mRNA_H-elongata_contig173504.4502.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig173504.4502.1
Unique NamemRNA_H-elongata_contig173504.4502.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig173504.4502.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK)

HSP 1 Score: 159 bits (403), Expect = 1.710e-41
Identity = 90/210 (42.86%), Postives = 128/210 (60.95%), Query Frame = 1
Query:    4 KAIAREMDGQTTRGVWQVVERPKGKTVLGTRVVFKRKIGKDGKIEKYKCRFVAQGFKQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEIYIELPEGYRDSRKQVGLLKKVMYGLVHAGLLWSKKFGTELEAKGFPRSQADPCVFRRVLHGKVVVVIVVYVDDLLVASATKRDEAQAVRDLCSCFPIKDLG 633
            KA   E++     GV++ V RP+ + ++G++ VFK K G DG++EKYK R VAQGF QV+GI Y E+ +P     SIR++L++ A   WE  Q+DV  A+L  ++EEEIY+++P G++ S   V  LKK +YGL  A   W KK   EL+  GF R QAD CVF + +  +   +I VYVDD +V S +     +   DL S F + DLG
Sbjct: 1012 KACEAELEMFKQLGVFEEVPRPRDRKIIGSKWVFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIRLLLALAARHDWEIHQMDVKSAFLNGELEEEIYMKVPPGHKASADAVWRLKKALYGLKQASREWYKKLSAELKTLGFTRLQADHCVFYKNMD-RHPPIIAVYVDDNMVLSDSLDLVTKTKSDLGSRFDMTDLG 1220          
BLAST of mRNA_H-elongata_contig173504.4502.1 vs. uniprot
Match: A0A401GXA0_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GXA0_9APHY)

HSP 1 Score: 146 bits (368), Expect = 3.000e-40
Identity = 75/197 (38.07%), Postives = 119/197 (60.41%), Query Frame = 1
Query:   43 GVWQVVERPKGKTVLGTRVVFKRKIGKDGKIEKYKCRFVAQGFKQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEIYIELPEGYRDSRKQVGLLKKVMYGLVHAGLLWSKKFGTELEAKGFPRSQADPCVFRRVLHGKVVVVIVVYVDDLLVASATKRDEAQAVRDLCSCFPIKDLG 633
            G W++ + PK +  +G + VF++K  K+G++ KYK R VAQG+ Q+ G+ + E+ +P     SIR +L++     WE  Q+DV  AYL  D++EEIY+  PEG+ D    V  L K +YGL  +G  W++K   +L   G+ + +ADPCV+ +   G+V + I V+VDDLL+ + + +   +  RDL   F + DLG
Sbjct:    2 GTWELQDLPKDRNAVGCKWVFQKKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVHLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFNDGSGHVCRLHKTLYGLKQSGHKWNRKLHRKLTELGYKQLEADPCVYLQEQKGEVQI-ITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLG 197          
BLAST of mRNA_H-elongata_contig173504.4502.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY)

HSP 1 Score: 154 bits (390), Expect = 9.440e-40
Identity = 81/211 (38.39%), Postives = 124/211 (58.77%), Query Frame = 1
Query:    1 EKAIAREMDGQTTRGVWQVVERPKGKTVLGTRVVFKRKIGKDGKIEKYKCRFVAQGFKQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEIYIELPEGYRDSRKQVGLLKKVMYGLVHAGLLWSKKFGTELEAKGFPRSQADPCVFRRVLHGKVVVVIVVYVDDLLVASATKRDEAQAVRDLCSCFPIKDLG 633
            EKA+  E D     G W++ + PK +  +G + VF+RK  K+G++ KYK R VAQG+ Q+ G+ + E+ +P     SIR +L++     WE  Q+DV  AYL  D++EEIY+  PEG+ D   ++  L+K +YGL  +G  W++K   EL   G+ R +ADPCV+        V +I V+VDDLL+ + + +   +  RDL   F + DLG
Sbjct:  923 EKAVKAEYDQLQGMGTWELQDLPKDRNAVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRICRLRKTLYGLKQSGREWNRKLHRELTELGYKRLEADPCVYLWERKEGEVQIITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLG 1133          
BLAST of mRNA_H-elongata_contig173504.4502.1 vs. uniprot
Match: UPI001C988E4D (hypothetical protein n=3 Tax=Bacteria TaxID=2 RepID=UPI001C988E4D)

