mRNA_H-elongata_contig17343.4499.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig17343.4499.1 vs. uniprot
Match: D7FQ49_ECTSI (HECT-type E3 ubiquitin transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ49_ECTSI) HSP 1 Score: 430 bits (1106), Expect = 5.560e-147 Identity = 207/238 (86.97%), Postives = 221/238 (92.86%), Query Frame = 1
Query: 286 EAESNRVLVEIKTLSTRSRRLLRAMPFCMSLTRRMRVFEHLVKADKARHQPENSPGVPLRIRRGHVLEDGLAALGSGGRVDDQMKRRLTVAYTSTAGHEESGIDMGGLFKDFWTDLSALAFDVNYGLFRQGGREGLMYPNPTSAMVHGSEHLRLFEFLGRILGKALYEGITVQPEFATFFLGFIRGDYNFLHLFHDLNGLDPELYRNLMFLKTYDGGDVEDLCLTFTVADEAFGMNRE 999
+AESNRVL E+KT STRSRRLL AMP+CMSLT+RMRVFEHLVKADK RHQPEN+PGVP+R+RRGHVLEDGLAALGSGGR + Q KRRL V YT AGHEESGIDMGGLFKDFWTDLSALAFD+NYGLFR +EGLMYPNP+S MVHGSEHLRLF+FLGRILGKALYEGITVQPEFATFFLGFIRGDYNFLHLFHDL+GLDPELYRNLMFLKTYDGGDVEDLCLTFTVADE FG N+E
Sbjct: 20 KAESNRVLAEVKTQSTRSRRLLHAMPYCMSLTQRMRVFEHLVKADKQRHQPENTPGVPIRVRRGHVLEDGLAALGSGGRAEGQTKRRLIVMYTGAAGHEESGIDMGGLFKDFWTDLSALAFDINYGLFRVT-KEGLMYPNPSSGMVHGSEHLRLFQFLGRILGKALYEGITVQPEFATFFLGFIRGDYNFLHLFHDLHGLDPELYRNLMFLKTYDGGDVEDLCLTFTVADEEFGANKE 256
BLAST of mRNA_H-elongata_contig17343.4499.1 vs. uniprot
Match: A0A7S1VV74_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VV74_9STRA) HSP 1 Score: 303 bits (775), Expect = 5.490e-95 Identity = 161/349 (46.13%), Postives = 223/349 (63.90%), Query Frame = 1
Query: 4 CCLFGHLLVVLDDADLYDKGRPLPLHHLRLVVKGLKRPLF-AFYWEEKARQDPPFSIRRDHFGTFYAGSAERLLRGLYARSSRRALCPSEAWVVPEAESNRVLVEIKTLSTR----SRRLLRAMPFCMSLTRRMRVFEHLVKADKARHQPENS-----------PGVPLRIRRGHVLEDGLAALGSGGRVDDQMKRRLTVAYTSTAGHEESGIDMGGLFKDFWTDLSALAFDVNYGLFR-QGGREGLMYPNPTSAMVHGSEHLRLFEFLGRILGKALYEGITVQPEFATFFLGFIRGDYNFLHLFHDLNGLDPELYRNLMFLKTYDGGDVEDLCLTFTVADEAFGMNRE 999
CCL H L + DD +++D G+PLP+H +R ++ LK+ L A +E+++ I ++FG +A + +R LY RSSRR C W+V ++ + KT S S + R PF +S RR+++FE LV ++ Q +++ PG+P+RI RG VLEDGLA + G+ +M+ R+ V Y + AG +E+GID+GGLFK+FWTDL +AFD NY LFR G MYPNP S HGS+H+ LFEFLGRILGK++YE IT+ P+FA FFL F+RGDYNFLH+ DL+ +DP+LY NLMFLKTY+G D EDLCLTF++ ++ FG NRE
Sbjct: 77 CCLL-HTLTITDDVEIHDFGKPLPIHQIRREIQVLKKLLLRACCLDEESKG----RIESNYFGRALTAAAAKTMRDLYDRSSRRPFCSPSLWLVDGLMDGQIK-KCKTFSEYESLLSMPVFRICPFLVSFKRRLKLFERLVTTNRIEIQGQHNMNPFSNDPGLKPGIPVRIMRGRVLEDGLATMNKLGK---RMRERIVVHYLNEAGAQEAGIDVGGLFKEFWTDLCQVAFDPNYALFRVTEGAGNCMYPNPASFSAHGSDHVTLFEFLGRILGKSMYEMITISPKFAHFFLSFLRGDYNFLHMLPDLSTMDPQLYNNLMFLKTYEG-DAEDLCLTFSITNDDFGGNRE 415
