mRNA_H-elongata_contig1735.4501.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig1735.4501.1
Unique NamemRNA_H-elongata_contig1735.4501.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig1735.4501.1 vs. uniprot
Match: A0A6H5JT33_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT33_9PHAE)

HSP 1 Score: 214 bits (545), Expect = 6.940e-55
Identity = 251/687 (36.54%), Postives = 307/687 (44.69%), Query Frame = 1 
Query:    1 YKDNKFSSFVRQLNFYGFRKVKSSIAADDADIKWWEFKHDLFRRDHPQLLITMKRATHYGAPVDSKEVEDLRSEVNRLRNHIDNMGDKIGQLTSLVEALAVEGAGRPTGSLSSRASADPSRGVRCESGAAMRGWGIEDVDGLGGVGVGLGRLSVD---GCGENH-DEEDSKL-FPPAAPAGA--------------GCCDAAA---FLPLHVMSRKRKIM----VENVGIGDGPKNVCDNGSVASPWTSGAAASGVVVKQEMIVDPRQRATERPTVKPEMMDEEPVSETPA-SWPPYAEPPVPSSLTTPDAADAAFSTSDSLRAASSFARGNSG---DFLEGFTEQFLSFELPSSSYVFPDRAAGGKSTDRCGSGKGPVASVGRGYAMTDIDVDVGIDGSDCRSQSEGEEHIDIEGEVGMLATAMSLGLEGRATAPALAHGVVGGISGTGAGGDGVSTAMRATPSPIQDPSMNETCEKGATW------------TLPLGLEELQHSLESLPLHSKTKVWVEIGGIE-ASDRSLWICFPSPCLPNNAFNESALKEGLSALMQHPTFLAALIAHGQGKGAPVASSASNEETP--GVRPTDVADGAISPDRAISNNEGNTSRARSPTQNAEEGCESVSANSGXXXXXXXXXXXXXXXXXXXXXXGCCPS-RSQNRGEFGGRLPRSEEACA 1923
            +K +KFSSFVRQLNFYGFRKVKS  +    + KWWEFKHDLF RD   LL  M+RATHYG   D +EVE LRSEV RLR+HI +MGDKIGQLTSLVE+L+VEG     G  +    A     V    G      G E    L GV  GLGRLS       G+   D ED +   PPA PAGA              G  D  A   FLPL   SRKRK++    V   G G G                    S  V+KQEM V  ++   +    + E+     +    + S PP AE P                   S    S F  G+S    +FL GF +QFLS E P++SY+ PDR   G       S    VA      AMT     V   G+ CR+ S                      L GR +     +       GT  G        R     +++    ETCE G T             +L L     Q ++    L  +     ++  +E A  +S     PSP  P        LKEGLS LMQ+P  LAAL    + + +  + S SN  +P     PT  A G   P  A S+     +           G  + +A+  XXXXXXXXXXXXXXXXXXXXXX  C S RS+ RGEFG R PRSEEACA
Sbjct:   72 FKHSKFSSFVRQLNFYGFRKVKSKASGAGVNSKWWEFKHDLFHRDKSHLLADMRRATHYGVAADKQEVEQLRSEVTRLRSHIHDMGDKIGQLTSLVESLSVEGHAGSGGDTTVEGPAGQ-LAVSHRRGPTPPPGGDE----LCGVRAGLGRLSFGFDAAAGDQEGDGEDLRFSLPPAVPAGACGVPDRSDLEDVEVGLADDPALGSFLPLRARSRKRKLVRFDGVLANGSGSGXXXXXXXXXXXXXXXXXXXHSPAVIKQEMAVK-QEMVVDPMDAESELAGGGDLGAFASNSTPPLAETP-------------------SAELVSGFGGGSSSSSNEFLHGFADQFLSTESPTASYMLPDRGGAGDGDFTAASTSDDVAFSAA--AMTGNWTSVVQGGAGCRACS--------------CVAPDGGSLNGRGSGGGTDNXXXXXXXGTRDG--------RQARHAMEEDFNVETCETGQTDESSIPSIPSPPPSLSLNTRSGQSAVVQRALQQQQTQQQQLHAVEDARGKSSGAAGPSPFPPPPLRTGEELKEGLSTLMQNPALLAALT---EKQRSSYSESGSNRSSPTNNSAPTAAAAG---PQMAESDARATVAEKGQARPRTRSGAVAAAASXXXXXXXXXXXXXXXXXXXXXXXXXXCSSGRSRGRGEFGQRFPRSEEACA 703
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BLAST of mRNA_H-elongata_contig1735.4501.1 vs. uniprot
Match: D8LTY4_ECTSI (Heat Shock transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTY4_ECTSI)

HSP 1 Score: 174 bits (441), Expect = 1.280e-43