HSP 1 Score: 147 bits (372), Expect = 1.290e-39
Identity = 80/213 (37.56%), Postives = 132/213 (61.97%), Query Frame = 1
Query:    1 EKAIAREMDGQTTRGVWQVVERPKGKTVLGTRVVFKRKIGKDGKIEKYKCRFVAQGFKQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEIYIELPEGYRDSRK--QVGLLKKVMYGLVHAGLLWSKKFGTELEAKGFPRSQADPCVFRRVLHGKVVVVIVVYVDDLLVASATKRDEAQAVRDLCSCFPIKDLG 633
            ++A+  EMD   + GVW +V+ P+G   +G + ++KRKIG DGK+E YK R VA+G+ Q +G+ YEE+ SP     SIR++L++ A   +E  Q+DV  A+L  ++EE++Y+E P+G+  S +  +V  LK+ +YGL  A   W+ +F   +++ GF ++  +PCV+++   G  V  +V+YVDD+L+        +     L S F +KDLG
Sbjct:  105 QEAMKSEMDSMYSNGVWTLVDPPEGIVPIGCKWIYKRKIGSDGKVETYKARLVAKGYNQKQGVDYEETFSPVAMLKSIRILLAIAAYYDYEICQMDVKTAFLNGNIEEDLYMEQPKGFISSGEDHKVCKLKRSIYGLKQASRSWNIRFNEAVKSFGFIQNMDEPCVYKKD-SGSAVTFLVLYVDDILIIGNDTGMISSVKLWLSSNFSMKDLG 316          
BLAST of mRNA_H-elongata_contig173504.4502.1 vs. uniprot
Match: A0A151RGT1_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151RGT1_CAJCA)

HSP 1 Score: 144 bits (363), Expect = 3.490e-39
Identity = 74/212 (34.91%), Postives = 126/212 (59.43%), Query Frame = 1
Query:    4 KAIAREMDGQTTRGVWQVVERPKGKTVLGTRVVFKRKIGKDGKIEKYKCRFVAQGFKQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEIYIELPEGYR--DSRKQVGLLKKVMYGLVHAGLLWSKKFGTELEAKGFPRSQADPCVFRRVLHGKVVVVIVVYVDDLLVASATKRDEAQAVRDLCSCFPIKDLG 633
            +A+  EM+       W++V++P+ K  +G R +F  K   DG IE+YK R VA+G+ Q  GI Y+E+ +P     ++R+VL++ A  GW+  QLDV  A+L  ++EEE+Y+E+P+G++  + R +V LLKK +YGL  +   W  +F  E+ +  + +SQ D  +F +        ++ VYVDD+++A   + ++      L + F +KDLG
Sbjct:    8 QAMKEEMNALERNSTWEIVDKPRDKKAIGCRWIFTVKHKADGTIERYKARLVAKGYTQTYGIDYKETFAPVAKMNTVRVVLALTAHFGWDLHQLDVKSAFLHGNLEEEVYMEIPQGFKVQNERNKVCLLKKALYGLTQSLRAWFGRFTKEMVSLEYRQSQGDHTLFIKHSSTGKFALLFVYVDDMIIAGDDETEKLALKEKLAAQFEMKDLG 219          
BLAST of mRNA_H-elongata_contig173504.4502.1 vs. uniprot
Match: A0A2R6NNP3_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6NNP3_9APHY)

