mRNA_H-elongata_contig17357.4505.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig17357.4505.1 vs. uniprot
Match: D7G774_ECTSI (Similar to TAK1 (TGF-beta-activated kinase) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G774_ECTSI) HSP 1 Score: 385 bits (990), Expect = 7.040e-129 Identity = 185/269 (68.77%), Postives = 213/269 (79.18%), Query Frame = 1
Query: 7 MLDGPTRYLGQGYWRDVRLATYNGQQVAVKTLKMTQDETRRNMERHRWEAVALDAVKNHPNIVHILGLCDCDMVTEYFPIYMDDLLMNGPADDP----IPDNEVIRMALDAARGLQALHEVPEGPVVHADLQPRQLLLDEDGVVKLNDLNRCRFMGRDAEGNPCPFRINKGNGVWRSPEEFAGEPQTEKLDIYSMGMIFWSMFGRQAPFERDDHQRYKDLVLAGVRPFLKPSWHQGFVQLFQDMWAGDPMERPTAAEVVQRLEEMLTEL 801
ML+G T +LG+GYWR+VRLATY GQ VA+KTL+ Q+ET RN ERHRWEAVALD V +HPNIVH+LGLC+CDM+TEYFP YMD LLM + + E+IRMAL AARG+QALHE+P GPVVHADLQPRQLLLDE+GVVK+NDLNRCRFM RD+ G PCPF I+KGNGVWRSPEE+AGE TEKLDIYS+G IFW+M GR+ PF+RDD +YK VL G RP + PSWH FVQLF DMW DP ERP A EVV RLE M +L
Sbjct: 1 MLEGKTEFLGKGYWREVRLATYQGQDVAIKTLRDDQEETDRNKERHRWEAVALDLVSDHPNIVHLLGLCECDMITEYFPYYMDVLLMGDDSSSEELVELSIGEIIRMALQAARGIQALHEMPGGPVVHADLQPRQLLLDENGVVKVNDLNRCRFMARDSSGEPCPFYISKGNGVWRSPEEYAGEGLTEKLDIYSLGNIFWAMLGRKPPFKRDD--KYKARVLRGERPKVDPSWHPEFVQLFTDMWKRDPRERPNAREVVLRLEMMYAQL 267
BLAST of mRNA_H-elongata_contig17357.4505.1 vs. uniprot
Match: A0A6H5JFK2_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFK2_9PHAE) HSP 1 Score: 387 bits (994), Expect = 1.340e-127 Identity = 186/271 (68.63%), Postives = 213/271 (78.60%), Query Frame = 1
Query: 1 QDMLDGPTRYLGQGYWRDVRLATYNGQQVAVKTLKMTQDETRRNMERHRWEAVALDAVKNHPNIVHILGLCDCDMVTEYFPIYMDDLLMNGPADDP----IPDNEVIRMALDAARGLQALHEVPEGPVVHADLQPRQLLLDEDGVVKLNDLNRCRFMGRDAEGNPCPFRINKGNGVWRSPEEFAGEPQTEKLDIYSMGMIFWSMFGRQAPFERDDHQRYKDLVLAGVRPFLKPSWHQGFVQLFQDMWAGDPMERPTAAEVVQRLEEMLTEL 801
++ML+G T +LG+GYWR+VRLATY GQ VA+K L+ Q+ET RN ERHRWEAVALD V +HPNIVH+LGLCDCDM+TEYFP YMD LLM + + E+IRMAL AARG+QALHE+P GPVVHADLQPRQLLLD++GVVK+NDLNRCRFM RD+ G PCPF I+KGNGVWRSPEE+AGE TEKLDIYS+G IFW+M GR+ PF RDD YK VL G RP + PSWH FVQLF DMW DP ERPTA EVV RLE M EL
Sbjct: 125 EEMLEGKTAFLGKGYWREVRLATYQGQDVAIKMLREDQEETDRNRERHRWEAVALDMVSDHPNIVHLLGLCDCDMITEYFPYYMDVLLMGDDSSSEELVELSIGEIIRMALQAARGIQALHEMPGGPVVHADLQPRQLLLDDNGVVKVNDLNRCRFMARDSSGEPCPFYISKGNGVWRSPEEYAGEGLTEKLDIYSLGNIFWAMLGRKPPFVRDDD--YKGKVLRGERPKVNPSWHPEFVQLFTDMWKRDPRERPTAREVVLRLEAMYAEL 393
BLAST of mRNA_H-elongata_contig17357.4505.1 vs. uniprot
