prot_H-elongata_contig173738.4512.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig173738.4512.1
Unique Nameprot_H-elongata_contig173738.4512.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length87
Homology
BLAST of mRNA_H-elongata_contig173738.4512.1 vs. uniprot
Match: UPI001E1BDE4E (secreted RxLR effector protein 161-like n=1 Tax=Daphnia magna TaxID=35525 RepID=UPI001E1BDE4E)

HSP 1 Score: 85.5 bits (210), Expect = 2.740e-18
Identity = 38/66 (57.58%), Postives = 51/66 (77.27%), Query Frame = 0
Query:   19 GKALSKSDSPQTEEEVEEMCQIPYREIIGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWREAQK 84
            G  LS + SPQT++EVEEM QIPY+E +GAL++ +T TRPDIS+A  Q+AKFN NPG  HW+  ++
Sbjct:   14 GLKLSLNMSPQTDKEVEEMKQIPYKEAVGALLYLSTTTRPDISYAVGQVAKFNHNPGVQHWKAVKR 79          
BLAST of mRNA_H-elongata_contig173738.4512.1 vs. uniprot
Match: UPI001E1BB9B0 (secreted RxLR effector protein 161-like n=1 Tax=Daphnia magna TaxID=35525 RepID=UPI001E1BB9B0)

HSP 1 Score: 82.4 bits (202), Expect = 1.030e-17
Identity = 35/58 (60.34%), Postives = 47/58 (81.03%), Query Frame = 0
Query:   27 SPQTEEEVEEMCQIPYREIIGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWREAQK 84
            SPQT++EVEEM QIPY+E +GAL++ +T TRPDIS+A  Q+AKFN NPG  HW+  ++
Sbjct:    2 SPQTDKEVEEMKQIPYKEAVGALLYLSTTTRPDISYAVGQVAKFNHNPGVQHWKAVKR 59          
BLAST of mRNA_H-elongata_contig173738.4512.1 vs. uniprot
Match: UPI001E1BA9BB (uncharacterized protein LOC116922675 n=1 Tax=Daphnia magna TaxID=35525 RepID=UPI001E1BA9BB)

HSP 1 Score: 85.5 bits (210), Expect = 1.170e-17
Identity = 38/66 (57.58%), Postives = 51/66 (77.27%), Query Frame = 0
Query:   19 GKALSKSDSPQTEEEVEEMCQIPYREIIGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWREAQK 84
            G  LS + SPQT++EVEEM QIPY+E +GAL++ +T TRPDIS+A  Q+AKFN NPG  HW+  ++
Sbjct:  257 GLKLSLNMSPQTDKEVEEMKQIPYKEAVGALLYLSTTTRPDISYAVGQVAKFNHNPGVQHWKAVKR 322          
BLAST of mRNA_H-elongata_contig173738.4512.1 vs. uniprot
Match: E2LZP6_MONPE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Moniliophthora perniciosa (strain FA553 / isolate CP02) TaxID=554373 RepID=E2LZP6_MONPE)

HSP 1 Score: 85.1 bits (209), Expect = 2.140e-17
Identity = 42/86 (48.84%), Postives = 57/86 (66.28%), Query Frame = 0
Query:    3 KRFGVT--KTSIIPSVAGGKALSKSDSPQTEEEVEEMCQIPYREIIGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWREAQKAL 86
            + FG+T  K +  P +     LSKS SPQT +EVEEM +IPY   +G+L++ ATMTRPDI++ A  LA+FN NPG  HW+  +  L
Sbjct:  346 EEFGMTDCKPATTP-MTPNLILSKSQSPQTPDEVEEMSEIPYISAVGSLLYLATMTRPDIAYTASVLARFNSNPGMDHWKAVKHVL 430          
BLAST of mRNA_H-elongata_contig173738.4512.1 vs. uniprot
Match: A0A0J7N131_LASNI (Retrovirus-related pol polyprotein from transposon tnt 1-94 n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7N131_LASNI)

HSP 1 Score: 84.0 bits (206), Expect = 5.520e-17
Identity = 36/65 (55.38%), Postives = 49/65 (75.38%), Query Frame = 0
Query:   22 LSKSDSPQTEEEVEEMCQIPYREIIGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWREAQKAL 86
            L+K+ SPQ EEE +EM  IPYR ++G+LM+ AT TRPDI  A   L++FN+NPGP HW+ A++ L
Sbjct:  502 LTKAMSPQNEEEHKEMSNIPYRSLVGSLMYLATSTRPDIMHAVSLLSQFNENPGPNHWKAAKRVL 566          
BLAST of mRNA_H-elongata_contig173738.4512.1 vs. uniprot
Match: W4VRP9_9DIPT (Putative retrovirus-related pol polyprotein from transposon tnt (Fragment) n=2 Tax=Corethrella appendiculata TaxID=1370023 RepID=W4VRP9_9DIPT)