HSP 1 Score: 149 bits (376), Expect = 4.740e-39
Identity = 90/209 (43.06%), Postives = 125/209 (59.81%), Query Frame = 1
Query:    7 AIAREMDGQTTRGVWQVVERPKGKTVLGTRVVFKRKIGKDGKIEKYKCRFVAQGFKQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEIYIELPEGYRDSRKQVGLLKKVMYGLVHAGLLWSKKFGTELEAKGFPRSQADPCVFRRVLHGKVVVVIVVYVDDLLVASATKRDEAQAVRDLCSCFPIKDLG 633
            A A+EM       ++  VE PK + V+G++ VF+ K G +GKIEKYK R VAQGF QVKGI Y E+ +P     SIR +LS+ A L  E  Q+DV  A+L  D++EEIY++ P G+      V  LKK +Y L  A   W KK   E EA GF RS+AD  VF +  +G +++V V YV+D+L+ S + +   Q   +L  C+ + DLG
Sbjct:   12 ACAQEMLAFVKANLFDEVECPKNRKVVGSKWVFRIKRGPNGKIEKYKARLVAQGFTQVKGIDYTETFAPVAKFISIRTLLSLAAKLDLEIHQMDVKSAFLNGDLDEEIYMKCPPGHHAKEGIVWKLKKSLYELKQASCEWYKKVREEFEALGFTRSEADHSVFYKNENGALMIVAV-YVNDMLLFSNSMKGIDQLKAELKDCYEMTDLG 219          
BLAST of mRNA_H-elongata_contig173504.4502.1 vs. uniprot
Match: A0A401H727_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H727_9APHY)

HSP 1 Score: 152 bits (383), Expect = 7.840e-39
Identity = 80/211 (37.91%), Postives = 123/211 (58.29%), Query Frame = 1
Query:    1 EKAIAREMDGQTTRGVWQVVERPKGKTVLGTRVVFKRKIGKDGKIEKYKCRFVAQGFKQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEIYIELPEGYRDSRKQVGLLKKVMYGLVHAGLLWSKKFGTELEAKGFPRSQADPCVFRRVLHGKVVVVIVVYVDDLLVASATKRDEAQAVRDLCSCFPIKDLG 633
            EKA+  E D     G W++ + PK +  +G + VF+RK  K+ ++ KYK R VAQG+ Q+ G+ + E+ +P     SIR +L++     WE  Q+DV  AYL  D++EEIY+  PEG+ D   ++  L+K +YGL  +G  W++K   EL   G+ R +ADPCV+        V +I V+VDDLL+ + + +   +  RDL   F + DLG
Sbjct:  728 EKAVKAEYDQLQGMGTWELQDLPKYRNAVGCKWVFQRKTNKESQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRICRLRKTLYGLKQSGCKWNRKLHRELMELGYKRLEADPCVYLWERKEGEVQIITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLG 938          
BLAST of mRNA_H-elongata_contig173504.4502.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS)

HSP 1 Score: 151 bits (382), Expect = 1.110e-38
Identity = 81/210 (38.57%), Postives = 124/210 (59.05%), Query Frame = 1
Query:    4 KAIAREMDGQTTRGVWQVVERPKGKTVLGTRVVFKRKIGKDGKIEKYKCRFVAQGFKQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEIYIELPEGYRDSRKQVGLLKKVMYGLVHAGLLWSKKFGTELEAKGFPRSQADPCVFRRVLHGKVVVVIVVYVDDLLVASATKRDEAQAVRDLCSCFPIKDLG 633
            KA+  EM      G +   + P G+  +G + VF +K  +DG I +YK R VAQG+ Q+ G+ Y E+ +P     S+R  L + A    E  Q+DV  AYL  ++EEEIY+  PEGY D   +V  L+K +YGL  +G  W+++F  +L + GF + +AD CV++R+  G++ + I V+VDDLL+ S T  D  +   +L + F +KDLG
Sbjct:  896 KAMDEEMSVIKEMGTYTKEDLPAGRDTIGCKWVFLKKYDEDGNISRYKARLVAQGYSQIPGVDYTETFAPVVRLESVRAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGRVCRLRKTLYGLKQSGREWNREFDRKLTSIGFSKLEADHCVYKRIREGRMTI-ITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLG 1104          
BLAST of mRNA_H-elongata_contig173504.4502.1 vs. uniprot
Match: A0A2N9IT45_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9IT45_FAGSY)

