mRNA_H-elongata_contig173894.4516.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig173894.4516.1 vs. uniprot
Match: D7FZ64_ECTSI (Long chain acyl-CoA synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ64_ECTSI) HSP 1 Score: 160 bits (405), Expect = 9.190e-44 Identity = 77/108 (71.30%), Postives = 88/108 (81.48%), Query Frame = 1
Query: 1 WQSLPEMWDFLAIECGDQIAVVDPIHPALGTDGERGGKVTEARLSYSEIRASVRKMAAALAVLGIQRSDCVSVFSENSYRWLIAEQGVMIAGGCNAVRGATAPVPELR 324
W SLPEMWDFLA ECGD A+VDP+HP DG+R K +E RL+YSE+R S+ MAAAL LG+++ DCVSVFSENSYRWLIAEQG+M AGGCNAVRGATAPV ELR
Sbjct: 49 WNSLPEMWDFLAGECGDLTAIVDPVHPPDMPDGKRPPKGSETRLTYSEMRTSIGSMAAALIGLGLEKQDCVSVFSENSYRWLIAEQGIMKAGGCNAVRGATAPVAELR 156
BLAST of mRNA_H-elongata_contig173894.4516.1 vs. uniprot
Match: A0A7S2Y1P6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1P6_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 3.630e-24 Identity = 52/108 (48.15%), Postives = 70/108 (64.81%), Query Frame = 1
Query: 1 WQSLPEMWDFLAIECGDQIAVVDPIHPALGTDGERGGKVTEARLSYSEIRASVRKMAAALAVLGIQRSDCVSVFSENSYRWLIAEQGVMIAGGCNAVRGATAPVPELR 324
+ + ++WD L EC D A+VD IH GE A+ ++ E+R + A AL LG+++ DCVS+FSENS+RWL+ EQ +M AGGCNAVRGATAPV EL+
Sbjct: 82 FSRITDIWDNLVKECPDNTAIVDDIH------GE------PAQYTFKELRQLIIDGAGALQSLGLEKGDCVSMFSENSHRWLVLEQAIMKAGGCNAVRGATAPVGELQ 177
BLAST of mRNA_H-elongata_contig173894.4516.1 vs. uniprot
Match: A0A836C922_9STRA (Long-chain acyl-CoA synthetase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C922_9STRA) HSP 1 Score: 100 bits (250), Expect = 1.420e-22 Identity = 50/105 (47.62%), Postives = 68/105 (64.76%), Query Frame = 1
Query: 10 LPEMWDFLAIECGDQIAVVDPIHPALGTDGERGGKVTEARLSYSEIRASVRKMAAALAVLGIQRSDCVSVFSENSYRWLIAEQGVMIAGGCNAVRGATAPVPELR 324
+P++W F+ +C QIA+VD +H G +T +Y+E+R + ++A A LG+ CVSVFSENS RWL AEQG+M+AGGCNAVRG APV EL+
Sbjct: 88 VPDLWTFMEKQCPSQIAIVDALH----------GGITVV-YTYAELRERIVRLAGAFQALGLAPGQCVSVFSENSNRWLTAEQGIMLAGGCNAVRGVAAPVEELQ 181
BLAST of mRNA_H-elongata_contig173894.4516.1 vs. uniprot
Match: A0A5J4YJZ8_PORPP (Putative acyl-activating enzyme 16, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YJZ8_PORPP) HSP 1 Score: 89.0 bits (219), Expect = 2.200e-18 Identity = 45/107 (42.06%), Postives = 68/107 (63.55%), Query Frame = 1
Query: 4 QSLPEMWDFLAIECGDQIAVVDPIHPALGTDGERGGKVTEARLSYSEIRASVRKMAAALAVLGIQRSDCVSVFSENSYRWLIAEQGVMIAGGCNAVRGATAPVPELR 324
+SLPE+W + G + A++DP P+ G T L+++E+ A +R +A L LG++R + VS+FSENS+RWLIA+Q V +AG +AVRG AP PE++