HSP 1 Score: 82.8 bits (203), Expect = 1.440e-16
Identity = 36/65 (55.38%), Postives = 47/65 (72.31%), Query Frame = 0
Query:   22 LSKSDSPQTEEEVEEMCQIPYREIIGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWREAQKAL 86
            LSK+D P T EE+ EM  +PYRE+IG LM+ +  TRPDISFA ++L++FN NPG  HW  A+  L
Sbjct: 1139 LSKADCPNTPEEIREMQNVPYREVIGCLMYLSQCTRPDISFAVNKLSQFNSNPGMKHWLAAKHLL 1203          
BLAST of mRNA_H-elongata_contig173738.4512.1 vs. uniprot
Match: M2QFN1_CERS8 (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ceriporiopsis subvermispora (strain B) TaxID=914234 RepID=M2QFN1_CERS8)

HSP 1 Score: 82.0 bits (201), Expect = 1.910e-16
Identity = 33/65 (50.77%), Postives = 49/65 (75.38%), Query Frame = 0
Query:   22 LSKSDSPQTEEEVEEMCQIPYREIIGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWREAQKAL 86
            L+K D P+  +E ++M + PYRE++GAL W + ++RPDISFA + LA+FN +PGP HWR A++ L
Sbjct:  150 LTKDDGPKNAQEADDMKRRPYRELLGALTWISVISRPDISFAVNNLAQFNADPGPKHWRAAKRIL 214          
BLAST of mRNA_H-elongata_contig173738.4512.1 vs. uniprot
Match: A0A4S4K4A0_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4K4A0_9AGAM)

HSP 1 Score: 79.0 bits (193), Expect = 2.610e-16
Identity = 36/82 (43.90%), Postives = 56/82 (68.29%), Query Frame = 0
Query:    3 KRFGVTK-TSIIPSVAGGKALSKSDSPQTEEEVEEMCQIPYREIIGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWREAQ 83
            +RF ++  T++   +  G  LSK+ +P+  EE+  M  +PYR+++GALM+ A  TRPDIS+A   LA+F+ NPGP HW+ A+
Sbjct:   60 ERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPGHWKAAK 141          
BLAST of mRNA_H-elongata_contig173738.4512.1 vs. uniprot
Match: A0A328L1I4_9BACI (Uncharacterized protein (Fragment) n=1 Tax=Bacillus sp. SRB_331 TaxID=1969379 RepID=A0A328L1I4_9BACI)

HSP 1 Score: 75.5 bits (184), Expect = 5.610e-16
Identity = 35/68 (51.47%), Postives = 43/68 (63.24%), Query Frame = 0
Query:   19 GKALSKSDSPQTEEEVEEMCQIPYREIIGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWREAQKAL 86
            G  L K+    T EE +EM + PYRE++GAL W AT TRPDIS A   L +F DNPG  HW  A++ L
Sbjct:   22 GLYLEKNMCATTAEEKQEMQETPYRELVGALNWIATCTRPDISHAVSSLCRFLDNPGRQHWTSAKRVL 89          
BLAST of mRNA_H-elongata_contig173738.4512.1 vs. uniprot
Match: A0A4Y2DWT0_ARAVE (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2DWT0_ARAVE)

HSP 1 Score: 80.9 bits (198), Expect = 5.720e-16
Identity = 41/95 (43.16%), Postives = 60/95 (63.16%), Query Frame = 0
Query:    1 MAKRFGVT---------KTSIIPSVAGGKALSKSDSPQTEEEVEEMCQIPYREIIGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWREAQKAL 86
            +A+RF +T         K+ ++P   G   LSK DSP T++EVEEMC +PYR+++G+L + A  TRPDI +A + L++F  NPG  HW+   K L
Sbjct:  220 VAERFNLTALDGVKALLKSVLVPIPKG--QLSKLDSPCTKQEVEEMCTLPYRDLLGSLAFIAGRTRPDIMYAVNLLSQFQSNPGIKHWQSLLKLL 312          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig173738.4512.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001E1BDE4E2.740e-1857.58secreted RxLR effector protein 161-like n=1 Tax=Da... [more]
UPI001E1BB9B01.030e-1760.34secreted RxLR effector protein 161-like n=1 Tax=Da... [more]
UPI001E1BA9BB1.170e-1757.58uncharacterized protein LOC116922675 n=1 Tax=Daphn... [more]
E2LZP6_MONPE2.140e-1748.84Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0J7N131_LASNI5.520e-1755.38Retrovirus-related pol polyprotein from transposon... [more]
W4VRP9_9DIPT1.440e-1655.38Putative retrovirus-related pol polyprotein from t... [more]
M2QFN1_CERS81.910e-1650.77Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4S4K4A0_9AGAM2.610e-1643.90Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A328L1I4_9BACI5.610e-1651.47Uncharacterized protein (Fragment) n=1 Tax=Bacillu... [more]
A0A4Y2DWT0_ARAVE5.720e-1643.16Retrovirus-related Pol polyprotein from transposon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig173738contigH-elongata_contig173738:1030..1290 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig173738.4512.1mRNA_H-elongata_contig173738.4512.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig173738 1003..1290 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig173738.4512.1 ID=prot_H-elongata_contig173738.4512.1|Name=mRNA_H-elongata_contig173738.4512.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=87bp
MAKRFGVTKTSIIPSVAGGKALSKSDSPQTEEEVEEMCQIPYREIIGALM
WAATMTRPDISFAAHQLAKFNDNPGPTHWREAQKAL*
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