HSP 1 Score: 150 bits (378), Expect = 1.800e-38
Identity = 82/211 (38.86%), Postives = 128/211 (60.66%), Query Frame = 1
Query:    7 AIAREMDGQTTRGVWQVVERPKGKTVLGTRVVFKRKIGKDGKIEKYKCRFVAQGFKQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEIYIELPEGY--RDSRKQVGLLKKVMYGLVHAGLLWSKKFGTELEAKGFPRSQADPCVFRRVLHGKVVVVIVVYVDDLLVASATKRDEAQAVRDLCSCFPIKDLG 633
            A+  E D     GVW++V+R +G  V+G + +FKRK    GK+EK+K R VA+G+ Q  G+ +EE+ SP     SIR +LS++A   +E  Q+DV  A+L  D+EE++Y+E PEG+  +    +V  L+K +YGL  A   W+ KF   +   GF ++ ++PCV+ R +H KVV+ + +YVDD+L+A        +  + L   F +KDLG
Sbjct:  349 AMNEEFDSMGKNGVWRLVKRHEGMKVVGCKWIFKRKRDVSGKVEKFKARLVAKGYTQEYGVDFEETFSPVVRIQSIRAILSLVAFFDFELYQMDVKTAFLNGDLEEDVYMEQPEGFISKGDENKVCKLEKSIYGLKQASRQWNLKFHESITMMGFMQNSSEPCVYVRKIHDKVVI-LTLYVDDILLAGNDVDMLDEVKQWLFKTFEMKDLG 558          
BLAST of mRNA_H-elongata_contig173504.4502.1 vs. uniprot
Match: A0A2N9I256_FAGSY (Uncharacterized protein n=4 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9I256_FAGSY)

