROTEIN KRE6-RELATEDcoord: 8..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig175675contigH-elongata_contig175675:507..1082 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig175675.4583.1mRNA_H-elongata_contig175675.4583.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig175675 492..1082 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig175675.4583.1 ID=prot_H-elongata_contig175675.4583.1|Name=mRNA_H-elongata_contig175675.4583.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=71bp
MRAKLPGEHDIGGLWPAFWILGNLGRATYEASTNLIWPWSYDKCDPKKQR
AQEISACNKVNHFGMHPYQVR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005629Skn1