Identity = 123/282 (43.62%), Postives = 149/282 (52.84%), Query Frame = 1 
Query:    1 YKDNKFSSFVRQLNFYGFRKVKSSIAADDADIKWWEFKHDLFRRDHPQLLITMKRATHYGAPVDSKEVEDLRSEVNRLRNHIDNMGDKIGQLTSLVEALAVEGAGRPTGSLSSRASADPSRGVRCESGAAMRGWGIEDVDG---LGGVGVGLGRLSV--DGCGENHDEEDSKL---FPPAAPAGA----------------GCCDAA--AFLPLHVMSRKRKIMVENVGIGDGPKNVCDNGSVASPW----------TSGAAASGVVVKQEMIVDPRQRATE 738
            +K +KFSSFVRQLNFYGFRKVKS+ +    + KWWEFKHDLF RD   LL  M+RATHYG   D +EVE LRSEV RLR+HID MGDKIGQLTSLVE+L+VEG    TGS     +A P+  +     AA    G     G   L GV  GLGRLS   D    + +E+   L    PPA PAGA                G  D A  +FLPL   SRKRK++  +  + +G                        +       + VKQEM+VDP    +E
Sbjct:   72 FKHSKFSSFVRQLNFYGFRKVKSNASGAGVNSKWWEFKHDLFHRDKSHLLADMRRATHYGVAADKQEVEHLRSEVTRLRSHIDAMGDKIGQLTSLVESLSVEG---HTGSGGDTTAAGPAGQL-----AASHRHGPTPPPGGDELCGVRAGLGRLSFGFDAAAGDQEEDGEDLRFSLPPAVPAGACGVPDRSDLEDVEVGLGEADPALGSFLPLRARSRKRKLVRFDGVLANGXXXXXXXXXXXXXXXXXXXXXXXHSPAVIKQEMTVKQEMLVDPMDAESE 345
[Close]
BLAST of mRNA_H-elongata_contig1735.4501.1 vs. uniprot
Match: A0A6H5L567_9PHAE (HSF_DOMAIN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L567_9PHAE)

HSP 1 Score: 128 bits (322), Expect = 1.370e-27
Identity = 61/102 (59.80%), Postives = 74/102 (72.55%), Query Frame = 1 
Query:    1 YKDNKFSSFVRQLNFYGFRKVKSSIAADDADIKWWEFKHDLFRRDHPQLLITMKRATHYGAPVDSKEVEDLRSEVNRLRNHIDNMGDKIGQLTSLVEALAVE 306
            +K NKFSSFVRQLNFYGFRKVKS+I  D  D KWWEFKHDLF RD P LL  ++RATHYG   + +EV+DLRSEV  LR  + +M  +I  L+ +V+ L  E
Sbjct:   67 FKHNKFSSFVRQLNFYGFRKVKSNITVDGQDSKWWEFKHDLFLRDKPNLLSEIRRATHYGVTPEKQEVDDLRSEVGSLRLQVVDMDGRIDALSRMVDRLLEE 168
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BLAST of mRNA_H-elongata_contig1735.4501.1 vs. uniprot
Match: A0A836CRK9_9STRA (HSF-type DNA-binding-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CRK9_9STRA)

HSP 1 Score: 112 bits (280), Expect = 1.250e-22
Identity = 61/113 (53.98%), Postives = 79/113 (69.91%), Query Frame = 1 
Query:    1 YKDNKFSSFVRQLNFYGFRKVKSSI--------AADDADI-KWWEFKHDLFRRDHPQLLITMKRATHYGAPVDSKEVEDLRSEVNRLRNHIDNMGDKIGQLTSLVEALAVEGA 312
            +K +KF+SFVRQLNFYGFRKVKS++        AA DAD  +WWEFKHDLF RD P LL  ++RATHY AP + KEV+ L+ EV+ L+  I  M ++I  LT+L E +  +GA
Sbjct:   68 FKHSKFASFVRQLNFYGFRKVKSALPLGARERSAAADADTSQWWEFKHDLFARDAPHLLSAIRRATHYVAPPE-KEVDALKGEVSTLQARIVTMDERISSLTTLPEPVYEDGA 179
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BLAST of mRNA_H-elongata_contig1735.4501.1 vs. uniprot
Match: A0A7S2V607_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V607_9STRA)

HSP 1 Score: 104 bits (260), Expect = 2.970e-21
Identity = 44/97 (45.36%), Postives = 71/97 (73.20%), Query Frame = 1 
Query:   13 KFSSFVRQLNFYGFRKVKSS--IAADDADIKWWEFKHDLFRRDHPQLLITMKRATHYGAPVDSKEVEDLRSEVNRLRNHIDNMGDKIGQLTSLVEAL 297
            KFSSFVRQLNFYGFRK+KS   +  +  + +WWEFKH+ F++D P+LL  +KRATH+ +  ++++++ +++E+  ++  ++ M D I +LTSLV  L