Match: A0A6H5J7B7_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7B7_9PHAE) HSP 1 Score: 251 bits (641), Expect = 2.180e-73 Identity = 125/265 (47.17%), Postives = 170/265 (64.15%), Query Frame = 1
Query: 1 QDMLDGPTRYLGQGYWRDVRLATYNGQQVAVKTLK--MTQDETRRNMER-HRWEAVALDAVKNHPNIVHILGLCDCDMVTEYFPIYMDDLLMNGPADDPIPDNEVIRMALDAARGLQALHEVPEGPVVHADLQPRQLLLDEDGVVKLNDLNRCRFMGRDAEGNPCPFRINKGN-GVWRSPEEFAGEPQTEKLDIYSMGMIFWSMFGRQAPFERDDHQRYKDLVLAGVRPFLKPSWHQGFVQLFQDMWAGDPMERPTAAEVVQRLE 783
++M++G +G G RDV L G+ + VK L+ Q TR +ER HRWEA A+DAV+ HPN+V +LG+C V+EYFP+ +DDL++ A PIP V+ MALDAARGLQALHE P G ++H D++P+QL++D+ G +K+NDLN C F DA+GN CP+ + G WRSPE AGE EKLDIYS+ M+F+SM P+ + ++ G+ P PSWH GF+ + +DMW DP RP+A VVQRLE
Sbjct: 244 EEMMEGKKTLIGNGNIRDVYLVERGGRNLVVKYLREDFEQRATRTRVERIHRWEAAAIDAVRGHPNVVDMLGICGPSSVSEYFPVRLDDLVLKAGA-QPIPILTVVSMALDAARGLQALHEAPGGTIIHFDMKPQQLMVDDQGRLKINDLNMCSFPDTDADGNTCPYESSASRVGPWRSPENIAGEKLNEKLDIYSLAMVFYSMLALHPPYLNVPNATGN--IMEGIPPPTDPSWHPGFLDIVRDMWQRDPNARPSARRVVQRLE 505
BLAST of mRNA_H-elongata_contig17357.4505.1 vs. uniprot
Match: D8LI06_ECTSI (Similar to TAK1 (TGF-beta-activated kinase) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI06_ECTSI) HSP 1 Score: 229 bits (583), Expect = 2.470e-67 Identity = 119/263 (45.25%), Postives = 172/263 (65.40%), Query Frame = 1
Query: 7 MLDGPTRYLGQGYWRDVRLATYNGQQVAVKTLKMTQD--ETRRNMER-HRWEAVALDAVKNHPNIVHILGLCDCDMVTEYFPIYMDDLLMNGPADDPIPDNEVIRMALDAARGLQALHEVPEGPVVHADLQPRQLLLDEDGVVKLNDLNRCRFMGRDAEGNPCPFRINK-GNGVWRSPEEFAGEPQTEKLDIYSMGMIFWSMFGRQAPFERDDHQRYKDLVLAGVRPFLKPSWHQGFVQLFQDMWAGDPMERPTAAEVVQRLE 783
ML + +G RDV L + G+++ VK L+ + +RR +++ HR EA ALD V+ HPNIV ++GLC+ V+E+ P +DDL++ A P+P V+ MALDAARGLQALHE P G +VH+D++P+QL+LDE G VK+NDL+ CRF D EGN CP+ +G +RSPE AGEP +EK+D+YS+ M F++M + P++ + R + +LAG+ P + SW + FV++ DMW DP RP+A VV+RLE
Sbjct: 1 MLADEKKLIGNRKIRDVYLVEWGGRKLVVKALREDFELKASRRRVDKIHRREAAALDEVRGHPNIVDMVGLCESSSVSEFVPGSLDDLVLKDGA-KPLPIALVVSMALDAARGLQALHEAPGGAIVHSDIKPQQLMLDEYGRVKINDLSMCRFPPADVEGNTCPYPARACKSGPFRSPENIAGEPLSEKIDVYSLAMTFYTMLALKPPYKGEPGARAR--ILAGIPPSVNLSWDRDFVEILGDMWQRDPKARPSARRVVERLE 260
BLAST of mRNA_H-elongata_contig17357.4505.1 vs. uniprot
Match: D7G7W7_ECTSI (Similar to TAK1 (TGF-beta-activated kinase) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7W7_ECTSI) HSP 1 Score: 213 bits (542), Expect = 1.940e-61 Identity = 119/273 (43.59%), Postives = 165/273 (60.44%), Query Frame = 1
