mRNA_H-elongata_contig105491.453.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig105491.453.1 vs. uniprot
Match: D7G0J8_ECTSI (Putative scytonemin-related tyrosinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0J8_ECTSI) HSP 1 Score: 147 bits (372), Expect = 1.900e-39 Identity = 63/94 (67.02%), Postives = 75/94 (79.79%), Query Frame = 1
Query: 1 HVGEMYTSAAPYDPIFWVIHPEAERFLSWRRILGREGIEGYDFDETWGYRHVGGIVGDTGAVCDWSTVRPGTLDMPSCFKKTCGGHYATDTLPF 282
+VGEMYTSAAPYDP+FWVIHP A+R L+WRR+LGR+G EG+DFDETWGY H +VG+TG VC+W V PG+ DMP+C K CGGH D LPF
Sbjct: 520 NVGEMYTSAAPYDPLFWVIHPTADRLLAWRRMLGRQGAEGWDFDETWGYAH-SSVVGETGTVCNWDDVVPGSGDMPTCVKGICGGHNEDDLLPF 612
BLAST of mRNA_H-elongata_contig105491.453.1 vs. uniprot
Match: A0A6H5LKB4_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LKB4_9PHAE) HSP 1 Score: 145 bits (367), Expect = 7.190e-39 Identity = 60/93 (64.52%), Postives = 74/93 (79.57%), Query Frame = 1
Query: 4 VGEMYTSAAPYDPIFWVIHPEAERFLSWRRILGREGIEGYDFDETWGYRHVGGIVGDTGAVCDWSTVRPGTLDMPSCFKKTCGGHYATDTLPF 282
VGEM+TSAAPYDP+FWV+HP A+R L+WRR+LGR+G+EG+DFDETWGY H +VG+TG VC+W V PG+ DMP+C CGGH D LPF
Sbjct: 521 VGEMFTSAAPYDPVFWVVHPTADRLLAWRRMLGRQGVEGWDFDETWGYTHTS-VVGETGTVCNWDDVVPGSGDMPTCITGICGGHNEDDLLPF 612
BLAST of mRNA_H-elongata_contig105491.453.1 vs. uniprot
Match: D7FSP4_ECTSI (PKD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSP4_ECTSI) HSP 1 Score: 140 bits (353), Expect = 7.500e-37 Identity = 61/94 (64.89%), Postives = 72/94 (76.60%), Query Frame = 1
Query: 1 HVGEMYTSAAPYDPIFWVIHPEAERFLSWRRILGREGIEGYDFDETWGYRHVGGIVGDTGAVCDWSTVRPGTLDMPSCFKKTCGGHYATDTLPF 282
HVGE+Y+S+APYDP+FWVIHP AERF+ W+R L RE + + F E WGY H G +VG+TG VCDWS VR GTLDMP+C K CGGH A D LPF
Sbjct: 547 HVGELYSSSAPYDPLFWVIHPTAERFMGWKRKLARERPDVHPFSEDWGYTH-GNVVGETGMVCDWSGVRQGTLDMPTCVKGICGGHSAGDLLPF 639
BLAST of mRNA_H-elongata_contig105491.453.1 vs. uniprot
Match: D7G0J9_ECTSI (PKD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0J9_ECTSI) HSP 1 Score: 138 bits (347), Expect = 4.680e-36 Identity = 61/94 (64.89%), Postives = 71/94 (75.53%), Query Frame = 1
Query: 1 HVGEMYTSAAPYDPIFWVIHPEAERFLSWRRILGREGIEGYDFDETWGYRHVGGIVGDTGAVCDWSTVRPGTLDMPSCFKKTCGGHYATDTLPF 282
HVGE+YTS+APYDP+FWVIHP AERF+ WRR LG E + + DETW Y H G +VG+TG VCDW VR G+LDMP+C K CGGH A D LPF
Sbjct: 529 HVGELYTSSAPYDPLFWVIHPTAERFMGWRRKLGVEQPDMWPLDETWDYSH-GWVVGETGTVCDWDDVREGSLDMPTCRKGICGGHGADDLLPF 621
BLAST of mRNA_H-elongata_contig105491.453.1 vs. uniprot
Match: A0A6H5L3M0_9PHAE (PKD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3M0_9PHAE) HSP 1 Score: 135 bits (339), Expect = 5.840e-35 Identity = 61/94 (64.89%), Postives = 69/94 (73.40%), Query Frame = 1
Query: 1 HVGEMYTSAAPYDPIFWVIHPEAERFLSWRRILGREGIEGYDFDETWGYRHVGGIVGDTGAVCDWSTVRPGTLDMPSCFKKTCGGHYATDTLPF 282
HVGE+YTS+APYDP+FWVIHP AERFLSWRR L E + + DETWGY H G +VG+TG VCDWS V LDMPSC + CGGH D LPF
Sbjct: 524 HVGELYTSSAPYDPLFWVIHPTAERFLSWRRKLATERPDVWALDETWGYSH-GHVVGETGVVCDWSGVGDDFLDMPSCVRGICGGHGVDDMLPF 616
BLAST of mRNA_H-elongata_contig105491.453.1 vs. uniprot
Match: A0A7S2CY94_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CY94_9STRA) HSP 1 Score: 109 bits (272), Expect = 4.450e-28 Identity = 50/98 (51.02%), Postives = 64/98 (65.31%), Query Frame = 1
Query: 1 HVGEMYTSAAPYDPIFWVIHPEAERFLSWRRILGREGIEGYDFDETWGYRH--VGGIV--GDTGAVCDWSTVRPGTLDMPSCFKKTCGGHYATDTLPF 282
H GEM+TSAAPYDP FW IH A+RFLSW+RIL G+ D+DE+W Y H G+ D G VCDW+ VR G D+P+C K+ C GH + +P+