Sbjct:   42 KFSSFVRQLNFYGFRKIKSDRVVKTNSVENRWWEFKHENFQKDRPELLAEIKRATHFNSTAENEDLQTIKAEMAFMKERMEKMSDTISELTSLVNHL 138
[Close]
BLAST of mRNA_H-elongata_contig1735.4501.1 vs. uniprot
Match: A0A835YK43_9STRA (HSF-type DNA-binding-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK43_9STRA)

HSP 1 Score: 100 bits (250), Expect = 3.960e-20
Identity = 54/103 (52.43%), Postives = 69/103 (66.99%), Query Frame = 1 
Query:    1 YKDNKFSSFVRQLNFYGFRKVKSSIAADDADIK-WWEFKHDLFRRDHPQLLITMKRATHYGAPVDSKEVEDLRSEVNRLRNHIDNMGDKIGQLTSLVEALAVE 306
            +K +KFSSFVRQLNFYGFRKVK+    D A    WWEFKHDLF R  P L+  +KRATHY AP ++ EV+ LR+EV  L   +  M  +I  L++LV+ L  +
Sbjct:   71 FKHSKFSSFVRQLNFYGFRKVKALDGRDAAAAAGWWEFKHDLFTRATPHLIAEIKRATHYVAPPEA-EVDALRTEVTTLTERMLAMDARIAALSALVDELRAQ 172
[Close]
BLAST of mRNA_H-elongata_contig1735.4501.1 vs. uniprot
Match: A0A7S2WDE9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WDE9_9STRA)

HSP 1 Score: 102 bits (254), Expect = 2.360e-19
Identity = 56/105 (53.33%), Postives = 69/105 (65.71%), Query Frame = 1 
Query:    1 YKDNKFSSFVRQLNFYGFRKVKSSIAA-DDADIKWWEFKHDLFRRDHPQLLITMKRATHYG-APVDSKE-VEDLRSEVNRLRNHIDNMGDKIGQLTSLVEALAVE 306
            +K   F SFVRQLNFYGFRK+++  A   D    WWEF+H+ F R  P+LL  +KRA HY  AP D  E VEDL+SEV +LR  ID+M   I +LTSLV+ L  E
Sbjct:  101 FKHKNFRSFVRQLNFYGFRKLRTDGALISDRPSNWWEFRHEKFLRGKPELLTHIKRANHYETAPADQVELVEDLKSEVFQLRERIDDMSSTIEKLTSLVDTLMRE 205
[Close]
BLAST of mRNA_H-elongata_contig1735.4501.1 vs. uniprot
Match: A0A7S2BCY3_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BCY3_9STRA)

HSP 1 Score: 100 bits (248), Expect = 5.210e-19
Identity = 51/104 (49.04%), Postives = 67/104 (64.42%), Query Frame = 1 
Query:    1 YKDNKFSSFVRQLNFYGFRKVKSSIAA-DDADIKWWEFKHDLFRRDHPQLLITMKRATHYG-APVDSKEVEDLRSEVNRLRNHIDNMGDKIGQLTSLVEALAVE 306
            +K   F SFVRQLNFYGFRK+++  A   +    WWEF+HD F R H +LL+ +KRA HY  AP +  EVE L++EV  LR+ I +M   I  LT LV+ L +E
Sbjct:   66 FKHRNFRSFVRQLNFYGFRKLRTDGALISERPAHWWEFRHDKFLRGHSRLLVQIKRANHYEPAPSEQGEVEFLKTEVTNLRDRIHDMSQTIEHLTELVDTLLLE 169
[Close]
BLAST of mRNA_H-elongata_contig1735.4501.1 vs. uniprot
Match: A0A7S2HSW5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HSW5_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 1.450e-18
Identity = 45/103 (43.69%), Postives = 68/103 (66.02%), Query Frame = 1 
Query:    1 YKDNKFSSFVRQLNFYGFRKVKSSIAADDADIKWWEFKHDLFRRDHPQLLITMKRATHYGAP-VDSKEVEDLRSEVNRLRNHIDNMGDKIGQLTSLVEALAVE 306
            YK   F+SFVRQLNFYGFRK+++  A+  ++ +WW F+H+ FRR    LL  +KR++H+  P  DS+  E+L++EV RLR+ ++ +   I QLT +   L  E
Sbjct:   40 YKHKNFTSFVRQLNFYGFRKLRADDASSFSNPQWWGFRHEKFRRGQYHLLRLIKRSSHFETPDQDSEGTEELKTEVFRLRDRVEQLQSTIDQLTKVTNTLLSE 142
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BLAST of mRNA_H-elongata_contig1735.4501.1 vs. uniprot