Query: 1 QDMLDGPTRYLGQGYWRDVRLATYNGQQVAVKTLKMTQDET--RRNMERHRWEAVALDAVKNHPNIVHILGLCDCDMVTEYFPIYMDDLLMNGPADDPIPDNEVIRMALDAARGLQALHEVPEGPVVHADLQPRQLLLDEDGVVKLNDLNRCRFMG--RDAEGNPCPFRINKGN--GVWRSPEEFAGEPQTEKLDIYSMGMIFWSMFGRQAPFERDDHQRYKDLVLAGVRPFLKPSWHQGFVQLFQDMWAGDPMERPTAAEVVQRLEEMLTEL 801
Q+ML G T +G G RDV L Y G++VA+KTL+ D R ++E+H+ E + LDA++ H NIV +LGLCD +VTEY+ + G + +PD V+ MALDAARGLQALHE +H DL+P+QLL+D+DG V LND N M + +G CP + K N W SPE +AGEP T DIYS+ MIF+S+ P+E + + + G RP + PSWH+GF+++ QDMW P +RP+A VV RL+ + E+
Sbjct: 21 QNMLAGNTTLVGNGRVRDVYLVEYEGRKVALKTLRNMDDSRSQRVHLEKHKREILTLDAMRGHRNIVGMLGLCDTMVVTEYYTTSFLRAIFRGRME--LPDLAVVSMALDAARGLQALHETAGS--IHVDLKPQQLLIDDDGRVMLNDFNSAHIMSISQAGDGTACPAQSTKRNLPTPWPSPENYAGEPLTPASDIYSLAMIFFSLMAASLPYEGNPELLARAMSRQG-RPEIDPSWHKGFMKVVQDMWHQTPQKRPSAKRVVVRLQLLQAEI 288
BLAST of mRNA_H-elongata_contig17357.4505.1 vs. uniprot
Match: D8LHZ9_ECTSI (Serine/threonine-protein kinase pkn5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHZ9_ECTSI) HSP 1 Score: 208 bits (530), Expect = 9.970e-61 Identity = 101/207 (48.79%), Postives = 135/207 (65.22%), Query Frame = 1
Query: 172 VKNHPNIVHILGLCDCDMVTEYFPIYMDDLLMNGPADDPIPDNEVIRMALDAARGLQALHEVPEGPVVHADLQPRQLLLDEDGVVKLNDLNRCRFMGRDAEGNPCPFRINKGN-GVWRSPEEFAGEPQTEKLDIYSMGMIFWSMFGRQAPFE--RDDHQRYKDLVLAGVRPFLKPSWHQGFVQLFQDMWAGDPMERPTAAEVVQRLE 783
V+ HPN+V ++G+C V+EYF + +DDL++ A P+P V+ MALDAARGLQALHE P G +VH D++P+QL++D+ G +K+NDLN C F DA+GN CP+ G WRSPE AGE EKLDIYS+ M+F+SM P++ R+ KD G+ P PSWH GF+ + +DMW DP RP+A VVQRLE
Sbjct: 5 VRGHPNVVDLVGICGPSSVSEYFAVRLDDLVLKAGA-QPLPILTVVSMALDAARGLQALHEAPGGAIVHFDMKPQQLMVDDQGRLKINDLNMCSFTDADADGNTCPYESTASRVGPWRSPENIAGENLNEKLDIYSLAMVFYSMLALHPPYQGVRNASGNIKD----GIPPPTDPSWHPGFLDIVRDMWQRDPNARPSARRVVQRLE 206
BLAST of mRNA_H-elongata_contig17357.4505.1 vs. uniprot
Match: D7FNX1_ECTSI (Serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX1_ECTSI) HSP 1 Score: 204 bits (519), Expect = 3.270e-57 Identity = 112/272 (41.18%), Postives = 163/272 (59.93%), Query Frame = 1
Query: 7 MLDGPTRYLGQGYWRDVRLATYNGQQVAVKTLKMTQDETRR---NMERHRWEAVALDAVKNHPNIVHILGLCDCDMVTEYFPIYMDDLLMNGPADDPIPDNEVIRMALDAARGLQALHEVPEGPVVHADLQPRQLLLDEDGVVKLNDLNRCRFMGRDA--EGNPCPFRINKGNGV--WRSPEEFAGEPQTEKLDIYSMGMIFWSMFGRQAPFERDDHQRYKDLVLAGVRPFLKPSWHQGFVQLFQDMWAGDPMERPTAAEVVQRLEEMLTEL 801
