prot_H-elongata_contig173535.4504.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig173535.4504.1
Unique Nameprot_H-elongata_contig173535.4504.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length93
Homology
BLAST of mRNA_H-elongata_contig173535.4504.1 vs. uniprot
Match: D7G038_ECTSI (Integral membrane protein-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G038_ECTSI)

HSP 1 Score: 130 bits (326), Expect = 1.600e-35
Identity = 59/92 (64.13%), Postives = 75/92 (81.52%), Query Frame = 0
Query:    2 ICTQFATLTLLEEGKTLEDVRCKLSRDLKPTLMNASWFWPMVSVTNTLFVPVINRPAASSFAGLFWNMYLSYQANHNGVEMGEVSEVFAVKE 93
            +  QFA+LTLLEEGKT+ DVR KLSRD  PTL NA  FWP+VSV N+ FVPV++RP  SSF G+FWN+Y+SYQANHNG+E+GE+S V+  ++
Sbjct:   66 LAAQFASLTLLEEGKTMGDVRTKLSRDFTPTLKNAILFWPVVSVINSAFVPVLSRPVFSSFVGVFWNVYISYQANHNGMEVGELSVVYPTEQ 157          
BLAST of mRNA_H-elongata_contig173535.4504.1 vs. uniprot
Match: A0A6H5JW72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW72_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 3.600e-35
Identity = 59/92 (64.13%), Postives = 75/92 (81.52%), Query Frame = 0
Query:    2 ICTQFATLTLLEEGKTLEDVRCKLSRDLKPTLMNASWFWPMVSVTNTLFVPVINRPAASSFAGLFWNMYLSYQANHNGVEMGEVSEVFAVKE 93
            +  QFA+LTLLEEGKT+ DVR KLSRD  PTL NA  FWP+VSV N+ FVPV++RP  SSF G+FWN+Y+SYQANHNG+E+GE+S V+  ++
Sbjct:  110 LAAQFASLTLLEEGKTMGDVRTKLSRDFTPTLKNAILFWPVVSVINSTFVPVLSRPVFSSFVGVFWNVYISYQANHNGMEVGELSVVYPAEQ 201          
BLAST of mRNA_H-elongata_contig173535.4504.1 vs. uniprot
Match: A0A835ZBN1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBN1_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 3.760e-15
Identity = 38/77 (49.35%), Postives = 52/77 (67.53%), Query Frame = 0
Query:    2 ICTQFATLTLLEEGKTLEDVRCKLSRDLKPTLMNASWFWPMVSVTNTLFVPVINRPAASSFAGLFWNMYLSYQANHN 78
            I  QFA++TL+E GK  + V  K+ +DL  T    + +WP V + N+ FVPV NRP   SFAGLFWN+YLS++AN +
Sbjct:  106 ISIQFASMTLME-GKGWDAVDRKIRQDLLETTAAGACYWPFVGLLNSRFVPVTNRPVVGSFAGLFWNIYLSHKANES 181          
BLAST of mRNA_H-elongata_contig173535.4504.1 vs. uniprot
Match: UPI001455C596 (protein Mpv17-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI001455C596)

HSP 1 Score: 60.1 bits (144), Expect = 6.180e-9
Identity = 29/73 (39.73%), Postives = 42/73 (57.53%), Query Frame = 0
Query:    4 TQFATLTLLEEGKTLEDVRCKLSRDLKPTLMNASWFWPMVSVTNTLFVPVINRPAASSFAGLFWNMYLSYQAN 76
            T F +   L  G ++++VR KL +D K TL+     WP V + N  FVP+ +R  A +   +FWN YLS+ AN
Sbjct:  103 TTFFSYIGLTSGLSIQNVRDKLKKDFKTTLLTNYKVWPAVQLVNFYFVPLQHRVLAVNLVAVFWNTYLSWMAN 175          
BLAST of mRNA_H-elongata_contig173535.4504.1 vs. uniprot
Match: A0A813WUK2_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A813WUK2_9BILA)

HSP 1 Score: 58.9 bits (141), Expect = 2.680e-8
Identity = 29/81 (35.80%), Postives = 49/81 (60.49%), Query Frame = 0
Query:    2 ICTQFATLTLLEEGKTLEDVRCKLSRDLKPTLMNASWFWPMVSVTNTLFVPVINRPAASSFAGLFWNMYLSYQANH-NGVE 81
            I   F ++ LL+ G++ E+++ K+   +  T +  + +WP VS  N  ++P+  RP   +FAG+FWN+Y+S  AN  N VE
Sbjct:  120 ISLAFTSIGLLK-GQSFEEIKLKIVHHMPQTFLLGNCYWPFVSFINFRYIPLNYRPFLGTFAGMFWNIYVSTIANKDNDVE 199          
BLAST of mRNA_H-elongata_contig173535.4504.1 vs. uniprot
Match: UPI0014254F9B (protein Mpv17-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014254F9B)

HSP 1 Score: 50.1 bits (118), Expect = 2.710e-5
Identity = 23/62 (37.10%), Postives = 35/62 (56.45%), Query Frame = 0
Query:   15 GKTLEDVRCKLSRDLKPTLMNASWFWPMVSVTNTLFVPVINRPAASSFAGLFWNMYLSYQAN 76
            G    +V+ KL +D K TL+     WP V + N  FVP+ +R   ++   + WN YLS++AN
Sbjct:  113 GMNTTEVKEKLKKDYKSTLLVNWTVWPFVQICNFYFVPLQHRVITANSVAVVWNTYLSWKAN 174          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig173535.4504.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G038_ECTSI1.600e-3564.13Integral membrane protein-like protein n=1 Tax=Ect... [more]
A0A6H5JW72_9PHAE3.600e-3564.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZBN1_9STRA3.760e-1549.35Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
UPI001455C5966.180e-939.73protein Mpv17-like n=1 Tax=Asterias rubens TaxID=7... [more]
A0A813WUK2_9BILA2.680e-835.80Hypothetical protein n=1 Tax=Didymodactylos carnos... [more]
UPI0014254F9B2.710e-537.10protein Mpv17-like n=1 Tax=Anneissia japonica TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007248Mpv17/PMP22PFAMPF04117Mpv17_PMP22coord: 12..72
e-value: 4.1E-15
score: 55.7
IPR007248Mpv17/PMP22PANTHERPTHR11266PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17coord: 6..79
NoneNo IPR availablePANTHERPTHR11266:SF17PROTEIN MPV17coord: 6..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig173535contigH-elongata_contig173535:1026..1304 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig173535.4504.1mRNA_H-elongata_contig173535.4504.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig173535 1026..1304 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig173535.4504.1 ID=prot_H-elongata_contig173535.4504.1|Name=mRNA_H-elongata_contig173535.4504.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=93bp
QICTQFATLTLLEEGKTLEDVRCKLSRDLKPTLMNASWFWPMVSVTNTLF
VPVINRPAASSFAGLFWNMYLSYQANHNGVEMGEVSEVFAVKE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007248Mpv17_PMP22