Match: A0A7S1GQW1_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GQW1_CYCTE)

HSP 1 Score: 96.3 bits (238), Expect = 1.320e-17
Identity = 49/106 (46.23%), Postives = 70/106 (66.04%), Query Frame = 1 
Query:    1 YKDNKFSSFVRQLNFYGFRKVKS-----SIAADDADIKWWEFKHDLFRRDHPQLLITMKRATHYGAPVDSKEVEDLRSEVNRLRNHIDNMGDKIGQLTSLVEALAV 303
            +K N FSSFVRQLNFYGFRK+KS     + A +D + KWW F+H+ F+R  P LL  +++A    +P D +EV+ L++EV  LR  + NM   I +LT+LV+ + V
Sbjct:   94 FKHNNFSSFVRQLNFYGFRKIKSDPIKINTAINDIESKWWRFRHEKFQRGRPDLLGEIRKANQTESP-DKQEVDALKNEVKDLRARMANMATDIDKLTALVKNMMV 198
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1735.4501.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JT33_9PHAE6.940e-5536.54HSF_DOMAIN domain-containing protein n=1 Tax=Ectoc... [more]
D8LTY4_ECTSI1.280e-4343.62Heat Shock transcription factor n=1 Tax=Ectocarpus... [more]
A0A6H5L567_9PHAE1.370e-2759.80HSF_DOMAIN domain-containing protein n=2 Tax=Ectoc... [more]
A0A836CRK9_9STRA1.250e-2253.98HSF-type DNA-binding-domain-containing protein n=1... [more]
A0A7S2V607_9STRA2.970e-2145.36Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A835YK43_9STRA3.960e-2052.43HSF-type DNA-binding-domain-containing protein n=1... [more]
A0A7S2WDE9_9STRA2.360e-1953.33Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2BCY3_9STRA5.210e-1949.04Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A7S2HSW5_9STRA1.450e-1843.69Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S1GQW1_CYCTE1.320e-1746.23Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1735contigH-elongata_contig1735:10107..14092 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHeat Shock transcription factor
Ec32 orthologEc-12_003890.1
Exons5
Model size3135
Cds size1770
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930008.4723275-UTR-H-elongata_contig1735:10106..113151622930008.4723275-UTR-H-elongata_contig1735:10106..11315Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1735 10107..11315 -
1691679243.9394412-UTR-H-elongata_contig1735:10106..113151691679243.9394412-UTR-H-elongata_contig1735:10106..11315Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1735 10107..11315 -
1622930008.5341651-UTR-H-elongata_contig1735:13417..134591622930008.5341651-UTR-H-elongata_contig1735:13417..13459Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1735 13418..13459 -
1691679243.9980395-UTR-H-elongata_contig1735:13417..134591691679243.9980395-UTR-H-elongata_contig1735:13417..13459Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1735 13418..13459 -
1622930008.5442097-UTR-H-elongata_contig1735:13978..140921622930008.5442097-UTR-H-elongata_contig1735:13978..14092Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1735 13979..14092 -