ML G +G G R V + Y G+ V VKTL+ +E RR ++E HR E++ L+A++ HPN+V +LG C+ +VTEY P + + + V+ +ALD A+G+QALHE+ +H D++P+QLL+D+ G K+ND N M DA +G CP + + WR+PE AG+P TEK+DIY+MGMI++S+ PF D + + + A RP + PSWH+GFV++ QDMW DP ERP A +VVQRL+ + EL
Sbjct: 100 MLSGEMTLIGTGRVRTVHMVEYEGEAVVVKTLQHV-EELRRLKAHLEMHRVESLTLEALRGHPNVVGMLGFCNTTVVTEYHPDNFLHTIFRKK--EKLSLRRVVSLALDVAQGMQALHEI--AGAIHLDMKPQQLLIDDAGRGKVNDFNSVHLMSADASADGKHCPILTGRPARLVPWRAPENIAGKPVTEKVDIYAMGMIYYSLVSGGLPFP--DVETFDEARAAHERPEIDPSWHKGFVEIIQDMWHEDPDERPFARQVVQRLQALQDEL 364
BLAST of mRNA_H-elongata_contig17357.4505.1 vs. uniprot
Match: A0A6H5K7R0_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7R0_9PHAE) HSP 1 Score: 204 bits (520), Expect = 1.690e-56 Identity = 115/273 (42.12%), Postives = 161/273 (58.97%), Query Frame = 1
Query: 1 QDMLDGPTRYLGQGYWRDVRLATYNGQQVAVKTLKMTQDETRRNME--RHRWEAVALDAVKNHPNIVHILGLCDCDMVTEYFPIYMDDLLMNGPADDPIPDNEVIRMALDAARGLQALHEVPEGPVVHADLQPRQLLLDEDGVVKLNDLNRCRFMG--RDAEGNPCPFRINKGN--GVWRSPEEFAGEPQTEKLDIYSMGMIFWSMFGRQAPFERDDHQRYKDLVLAGVRPFLKPSWHQGFVQLFQDMWAGDPMERPTAAEVVQRLEEMLTEL 801
Q ML G +G G RDV L Y G++VA+KTL+ D + + +H+ E + LDA++ H NIV +LG CD +VTEY+ + G + +PD V+ MALDAARGLQALHE+ +H DL+P+QLL+D+DG V LND N M + +G CP + K N W SPE +AGEP T DIYS+ MIF+S+ P+E + + + + G RP + PSWH+GF+++ QDMW P RP+A VV RL+ + E+
Sbjct: 163 QRMLAGNKTLVGNGRVRDVYLVEYEGRKVALKTLRNMDDGRSKKVHLMKHKREILTLDAMRGHRNIVGMLGFCDTMVVTEYYTTSFLRAIFRGRIE--LPDLAVVSMALDAARGLQALHEIASS--IHVDLKPQQLLMDDDGRVMLNDFNSALLMSVSQAGDGTACPAQSAKRNLPTPWPSPENYAGEPLTPANDIYSLAMIFYSLMAGSLPYEGNPERLARAMSSQG-RPEIDPSWHKGFMKVVQDMWNQTPQRRPSAERVVVRLQLVQAEI 430
BLAST of mRNA_H-elongata_contig17357.4505.1 vs. uniprot
Match: D8LN73_ECTSI (Serine/threonine/tyrosine kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN73_ECTSI) HSP 1 Score: 198 bits (503), Expect = 5.460e-56 Identity = 106/257 (41.25%), Postives = 154/257 (59.92%), Query Frame = 1
Query: 31 LGQGYWRDVRLATYNGQQVAVKTLKMTQDETRRN---MERHRWEAVALDAVKNHPNIVHILGLCDCDMVTEYFPIYMDDLLMNGPADDPIPDNEVIRMALDAARGLQALHEVPEGPVVHADLQPRQLLLDEDGVVKLNDLNRCRFMGRDAEGNPCPFRINKGNGV----WRSPEEFAGEPQTEKLDIYSMGMIFWSMFGRQAPFERDDHQRYKDLVLAGVRPFLKPSWHQGFVQLFQDMWAGDPMERPTAAEVVQRL 780
L G RDV L Y GQ + VKTL+ DE R+ + H+ E + +DA+K HPNIV +LG+C +VT++F + A P+P +V+ +AL AA+GLQALHE+ G +H D++P+QLL+D+DG +ND N + MGR + ++ G WR PE +AG+P TEK DIYSMGMIF+S+ + P+ D + + V G +P + PSWH+GF+++ + MW DP RP+A +VV RL