HSP 1 Score: 150 bits (378), Expect = 3.660e-38
Identity = 82/211 (38.86%), Postives = 128/211 (60.66%), Query Frame = 1
Query:    7 AIAREMDGQTTRGVWQVVERPKGKTVLGTRVVFKRKIGKDGKIEKYKCRFVAQGFKQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEIYIELPEGY--RDSRKQVGLLKKVMYGLVHAGLLWSKKFGTELEAKGFPRSQADPCVFRRVLHGKVVVVIVVYVDDLLVASATKRDEAQAVRDLCSCFPIKDLG 633
            A+  E D     GVW++V+R +G  V+G + +FKRK    GK+EK+K R VA+G+ Q  G+ +EE+ SP     SIR +LS++A   +E  Q+DV  A+L  D+EE++Y+E PEG+  +    +V  L+K +YGL  A   W+ KF   +   GF ++ ++PCV+ R +H KVV+ + +YVDD+L+A        +  + L   F +KDLG
Sbjct:  525 AMNEEFDSMGKNGVWRLVKRHEGMKVVGCKWIFKRKRDVSGKVEKFKARLVAKGYTQEYGVDFEETFSPVVRIQSIRAILSLVAFFDFELYQMDVKTAFLNGDLEEDVYMEQPEGFISKGDENKVCKLEKSIYGLKQASRQWNLKFHESITMMGFMQNSSEPCVYVRKIHDKVVI-LTLYVDDILLAGNDVDMLDEVKQWLFKTFEMKDLG 734          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig173504.4502.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0C2WN23_AMAMK1.710e-4142.86Integrase catalytic domain-containing protein (Fra... [more]
A0A401GXA0_9APHY3.000e-4038.07Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A401GYH9_9APHY9.440e-4038.39Uncharacterized protein n=6 Tax=Sparassis crispa T... [more]
UPI001C988E4D1.290e-3937.56hypothetical protein n=3 Tax=Bacteria TaxID=2 RepI... [more]
A0A151RGT1_CAJCA3.490e-3934.91Retrovirus-related Pol polyprotein from transposon... [more]
A0A2R6NNP3_9APHY4.740e-3943.06Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A401H727_9APHY7.840e-3937.91Integrase catalytic domain-containing protein n=1 ... [more]
A0A284QR88_ARMOS1.110e-3838.57Uncharacterized protein n=2 Tax=Armillaria TaxID=4... [more]
A0A2N9IT45_FAGSY1.800e-3838.86Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A2N9I256_FAGSY3.660e-3838.86Uncharacterized protein n=4 Tax=Fagus sylvatica Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig173504contigH-elongata_contig173504:705..1337 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score146.4
Seed ortholog evalue1.5e-32
Seed eggNOG ortholog3750.XP_008359393.1
EggNOG free text desc.cysteine-rich RLK (RECEPTOR-like protein kinase) 8
EggNOG OGs37RIF@33090,3G9AM@35493,COG2801@1,KOG0017@2759
COG Functional cat.K
Best tax levelStreptophyta
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size633
Cds size612
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930008.5755315-UTR-H-elongata_contig173504:704..7251622930008.5755315-UTR-H-elongata_contig173504:704..725Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig173504 705..725 +
1691679244.01437-UTR-H-elongata_contig173504:704..7251691679244.01437-UTR-H-elongata_contig173504:704..725Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig173504 705..725 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930008.586748-CDS-H-elongata_contig173504:725..13371622930008.586748-CDS-H-elongata_contig173504:725..1337Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig173504 726..1337 +
1691679244.026499-CDS-H-elongata_contig173504:725..13371691679244.026499-CDS-H-elongata_contig173504:725..1337Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig173504 726..1337 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig173504.4502.1prot_H-elongata_contig173504.4502.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig173504 726..1337 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig173504.4502.1

>prot_H-elongata_contig173504.4502.1 ID=prot_H-elongata_contig173504.4502.1|Name=mRNA_H-elongata_contig173504.4502.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=204bp
MDGQTTRGVWQVVERPKGKTVLGTRVVFKRKIGKDGKIEKYKCRFVAQGF
KQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVE
EEIYIELPEGYRDSRKQVGLLKKVMYGLVHAGLLWSKKFGTELEAKGFPR
SQADPCVFRRVLHGKVVVVIVVYVDDLLVASATKRDEAQAVRDLCSCFPI
KDLG
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mRNA from alignment at H-elongata_contig173504:705..1337+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig173504.4502.1 ID=mRNA_H-elongata_contig173504.4502.1|Name=mRNA_H-elongata_contig173504.4502.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=633bp|location=Sequence derived from alignment at H-elongata_contig173504:705..1337+ (Himanthalia elongata Himel1 dioecious)
GAAAAGGCAATCGCGCGCGAGATGGATGGTCAAACCACGCGAGGCGTATG GCAGGTGGTGGAGCGCCCGAAAGGGAAGACGGTGCTGGGCACGAGGGTGG TATTCAAGCGCAAAATTGGCAAAGACGGAAAGATCGAGAAGTATAAGTGT CGTTTCGTGGCGCAGGGTTTTAAGCAGGTTAAGGGAATACACTACGAGGA ATCCTCTTCCCCGACTCCAGCGCAGGCCAGCATAAGGATGGTACTCAGCA TGATCGCGGCTCTCGGCTGGGAGGCGCGGCAGCTGGATGTTGACATGGCC TACCTCGAGGCCGACGTGGAGGAGGAGATCTACATCGAGCTCCCGGAGGG ATACCGTGACTCCAGGAAGCAAGTCGGCCTACTAAAGAAGGTGATGTACG GCCTCGTCCACGCCGGACTGCTGTGGTCGAAAAAGTTCGGGACCGAGCTC GAGGCGAAGGGTTTTCCGAGATCCCAAGCCGACCCATGCGTTTTCCGACG GGTACTTCACGGGAAGGTGGTAGTCGTCATCGTGGTGTACGTTGACGACC TGCTGGTGGCTAGTGCGACGAAGCGCGACGAGGCGCAAGCGGTAAGGGAC CTGTGCTCCTGTTTCCCCATCAAGGACCTAGGG
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Coding sequence (CDS) from alignment at H-elongata_contig173504:705..1337+