1691679244.0054216-UTR-H-elongata_contig1735:13978..140921691679244.0054216-UTR-H-elongata_contig1735:13978..14092Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1735 13979..14092 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930008.4849842-CDS-H-elongata_contig1735:11315..117171622930008.4849842-CDS-H-elongata_contig1735:11315..11717Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1735 11316..11717 -
1691679243.956247-CDS-H-elongata_contig1735:11315..117171691679243.956247-CDS-H-elongata_contig1735:11315..11717Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1735 11316..11717 -
1622930008.49517-CDS-H-elongata_contig1735:11804..118871622930008.49517-CDS-H-elongata_contig1735:11804..11887Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1735 11805..11887 -
1691679243.96727-CDS-H-elongata_contig1735:11804..118871691679243.96727-CDS-H-elongata_contig1735:11804..11887Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1735 11805..11887 -
1622930008.50964-CDS-H-elongata_contig1735:12087..125311622930008.50964-CDS-H-elongata_contig1735:12087..12531Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1735 12088..12531 -
1691679243.977393-CDS-H-elongata_contig1735:12087..125311691679243.977393-CDS-H-elongata_contig1735:12087..12531Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1735 12088..12531 -
1622930008.5238547-CDS-H-elongata_contig1735:12576..134171622930008.5238547-CDS-H-elongata_contig1735:12576..13417Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1735 12577..13417 -
1691679243.9871204-CDS-H-elongata_contig1735:12576..134171691679243.9871204-CDS-H-elongata_contig1735:12576..13417Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1735 12577..13417 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1735.4501.1prot_H-elongata_contig1735.4501.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig1735 11316..13417 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig1735.4501.1

>prot_H-elongata_contig1735.4501.1 ID=prot_H-elongata_contig1735.4501.1|Name=mRNA_H-elongata_contig1735.4501.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=590bp
MKRATHYGAPVDSKEVEDLRSEVNRLRNHIDNMGDKIGQLTSLVEALAVE
GAGRPTGSLSSRASADPSRGVRCESGAAMRGWGIEDVDGLGGVGVGLGRL
SVDGCGENHDEEDSKLFPPAAPAGAGCCDAAAFLPLHVMSRKRKIMVENV
GIGDGPKNVCDNGSVASPWTSGAAASGVVVKQEMIVDPRQRATERPTVKP
EMMDEEPVSETPASWPPYAEPPVPSSLTTPDAADAAFSTSDSLRAASSFA
RGNSGDFLEGFTEQFLSFELPSSSYVFPDRAAGGKSTDRCGSGKGPVASV
GRGYAMTDIDVDVGIDGSDCRSQSEGEEHIDIEGEVGMLATAMSLGLEGR
ATAPALAHGVVGGISGTGAGGDGVSTAMRATPSPIQDPSMNETCEKGATW
TLPLGLEELQHSLESLPLHSKTKVWVEIGGIEASDRSLWICFPSPCLPNN
AFNESALKEGLSALMQHPTFLAALIAHGQGKGAPVASSASNEETPGVRPT
DVADGAISPDRAISNNEGNTSRARSPTQNAEEGCESVSANSGSGKTSSSS
SSSNGAGSGGTGSGGCCPSRSQNRGEFGGRLPRSEEACA*