Sbjct: 60 HAGEMFTSAAPYDPTFWPIHTTADRFLSWKRILRANGL--IDWDESWAYVHDMAPGMTPASDAGQVCDWTAVRDGLFDLPNCSKQICPGHLPFEEIPW 155
BLAST of mRNA_H-elongata_contig105491.453.1 vs. uniprot
Match: A0A7S2AY68_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AY68_9STRA) HSP 1 Score: 107 bits (267), Expect = 1.110e-26 Identity = 46/93 (49.46%), Postives = 59/93 (63.44%), Query Frame = 1
Query: 1 HVGEMYTSAAPYDPIFWVIHPEAERFLSWRRILGREGIEGYDFDETWGYRHVGGIVGDTGAVCDWSTVRPGTLDMPSCFKKTCGGHYATDTLP 279
+VGE+YTS AP DP+FW IH AER ++W+RIL +G+ DF++TWGY H DTG VC+W V G MP+C + C GH D LP
Sbjct: 49 YVGELYTSNAPMDPLFWPIHTSAERMMNWKRILSHKGL--VDFNQTWGYAHPADTPSDTGTVCNWEAVDAGVATMPTCQVQECEGHGENDMLP 139
BLAST of mRNA_H-elongata_contig105491.453.1 vs. uniprot
Match: A0A7S2AXN9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AXN9_9STRA) HSP 1 Score: 109 bits (272), Expect = 3.250e-26 Identity = 50/94 (53.19%), Postives = 60/94 (63.83%), Query Frame = 1
Query: 1 HVGEMYTSAAPYDPIFWVIHPEAERFLSWRRILGREGIEGYDFDETWGYRHVGGIVGDTGAVCDWSTVRPGTLDMPSCFKKTCGGHYATDTLPF 282
H GEMYTSAAPYDP FW+IHP AER LSWRR+L + + F++TWGY H G D G +C+W V +P C+ TC GH A DT PF
Sbjct: 279 HPGEMYTSAAPYDPTFWLIHPSAERMLSWRRMLDHLSV--HTFNQTWGYSHQGDP-SDMGQICEWDDVSD--FGLPFCYDSTCPGHNAADTTPF 367
BLAST of mRNA_H-elongata_contig105491.453.1 vs. uniprot
Match: F0Y8V5_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y8V5_AURAN) HSP 1 Score: 109 bits (272), Expect = 9.000e-26 Identity = 48/92 (52.17%), Postives = 61/92 (66.30%), Query Frame = 1
Query: 7 GEMYTSAAPYDPIFWVIHPEAERFLSWRRILGREGIEGYDFDETWGYRHVGGIVGDTGAVCDWSTVRPGTLDMPSCFKKTCGGHYATDTLPF 282
GEM+TSAAP DPIFW +H AERFL + R++ G+ D +ETWGY HV + DTG VC+W GT+ MP C ++TC GH + D LPF
Sbjct: 481 GEMFTSAAPQDPIFWPLHGNAERFLQYIRLVAATGV--IDLNETWGYEHVSDVASDTGVVCNWDNAT-GTMGMPHCTRETCPGHRSDDLLPF 569
BLAST of mRNA_H-elongata_contig105491.453.1 vs. uniprot
Match: A0A7S2CGQ1_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CGQ1_9STRA) HSP 1 Score: 108 bits (270), Expect = 1.580e-25 Identity = 51/94 (54.26%), Postives = 59/94 (62.77%), Query Frame = 1
Query: 1 HVGEMYTSAAPYDPIFWVIHPEAERFLSWRRILGREGIEGYDFDETWGYRHVGGIVGDTGAVCDWSTVRPGTLDMPSCFKKTCGGHYATDTLPF 282
H GEMYTSAAPYDP FWV+H AER L +RR+ DETWG+ H+ D G VCDWS+V G +P+C K C GH ATDTLPF
Sbjct: 507 HAGEMYTSAAPYDPTFWVLHTAAERLLQYRRMQADVS----PLDETWGFAHMN-AASDVGVVCDWSSVENGGDSLPTCTAKLCEGHGATDTLPF 595 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig105491.453.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig105491.453.1 >prot_H-elongata_contig105491.453.1 ID=prot_H-elongata_contig105491.453.1|Name=mRNA_H-elongata_contig105491.453.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=90bp MYTSAAPYDPIFWVIHPEAERFLSWRRILGREGIEGYDFDETWGYRHVGGback to top mRNA from alignment at H-elongata_contig105491:475..921+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig105491.453.1 ID=mRNA_H-elongata_contig105491.453.1|Name=mRNA_H-elongata_contig105491.453.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=447bp|location=Sequence derived from alignment at H-elongata_contig105491:475..921+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig105491:475..921+ >mRNA_H-elongata_contig105491.453.1 ID=mRNA_H-elongata_contig105491.453.1|Name=mRNA_H-elongata_contig105491.453.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=540bp|location=Sequence derived from alignment at H-elongata_contig105491:475..921+ (Himanthalia elongata Himel1 dioecious)back to top |