>mRNA_H-elongata_contig173504.4502.1 ID=mRNA_H-elongata_contig173504.4502.1|Name=mRNA_H-elongata_contig173504.4502.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1224bp|location=Sequence derived from alignment at H-elongata_contig173504:705..1337+ (Himanthalia elongata Himel1 dioecious)
ATGGATGGTCAAACCACGCGAGGCGTATGGCAGGTGGTGGAGCGCCCGAA
AGGGAAGACGGTGCTGGGCACGAGGGTGGTATTCAAGCGCAAAATTGGCA
AAGACGGAAAGATCGAGAAGTATAAGTGTCGTTTCGTGGCGCAGGGTTTT
AAGCAGGTTAAGGGAATACACTACGAGGAATCCTCTTCCCCGACTCCAGC
GCAGGCCAGCATAAGGATGGTACTCAGCATGATCGCGGCTCTCGGCTGGG
AGGCGCGGCAGCTGGATGTTGACATGGCCTACCTCGAGGCCGACGTGGAG
GAGGAGATCTACATCGAGCTCCCGGAGGGATACCGTGACTCCAGGAAGCA
AGTCGGCCTACTAAAGAAGGTGATGTACGGCCTCGTCCACGCCGGACTGC
TGTGGTCGAAAAAGTTCGGGACCGAGCTCGAGGCGAAGGGTTTTCCGAGA
TCCCAAGCCGACCCATGCGTTTTCCGACGGGTACTTCACGGGAAGGTGGT
AGTCGTCATCGTGGTGTACGTTGACGACCTGCTGGTGGCTAGTGCGACGA
AGCGCGACGAGGCGCAAGCGGTAAGGGACCTGTGCTCCTGTTTCCCCATC
AAGGACCTAGGGATGGATGGTCAAACCACGCGAGGCGTATGGCAGGTGGT
GGAGCGCCCGAAAGGGAAGACGGTGCTGGGCACGAGGGTGGTATTCAAGC
GCAAAATTGGCAAAGACGGAAAGATCGAGAAGTATAAGTGTCGTTTCGTG
GCGCAGGGTTTTAAGCAGGTTAAGGGAATACACTACGAGGAATCCTCTTC
CCCGACTCCAGCGCAGGCCAGCATAAGGATGGTACTCAGCATGATCGCGG
CTCTCGGCTGGGAGGCGCGGCAGCTGGATGTTGACATGGCCTACCTCGAG
GCCGACGTGGAGGAGGAGATCTACATCGAGCTCCCGGAGGGATACCGTGA
CTCCAGGAAGCAAGTCGGCCTACTAAAGAAGGTGATGTACGGCCTCGTCC
ACGCCGGACTGCTGTGGTCGAAAAAGTTCGGGACCGAGCTCGAGGCGAAG
GGTTTTCCGAGATCCCAAGCCGACCCATGCGTTTTCCGACGGGTACTTCA
CGGGAAGGTGGTAGTCGTCATCGTGGTGTACGTTGACGACCTGCTGGTGG
CTAGTGCGACGAAGCGCGACGAGGCGCAAGCGGTAAGGGACCTGTGCTCC
TGTTTCCCCATCAAGGACCTAGGG
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