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mRNA from alignment at H-elongata_contig1735:10107..14092-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig1735.4501.1 ID=mRNA_H-elongata_contig1735.4501.1|Name=mRNA_H-elongata_contig1735.4501.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3986bp|location=Sequence derived from alignment at H-elongata_contig1735:10107..14092- (Himanthalia elongata Himel1 dioecious)
TATAAAGATAACAAATTCAGCTCGTTCGTGAGGCAGCTCAACTTCTACGG
CTTCCGGAAGGTCAAGTCCAGCATCGCCGCGGATGACGCCGATATCAAGT
GGTGGGAGTTCAAGGTGGGCCGGGGTCGATTGACACATCAGCTTCAATTT
GTGAAGCGTTTCTGAGAACGTACTATTTTTGCAACCGTCTCTGATCAGGA
CCTGACAGAGTTCACCCGCGGTTGAGATTGTTTCTGGGGGGTGATGCAGC
CGAAGGGGGCGTGTGGTTGGCCCCCTGTCTTGCGCCGTGAGGTCCTCGTG
TCACTTGAGTGACTTGAGTAATCGTGTTTATTTTGTATTTGATGTGCGTA
TGTAATTGTAATACTTTGCAGATATAGTTTCGATCTTTCGATCTATATCA
CAGACCTTCGGCGAGTGCTTCATGGAAATGACCGCAAAAATATAGCTGAA
TAGTGGTAGCCCCCGCAAAGCTCAAGCCCGGCCGGCGTACCAAGTGCTCC
CGAGTCCCCCGATTCACCGAAAGTAACAAGGCCAAACCCTCCCCCCCCCC
CCCCCCCACCCCCTCCCTGCCTCCTTGACCTCGGCATCTGCCTGCCGCCG
AATACAACTAATCCAAACCAAACCCAATGACAGCACGATCTTTTTCGCAG
AGATCATCCGCAGCTTTTGATCACAATGAAGAGGGCGACCCACTATGGAG
CCCCGGTCGATTCCAAAGAGGTCGAGGACCTGCGCTCGGAAGTCAATCGA
CTCCGTAACCACATCGACAACATGGGCGACAAGATCGGTCAGCTCACATC
CCTCGTCGAAGCGCTCGCTGTAGAGGGAGCAGGGAGGCCCACCGGCTCAC
TCTCTTCCCGGGCTTCCGCCGACCCGTCGCGTGGTGTTCGATGCGAATCG
GGAGCTGCAATGAGGGGATGGGGGATCGAAGATGTCGACGGACTTGGCGG
CGTCGGTGTCGGGCTCGGCCGTCTTTCGGTTGACGGCTGCGGTGAGAACC
ATGATGAGGAAGACTCTAAGCTTTTCCCGCCCGCGGCTCCAGCTGGCGCC
GGCTGCTGCGATGCTGCCGCGTTTTTACCGCTGCATGTCATGTCGCGAAA
GCGGAAGATTATGGTGGAAAACGTTGGTATCGGCGATGGGCCTAAAAATG
TCTGTGACAACGGTAGCGTGGCCTCGCCGTGGACTTCAGGGGCCGCTGCC
AGCGGGGTGGTTGTGAAGCAGGAGATGATCGTCGACCCTCGGCAGCGGGC
GACCGAACGACCCACGGTAAAGCCAGAGATGATGGACGAAGAACCTGTCA
GCGAGACACCTGCTTCGTGGCCGCCATACGCCGAGCCCCCAGTCCCGTCT
TCTTTGACGACTCCCGACGCTGCGGATGCCGCGTTTTCCACATCAGATTC
GCTACGAGCGGCGTCATCATTCGCCCGCGGCAACAGCGGCGACTTTCTCG
AGGGTTTCACCGAACAGTTTCTGTCATTCGAGTTGCCGTCGTCAAGTTAC
GTGTTCCCTGACCGTGGTACAGTCCCCGGAGCAGCAGCCTCCGCGATTCC
ACCACACGAAGCAGCGGGCGGCAAGAGTACCGACAGATGCGGCAGCGGCA
AAGGCCCGGTCGCCTCGGTCGGGAGGGGCTACGCCATGACGGACATCGAC
GTGGACGTGGGCATTGATGGGAGTGACTGCAGGAGCCAGAGCGAGGGAGA
GGAACACATCGACATCGAGGGCGAGGTTGGGATGTTGGCGACCGCGATGT
CCTTGGGACTGGAAGGGAGAGCCACGGCTCCCGCGCTCGCGCATGGTGTT
GTCGGTGGGATCAGCGGCACCGGGGCGGGCGGGGACGGGGTGTCCACGGC
TATGCGGGCCACCCCCAGCCCTATCCAAGACCCATCGATGAACGAGACGT
GCGAAAAGGGTGCAACATGGACGTTACCACTAGGCTTAGAGGAGCTCCAA
CACAGCCTCGAGTCGCTACCTCTTCACAGCAAAACGAAGGTTTGGGTCGA
AATTGGTTGTGTTTTTCGCGGCGATACCCCCCCCCCCCTATCATCCACTG
ATCTCATCTCTCGCACGGCGGGCAATTATCTTGCCCGTGAGGTACCAAAA
TCCGAGGGGTTTATTTTGTTAGCAAGTTTACTGCTTCTCAACAATTTATA
CTGAGGCAATCGTGCATTAAAAATCAGTGGGAGCGCGTCTAGAAGGTGTA
TTGAGGGGGGATCGAGGCCTCTGATCGCTCGTTATGGATATGCTTCCCTA
GCCCATGTCTGCCTAACAATGCTTTCAACGAGAGTGCTGTACAAAACCCG
TTTATCGTTACCTTCTTTCCCATGCCCTTTTGCCTCCCCGCCTTGTTTAA
TGGTCAATCCCCACCGTTACCTTAGCTCAAGGAGGGCCTATCTGCGCTCA
TGCAGCACCCGACGTTTCTGGCAGCTCTGATCGCCCACGGCCAAGGGAAA
GGCGCGCCGGTCGCTTCGAGCGCCTCAAACGAGGAGACTCCTGGGGTGAG