Sbjct: 153 ESLPELWLLAERQFGSRTAIIDPYCPS--------GNTT---LTFAELAAQIRAFSAGLRQLGLRRKETVSLFSENSHRWLIADQAVQMAGASSAVRGVAAPAPEIQ 248
BLAST of mRNA_H-elongata_contig173894.4516.1 vs. uniprot
Match: W7TIG2_9STRA (Long-chain acyl-synthetase (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIG2_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 5.390e-17 Identity = 41/108 (37.96%), Postives = 65/108 (60.19%), Query Frame = 1
Query: 1 WQSLPEMWDFLAIECGDQIAVVDPIHPALGTDGERGGKVTEARLSYSEIRASVRKMAAALAVLGIQRSDCVSVFSENSYRWLIAEQGVMIAGGCNAVRGATAPVPELR 324
W++LP++++ +A + +AV D +H A+++Y E+ + +AA G++ CVSVF+ENS+RWLIA+Q ++ AG CNAVRG APV EL+
Sbjct: 121 WRTLPDVFETVASLAPEAVAVEDMVH------------TPTAKMTYGELNRQIGALAAFFQHEGLKPGQCVSVFAENSHRWLIADQAILKAGACNAVRGVKAPVDELQ 216
BLAST of mRNA_H-elongata_contig173894.4516.1 vs. uniprot
Match: UPI001263198C (probable acyl-activating enzyme 16, chloroplastic n=1 Tax=Pistacia vera TaxID=55513 RepID=UPI001263198C) HSP 1 Score: 83.6 bits (205), Expect = 1.700e-16 Identity = 38/107 (35.51%), Postives = 65/107 (60.75%), Query Frame = 1
Query: 1 WQSLPEMWDFLAIECGDQIAVVDPIHPALGTDGERGGKVTEARLSYSEIRASVRKMAAALAVLGIQRSDCVSVFSENSYRWLIAEQGVMIAGGCNAVRGATAPVPEL 321
WQ++P++W + A + GD++A+VDP H + ++Y ++ + A L VLG++ + +S+F++NSYRWL+A+QG+M G N VRG+ + V EL
Sbjct: 91 WQAVPDIWRYSAEKYGDRVALVDPYHDPPSS------------ITYKQLEQEILDFAEGLRVLGVKPEEKLSLFADNSYRWLVADQGMMATGAINVVRGSRSSVEEL 185
BLAST of mRNA_H-elongata_contig173894.4516.1 vs. uniprot
Match: A0A1Y1ISR1_KLENI (Acyl-ACP Synthetase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1ISR1_KLENI) HSP 1 Score: 83.6 bits (205), Expect = 1.700e-16 Identity = 41/108 (37.96%), Postives = 65/108 (60.19%), Query Frame = 1
Query: 1 WQSLPEMWDFLAIECGDQIAVVDPIHPALGTDGERGGKVTEARLSYSEIRASVRKMAAALAVLGIQRSDCVSVFSENSYRWLIAEQGVMIAGGCNAVRGATAPVPELR 324
W+ LP MW LA + GD++A+ DP + +++Y E+ ++ + L + GI+ D V +FS+NS+RW+IA+QG+M+AG +AVRGA AP EL+
Sbjct: 134 WEVLPAMWHTLAQKYGDRVALDDP------------HRKPHIKMTYKELEQAIVDFSEGLRLYGIKAGDRVGLFSDNSHRWIIADQGIMMAGAVDAVRGAKAPAEELK 229
BLAST of mRNA_H-elongata_contig173894.4516.1 vs. uniprot
Match: A0A4D9CQD3_9STRA (AMP-binding domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CQD3_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 2.320e-16 Identity = 41/108 (37.96%), Postives = 65/108 (60.19%), Query Frame = 1
Query: 1 WQSLPEMWDFLAIECGDQIAVVDPIHPALGTDGERGGKVTEARLSYSEIRASVRKMAAALAVLGIQRSDCVSVFSENSYRWLIAEQGVMIAGGCNAVRGATAPVPELR 324
W++LP++++ +A + +AV D +H A+++Y E+ + +AA G++ CVSVF+ENS+RWLIA+Q ++ AG CNAVRG APV EL+
