prot_H-elongata_contig17363.4508.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig17363.4508.1
Unique Nameprot_H-elongata_contig17363.4508.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length911
Homology
BLAST of mRNA_H-elongata_contig17363.4508.1 vs. uniprot
Match: A0A6H5KA42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA42_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 7.250e-27
Identity = 275/918 (29.96%), Postives = 349/918 (38.02%), Query Frame = 0
Query:    6 AKLPGAVWVDRHELAEPCSLPLEVKAALAKVLAERILPCGSCDESENGRDHLLLMTFTSVDAKKTAVRNLAELGVDTTDFDSARRVQVEQVRAIPSPPSPLSLLKPEARAPPATTPESSTAVQAVRRDPVSRVVENAAKAEPAKEXXXXXXXXXXXXXXXXXXXXXXXRDKEVKVASTKAKXXXXXXXXXXXXXKAVLSKEAKKXXXXXXXXQATEMKAAPSVEVAKQAKVA---VKGALSKGTLCNRAKEAREKAREKALKGLQEERRIAAAAKAVVEAXXXXXXXXXXXXXXXXXSKAAGSDKARDPRQRNIGTKRPAAAPTPAPELKTTVQGAAKRARVEMSPASMAKEEPEPEAQASGQTGDSKPTMNFAKSGKDRPTTNAVRVQGIPEVPANDVQTISKTPMVPRPVXXXXXXXXXXXXXXMTAI-------------TVTPAAIAKQKEPKFAETSATRASLSPARQGRRTRSPVPQA---------VSRNVGTGQPVVRASP-----------------------------------------------------PGPRALSPTRRSTVRGEAWTTANSSSFGHAELVLPPLKALGKRLVVTLPSGPPDPTLQRWRYGFSGEYFKLQDRDPKTGEVLPSCDPSKNSSYAGVIPSTEMVLEGLREHVKQSRAIKAALAAGAIAVAGAPNLPASKKSTLPSSSKRVSGSGDSTYANDAETDAHAVREAPTT------------SGKMPPPSLAGNRAQIESSQRQLNTSEKSGHQSGREVKQGCSAVVVSSIAGAGVGVKQVEGRRKSRIREAEEELRSLQEVNIPRVMEALADVSKQRREIEAVATSVANKSAAARARLAQDSRDAAAALMEELRAKREAS----QRYLPRQQQESSRHIGNDSSGIDAGLE 829
            +KLPGAVWVDRHEL EP SLPLEVK  LAK LA +   C SCD++E GRD LLLMTF   + K  AV  LAELGV+T+ FD++ R+QVE  RA  +P                 +P                      K+  A  XXXXXXXXXXXXXXXXXXXX     +E                      KA+ + E ++         AT+ +AA +  V K A VA     G+ SKG    RA                       AAK    A                    +  D A          K PA A                 A+    P+   K +P   A                       +T A     +   P      +SKT       XXXXXXXXXXXXXX                 TVT +AIA       A+T       SP +  +R                  +    +  P VR S                                                      P P A  PT+ +        T +    G A  + PPL+A GKRLVV  P+G PDPT++ W Y  SGEYFKL +R P  G    +CDPS+N+SY GV+   E V+ G     +  R                                                                       +   P PS + + A +                   ++    +    ++  GA   V  V G   SRIREAEEELR+LQE  IPRVM+ALADVS+QRR++E+ A S+A KSAAA ARLAQDSRDAAAAL+ ELRA+RE S    Q+   +Q  +  +H    + G+ A LE
Sbjct:  908 