ACCAACCGATGTCGCCGACGGCGCCATCTCGCCTGATCGCGCGATATCAA
ACAACGAAGGAAATACATCTAGGGCGCGCTCTCCGACACAGAACGCCGAA
GAGGGTTGCGAATCGGTATCCGCGAACAGTGGCAGCGGCAAGACCAGCAG
TAGTAGCAGCAGTAGCAACGGGGCAGGTAGCGGGGGTACGGGGAGCGGCG
GCTGTTGCCCCAGTCGGTCACAGAATCGGGGAGAGTTCGGCGGGCGCTTA
CCGAGGTCGGAAGAGGCTTGTGCGTAAGCGATCTCAAAAGTTAAATATTT
TCCCCAGATTCCTATATATACATTATGATTTATACGGTGGATGGGGAGGG
GGTGAGGGAGAGAGATGGAAAAACTTTGTCGGTCCACTTTGCTGTTTTCC
GTTAGTTAGAGAGGGTGGGTCGCTTACGTGATTGCTTTGCGGTCACGCTA
TAGGCGTGCGGTGGTCCCATCACTTAAAACATTGTCGTGATTTGCTTCAA
GAACGCTCCTTTTTTGGTTCGTCAATCACCGACGCTACTAGGCGCAGCTA
ATTTACCCTGGATGCTCATTCGCGGGAAGTCTTTCGTTTTGAAAAGTTTC
AGCCAAGCCTAAATTCTACGCTGGCCACTAAGTAGAGGTTATAATAGATG
CAGTCGCTGAAACACTAGCTCAGATATATCGAATGATAAGCTGTGTAGCG
CCTGAAGAGTGGAATTACAAGAGTGTAAACTGGCGATAAATATGGTACTG
TACATGATGTTTATTGGTGGTGCGCACTGCAAATTAATCGATTGAATCGC
AATCGCAATCGCACACAAGGTAAATTTGGGGGAGACACGCTACCCAATCG
CGCGACGTGCACGTAGGTACGTAGCTGCGATAGCTCGACGCCATCTCTTC
AGGCCAGGTTGCTTCGATAGCTCGAGACTTTGAGGCTCCGTCACCTTCGA
ACATCCCGGCTGTGACCTGCCAGTGTGCAATGCGCTGGCGCTGTGACCAC
GTCCTTTTAAACGGTACTAATACATATCATCGCTTCTAGATACACGAACA
ACAGTTGTGGAGGTCCTGATAGTGCAAACAGCTTGATTTATTTAGATAAA
AAAATAAAAACCAGCACGCAGAAACTAATCCGCTCTATCCGTTTGCCCCA
GGCTACAGTTCAATATTTTCGTAAAACACCAACGTGGATCTCGCCAGCTT
TAGTGAAGGATCCAACTCTTGGGTTCGTCCTCCAAGCGCAGCCGACATAC
TAGAATTGATCAAAGGATCTACCGTTTCGCACCGGTCTACCACACTCCTA
GGATAAGGATACTTGGCACATTTTAACCACGCGCACCCCCACACGCCGTA
GAAACGCGCTGCCCTTCTCAGATTCAAGAAAATTCCCTGCCTTGAAGAGA
GCAGACTAAAAAGAAACGTAACCGCAAACGTGCGACGATGCCCCCCCCCC
CCTACCCTTTTTAGAGAACGCATACGTTTTGAGACA
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Coding sequence (CDS) from alignment at H-elongata_contig1735:10107..14092-

>mRNA_H-elongata_contig1735.4501.1 ID=mRNA_H-elongata_contig1735.4501.1|Name=mRNA_H-elongata_contig1735.4501.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3540bp|location=Sequence derived from alignment at H-elongata_contig1735:10107..14092- (Himanthalia elongata Himel1 dioecious)
ATGAAGAGGGCGACCCACTATGGAGCCCCGGTCGATTCCAAAGAGGTCGA
GGACCTGCGCTCGGAAGTCAATCGACTCCGTAACCACATCGACAACATGG
GCGACAAGATCGGTCAGCTCACATCCCTCGTCGAAGCGCTCGCTGTAGAG
GGAGCAGGGAGGCCCACCGGCTCACTCTCTTCCCGGGCTTCCGCCGACCC
GTCGCGTGGTGTTCGATGCGAATCGGGAGCTGCAATGAGGGGATGGGGGA
TCGAAGATGTCGACGGACTTGGCGGCGTCGGTGTCGGGCTCGGCCGTCTT
TCGGTTGACGGCTGCGGTGAGAACCATGATGAGGAAGACTCTAAGCTTTT
CCCGCCCGCGGCTCCAGCTGGCGCCGGCTGCTGCGATGCTGCCGCGTTTT
TACCGCTGCATGTCATGTCGCGAAAGCGGAAGATTATGGTGGAAAACGTT
GGTATCGGCGATGGGCCTAAAAATGTCTGTGACAACGGTAGCGTGGCCTC
GCCGTGGACTTCAGGGGCCGCTGCCAGCGGGGTGGTTGTGAAGCAGGAGA
TGATCGTCGACCCTCGGCAGCGGGCGACCGAACGACCCACGGTAAAGCCA
GAGATGATGGACGAAGAACCTGTCAGCGAGACACCTGCTTCGTGGCCGCC
ATACGCCGAGCCCCCAGTCCCGTCTTCTTTGACGACTCCCGACGCTGCGG
ATGCCGCGTTTTCCACATCAGATTCGCTACGAGCGGCGTCATCATTCGCC
CGCGGCAACAGCGGCGACTTTCTCGAGGGTTTCACCGAACAGTTTCTGTC
ATTCGAGTTGCCGTCGTCAAGTTACGTGTTCCCTGACCGTGATGAAGAGG