Sbjct: 121 WRTLPDVFETVASLAPEAVAVEDMVH------------TPTAKMTYGELNRQIGALAAFFQHEGLKPGQCVSVFAENSHRWLIADQAILKAGACNAVRGVKAPVDELQ 216
BLAST of mRNA_H-elongata_contig173894.4516.1 vs. uniprot
Match: A0A8J7E499_9CYAN (AMP-binding protein n=1 Tax=Nodosilinea sp. LEGE 07088 TaxID=2777968 RepID=A0A8J7E499_9CYAN) HSP 1 Score: 82.4 bits (202), Expect = 4.270e-16 Identity = 42/106 (39.62%), Postives = 63/106 (59.43%), Query Frame = 1
Query: 4 QSLPEMWDFLAIECGDQIAVVDPIHPALGTDGERGGKVTEARLSYSEIRASVRKMAAALAVLGIQRSDCVSVFSENSYRWLIAEQGVMIAGGCNAVRGATAPVPEL 321
Q+LPE+W +A + GD +A+ DP + T L+Y ++ ++R A+ L +G+ V++F++NSYRW IA+QG+M AGG NAVR ATA EL
Sbjct: 29 QALPEIWPIVAEKYGDIVALHDPHSQPVAT------------LTYRQLAEAIRTFASGLQAIGVNYQTHVALFADNSYRWFIADQGIMTAGGMNAVRSATAETEEL 122
BLAST of mRNA_H-elongata_contig173894.4516.1 vs. uniprot
Match: A0A0G4EEM4_VITBC (AMP-binding domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EEM4_VITBC) HSP 1 Score: 82.4 bits (202), Expect = 4.370e-16 Identity = 43/105 (40.95%), Postives = 64/105 (60.95%), Query Frame = 1
Query: 7 SLPEMWDFLAIECGDQIAVVDPIHPALGTDGERGGKVTEARLSYSEIRASVRKMAAALAVLGIQRSDCVSVFSENSYRWLIAEQGVMIAGGCNAVRGATAPVPEL 321
S+PEMW L GD+ A+ DP H G DGE GG+ L+Y ++ +R + + LA G+ + D V+ +ENS+RW+I +Q +M+AGG + RGA A + EL
Sbjct: 81 SIPEMWPLLTERFGDRTALKDPYHGGEG-DGE-GGRA----LTYRQLDEEIRSLGSGLATAGLLKGDKVTFIAENSHRWIITDQAIMLAGGISIPRGAAADLKEL 179 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig173894.4516.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig173894.4516.1 >prot_H-elongata_contig173894.4516.1 ID=prot_H-elongata_contig173894.4516.1|Name=mRNA_H-elongata_contig173894.4516.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=102bp MWDFLAIECGDQIAVVDPIHPALGTDGERGGKVTEARLSYSEIRASVRKMback to top mRNA from alignment at H-elongata_contig173894:341..1225- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig173894.4516.1 ID=mRNA_H-elongata_contig173894.4516.1|Name=mRNA_H-elongata_contig173894.4516.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=885bp|location=Sequence derived from alignment at H-elongata_contig173894:341..1225- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig173894:341..1225- >mRNA_H-elongata_contig173894.4516.1 ID=mRNA_H-elongata_contig173894.4516.1|Name=mRNA_H-elongata_contig173894.4516.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=612bp|location=Sequence derived from alignment at H-elongata_contig173894:341..1225- (Himanthalia elongata Himel1 dioecious)back to top |