Sbjct: 9 LASGLVRDVYLVEYEGQALVVKTLRNV-DELRKQKLYLTMHKREVLTMDALKGHPNIVEMLGVCGTTVVTKFFKEDFKGSIRRRGA--PMPIRQVVSLALGAAKGLQALHEIVGG--IHFDMKPQQLLIDDDGTAVINDFNALKLMGRSPGPDEAFCAVHGGTPAQLITWRPPENYAGKPLTEKADIYSMGMIFYSVIAGRNPY--DTPEALQTAVSHGSKPEVDPSWHRGFMEVVEQMWLDDPERRPSARQVVTRL 258
BLAST of mRNA_H-elongata_contig17357.4505.1 vs. uniprot
Match: D7FYC9_ECTSI (Similar to TAK1 (TGF-beta-activated kinase) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYC9_ECTSI) HSP 1 Score: 201 bits (510), Expect = 8.990e-56 Identity = 115/267 (43.07%), Postives = 156/267 (58.43%), Query Frame = 1
Query: 7 MLDGPTRYLGQGYWRDVRLATYNGQQVAVKTLKMTQDETRRNMERHRW-----EAVALDAVKNHPNIVHILGLCDCDMVTEYFPIYMDDLLMNGPADDPIPDNEVIRMALDAARGLQALHEVPEGPVVHADLQPRQLLLDEDGVVKLNDLNRCRFMG-RDAEGNPCPFRINKGNGV--WRSPEEFAGEPQTEKLDIYSMGMIFWSMFGRQAPFERDDHQRYKDLVLAGVRPFLKPSWHQGFVQLFQDMWAGDPMERPTAAEVVQRLE 783
ML+G +G G RDV L Y GQ V VK+L+ D N+E+HR E + LDA++ + NIV +LG+C +VTEYFP + + + + + + V+ M+LDAARGLQALHEV VH DL+P QLL+D++ V +ND N MG +G CP R K N + W SPE +AG+P TE DIYSM M+F+S+ PF + RP + PSWH+G+VQ+ QDMW DPM RP+A ++V RLE
Sbjct: 111 MLEGKKTLVGSGSVRDVFLVEYEGQTVVVKSLRRKDDP---NVEKHRLVMHKLEVLTLDALRGNRNIVGMLGVCGTTVVTEYFPTNV--VYYAFQSRERLSIHAVVSMSLDAARGLQALHEVG---CVHVDLKPMQLLVDDNRRVMVNDFNSVHVMGISPTDGAFCPVRAKKRNRLEAWPSPENYAGQPLTETSDIYSMAMVFYSLLSGTPPFGGPEGLAEAFATRTQPRPLVDPSWHRGYVQIVQDMWNEDPMRRPSARQIVARLE 369 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17357.4505.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig17357.4505.1 >prot_H-elongata_contig17357.4505.1 ID=prot_H-elongata_contig17357.4505.1|Name=mRNA_H-elongata_contig17357.4505.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=285bp MLDGPTRYLGQGYWRDVRLATYNGQQVAVKTLKMTQDETRRNMERHRWEAback to top mRNA from alignment at H-elongata_contig17357:3319..5579- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig17357.4505.1 ID=mRNA_H-elongata_contig17357.4505.1|Name=mRNA_H-elongata_contig17357.4505.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2261bp|location=Sequence derived from alignment at H-elongata_contig17357:3319..5579- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig17357:3319..5579- >mRNA_H-elongata_contig17357.4505.1 ID=mRNA_H-elongata_contig17357.4505.1|Name=mRNA_H-elongata_contig17357.4505.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1710bp|location=Sequence derived from alignment at H-elongata_contig17357:3319..5579- (Himanthalia elongata Himel1 dioecious)back to top |