GCGACCCACTATGGAGCCCCGGTCGATTCCAAAGAGGTCGAGGACCTGCG
CTCGGAAGTCAATCGACTCCGTAACCACATCGACAACATGGGCGACAAGA
TCGGTCAGCTCACATCCCTCGTCGAAGCGCTCGCTGTAGAGGGAGCAGGG
AGGCCCACCGGCTCACTCTCTTCCCGGGCTTCCGCCGACCCGTCGCGTGG
TGTTCGATGCGAATCGGGAGCTGCAATGAGGGGATGGGGGATCGAAGATG
TCGACGGACTTGGCGGCGTCGGTGTCGGGCTCGGCCGTCTTTCGGTTGAC
GGCTGCGGTGAGAACCATGATGAGGAAGACTCTAAGCTTTTCCCGCCCGC
GGCTCCAGCTGGCGCCGGCTGCTGCGATGCTGCCGCGTTTTTACCGCTGC
ATGTCATGTCGCGAAAGCGGAAGATTATGGTGGAAAACGTTGGTATCGGC
GATGGGCCTAAAAATGTCTGTGACAACGGTAGCGTGGCCTCGCCGTGGAC
TTCAGGGGCCGCTGCCAGCGGGGTGGTTGTGAAGCAGGAGATGATCGTCG
ACCCTCGGCAGCGGGCGACCGAACGACCCACGGTAAAGCCAGAGATGATG
GACGAAGAACCTGTCAGCGAGACACCTGCTTCGTGGCCGCCATACGCCGA
GCCCCCAGTCCCGTCTTCTTTGACGACTCCCGACGCTGCGGATGCCGCGT
TTTCCACATCAGATTCGCTACGAGCGGCGTCATCATTCGCCCGCGGCAAC
AGCGGCGACTTTCTCGAGGGTTTCACCGAACAGTTTCTGTCATTCGAGTT
GCCGTCGTCAAGTTACGTGTTCCCTGACCGTGCAGCGGGCGGCAAGAGTA
CCGACAGATGCGGCAGCGGCAAAGGCCCGGTCGCCTCGGTCGGGAGGGGC
TACGCCATGACGGACATCGACGTGGACGTGGGCATTGATGGGAGTGACTG
CAGGAGCCAGAGCGAGGGAGAGGAACACATCGACATCGAGGGCGAGGTTG
GGATGTTGGCGACCGCGATGTCCTTGGGACTGGAAGGGAGAGCCACGGCT
CCCGCGCTCGCGCATGGTGTTGTCGGTGGGATCAGCGGCACCGGGGCGGG
CGGGGACGGGGTGTCCACGGCTATGCGGGCCACCCCCAGCCCTATCCAAG
ACCCATCGATGAACGAGACGTGCGAAAAGGGTGCAACATGGACGTTACCA
CTAGGCTTAGAGGAGCTCCAACACAGCCTCGAGTCGCTACCTCTTCACAG
CAAAACGAAGGTTTGGGTCGAAATTGCAGCGGGCGGCAAGAGTACCGACA
GATGCGGCAGCGGCAAAGGCCCGGTCGCCTCGGTCGGGAGGGGCTACGCC
ATGACGGACATCGACGTGGACGTGGGCATTGATGGGAGTGACTGCAGGAG
CCAGAGCGAGGGAGAGGAACACATCGACATCGAGGGCGAGGTTGGGATGT
TGGCGACCGCGATGTCCTTGGGACTGGAAGGGAGAGCCACGGCTCCCGCG
CTCGCGCATGGTGTTGTCGGTGGGATCAGCGGCACCGGGGCGGGCGGGGA
CGGGGTGTCCACGGCTATGCGGGCCACCCCCAGCCCTATCCAAGACCCAT
CGATGAACGAGACGTGCGAAAAGGGTGCAACATGGACGTTACCACTAGGC
TTAGAGGAGCTCCAACACAGCCTCGAGTCGCTACCTCTTCACAGCAAAAC
GAAGGTTTGGGTCGAAATTGGGGGGATCGAGGCCTCTGATCGCTCGTTAT
GGATATGCTTCCCTAGCCCATGTCTGCCTAACAATGCTTTCAACGAGAGT
GCTGGGGGATCGAGGCCTCTGATCGCTCGTTATGGATATGCTTCCCTAGC
CCATGTCTGCCTAACAATGCTTTCAACGAGAGTGCTCTCAAGGAGGGCCT
ATCTGCGCTCATGCAGCACCCGACGTTTCTGGCAGCTCTGATCGCCCACG
GCCAAGGGAAAGGCGCGCCGGTCGCTTCGAGCGCCTCAAACGAGGAGACT
CCTGGGGTGAGACCAACCGATGTCGCCGACGGCGCCATCTCGCCTGATCG
CGCGATATCAAACAACGAAGGAAATACATCTAGGGCGCGCTCTCCGACAC
AGAACGCCGAAGAGGGTTGCGAATCGGTATCCGCGAACAGTGGCAGCGGC
AAGACCAGCAGTAGTAGCAGCAGTAGCAACGGGGCAGGTAGCGGGGGTAC
GGGGAGCGGCGGCTGTTGCCCCAGTCGGTCACAGAATCGGGGAGAGTTCG
GCGGGCGCTTACCGAGGTCGGAAGAGGCTTGTGCGTAACTCAAGGAGGGC
CTATCTGCGCTCATGCAGCACCCGACGTTTCTGGCAGCTCTGATCGCCCA
CGGCCAAGGGAAAGGCGCGCCGGTCGCTTCGAGCGCCTCAAACGAGGAGA
CTCCTGGGGTGAGACCAACCGATGTCGCCGACGGCGCCATCTCGCCTGAT
CGCGCGATATCAAACAACGAAGGAAATACATCTAGGGCGCGCTCTCCGAC
ACAGAACGCCGAAGAGGGTTGCGAATCGGTATCCGCGAACAGTGGCAGCG
GCAAGACCAGCAGTAGTAGCAGCAGTAGCAACGGGGCAGGTAGCGGGGGT
ACGGGGAGCGGCGGCTGTTGCCCCAGTCGGTCACAGAATCGGGGAGAGTT
CGGCGGGCGCTTACCGAGGTCGGAAGAGGCTTGTGCGTAA
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