SKLPGAVWVDRHELGEPYSLPLEVKPVLAKSLAAQTPTCASCDDNEAGRDFLLLMTFKCSEDKAVAVARLAELGVETSKFDNSPRIQVEHARASSAP-----------------SPXXXXXXXXXXXXXXXXXXXXXXKSGVAXXXXXXXXXXXXXXXXXXXXXXRVMLARE----------------------KALKALERERLIAAA----ATKARAAGAAXVGKSAAVAGGKPTGSKSKGVGAKRA-----------------------AAKTKTAASGAPRKTAAADGANKKSKSGSSVDAASAVGNARGQGKVPAKAKXXXXXXXXXXXXXXXXAKP---PSLPEKAKPAAAAVXXXXXXXXXXXXXXXXXXXXXASTEAPTPAVVENPPP--AAAVSKTKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATVTSSAIATAAAANGAKTP------SPTQPAKRLXXXXXXXXXXXXXXXXATATAASDVPAVRRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPSAPLPTKAAPAXXX-XRTVSPVRRGAAAGIPPPLRAFGKRLVVMRPTGQPDPTMRAWPYRLSGEYFKLLERGPNMG----ACDPSRNASYVGVVLPAEAVVAGFEAEREVRRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAQAAPVPSTSASTAAL------------------ADLPMALAGGAAATARGAKRPVT-VAGTWGSRIREAEEELRALQETKIPRVMKALADVSQQRRKLESTAASLAAKSAAASARLAQDSRDAAAALLAELRARREVSTQQRQKQASKQLHQRQQHGAGTAGGMPALLE 1724          
BLAST of mRNA_H-elongata_contig17363.4508.1 vs. uniprot
Match: D8LJV9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJV9_ECTSI)

HSP 1 Score: 121 bits (304), Expect = 2.210e-24
Identity = 60/97 (61.86%), Postives = 73/97 (75.26%), Query Frame = 0
Query:    6 AKLPGAVWVDRHELAEPCSLPLEVKAALAKVLAERILPCGSCDESENGRDHLLLMTFTSVDAKKTAVRNLAELGVDTTDFDSARRVQVEQVRAIPSP 102
            +KLPGAVWVDRHEL EP SLPLEVK+ LAK LA +   C SCD++E GRD LLLMTF   + K  AV  LAELGV+T+ F+++ R+QVE  RA P+P
Sbjct:  588 SKLPGAVWVDRHELGEPYSLPLEVKSVLAKSLAAQTPTCASCDDNEAGRDFLLLMTFECSEDKAVAVARLAELGVETSKFNNSPRIQVEHARASPTP 684          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17363.4508.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KA42_9PHAE7.250e-2729.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJV9_ECTSI2.210e-2461.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17363contigH-elongata_contig17363:3083..6613 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17363.4508.1mRNA_H-elongata_contig17363.4508.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig17363 2714..7342 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig17363.4508.1 ID=prot_H-elongata_contig17363.4508.1|Name=mRNA_H-elongata_contig17363.4508.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=911bp
MCSKVAKLPGAVWVDRHELAEPCSLPLEVKAALAKVLAERILPCGSCDES
ENGRDHLLLMTFTSVDAKKTAVRNLAELGVDTTDFDSARRVQVEQVRAIP
SPPSPLSLLKPEARAPPATTPESSTAVQAVRRDPVSRVVENAAKAEPAKE
AKAMPSKEAKATKAAPAKAANIARDKEVKVASTKAKVASTKAKVASTKEK
AVLSKEAKKASIKEKVAQATEMKAAPSVEVAKQAKVAVKGALSKGTLCNR
AKEAREKAREKALKGLQEERRIAAAAKAVVEAKAKAAAKARASVESKAFS
KAAGSDKARDPRQRNIGTKRPAAAPTPAPELKTTVQGAAKRARVEMSPAS
MAKEEPEPEAQASGQTGDSKPTMNFAKSGKDRPTTNAVRVQGIPEVPAND
VQTISKTPMVPRPVRPDAPESVKSATASMTAITVTPAAIAKQKEPKFAET
SATRASLSPARQGRRTRSPVPQAVSRNVGTGQPVVRASPPGPRALSPTRR
STVRGEAWTTANSSSFGHAELVLPPLKALGKRLVVTLPSGPPDPTLQRWR
YGFSGEYFKLQDRDPKTGEVLPSCDPSKNSSYAGVIPSTEMVLEGLREHV
KQSRAIKAALAAGAIAVAGAPNLPASKKSTLPSSSKRVSGSGDSTYANDA
ETDAHAVREAPTTSGKMPPPSLAGNRAQIESSQRQLNTSEKSGHQSGREV
KQGCSAVVVSSIAGAGVGVKQVEGRRKSRIREAEEELRSLQEVNIPRVME
ALADVSKQRREIEAVATSVANKSAAARARLAQDSRDAAAALMEELRAKRE
ASQRYLPRQQQESSRHIGNDSSGIDAGLEESSLRLALRPALAKPSLGDSG
SDITAAARTNTSQIHILTGSTKSGRSGCTERSSKVANGLVQPEAASSVAA
VDASSRAGHG*
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