BLAST of mRNA_H-elongata_contig17343.4499.1 vs. uniprot
Match: A0A835Z958_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z958_9STRA) HSP 1 Score: 292 bits (747), Expect = 7.270e-93 Identity = 149/244 (61.07%), Postives = 182/244 (74.59%), Query Frame = 1
Query: 292 ESNRVLVEIKTLSTRSRRLLRAMPFCMSLTRRMRVFEHLVKADKARHQPENSPGVPLRIRRGHVLEDGLAALGSGGRVDDQMKRRLTVAYTSTAGHEESGIDMGGLFKDFWTDLSALAFDVNYGLFRQGGREGLMYPNPTSAMVHGSEHLRLFEFLGRILGK--------ALYEGITVQPEFATFFLGFIRGDYNFLHLFHDLNGLDPELYRNLMFLKTYDGGDVEDLCLTFTVADEAFGMNRE 999
+S+R L +++ + R++ LL AMP+ + L R+R F L A +ARHQPEN+PG+ +R+RRG LEDGLAA+ R+ QM++RL V YTS GH+ESGID+GGLFKDFW DLSA AFD GLFRQ R GL+YPNP S +H ++HLRLFEFLG +LGK AL EGITVQP+FATFFLGF+RG Y+FL+LFHDL GLD ELYRNL+FLK YDG VE LCL+FTV DEAFG RE
Sbjct: 4 QSSRALSQVRAQTPRAQALLAAMPWALPLAERVRAFAALAAAVRARHQPENTPGITIRVRRGRALEDGLAAMD---RLRGQMRKRLQVVYTSALGHQESGIDLGGLFKDFWVDLSAAAFDPARGLFRQT-RAGLLYPNPASGALH-ADHLRLFEFLGAVLGKXXXXXXXXALLEGITVQPQFATFFLGFMRGGYDFLNLFHDLAGLDEELYRNLIFLKKYDGDGVETLCLSFTVTDEAFGAARE 242
BLAST of mRNA_H-elongata_contig17343.4499.1 vs. uniprot
Match: A0A7S4JH00_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JH00_9STRA) HSP 1 Score: 303 bits (776), Expect = 3.750e-90 Identity = 161/337 (47.77%), Postives = 216/337 (64.09%), Query Frame = 1
Query: 19 HLLVVLDDADLYDKGRPLPLHHLRLVVKGLKRPLFAFYWEEKARQDPPFS-IRRDHFGTFYAGSAERLLRGLYARSSRRALCPSEAWVVP---EAESNRVLVEIKTLSTRSRRLLRAMPFCMSLTRRMRVFEHLVKADKARHQPENS-----PGVPLRIRRGHVLEDGLAALGSGGRVDDQMKRRLTVAYTSTAGHEESGIDMGGLFKDFWTDLSALAFDVNYGLFRQG-GREGLMYPNPTSAMVHGSEHLRLFEFLGRILGKALYEGITVQPEFATFFLGFIRGDYNFLHLFHDLNGLDPELYRNLMFLKTYDGGDVEDLCLTFTVADEAFGMNRE 999
H+L+V DD ++++ +PLP H LR + LK+ L+ + D + + ++FG +A + ++ LY RSSRR LC + W+V E + R +S S +LR PF +S RR+++FE +V D+ Q N PGV +RI R VLEDGL L + GR M++R+ V Y + AG E+G+D+GGLFK+FWTDLS LAFD NY LFR G +YPNP+SA HG +H+ LFEFLGRILGKALYEGIT+QP+FA FL F+RGDYNFLH+ DL+ +DP+LY NLMFLKTY+G D DLCLTF VA++ FG N+E
Sbjct: 802 HILIVTDDVEIHEMQKPLPKHQLRRCILLLKKLLYRACCTDADVADTECNTMESNYFGLALISAASKAMKDLYDRSSRRPLCIPKLWLVEDLLEKDIRRCKSHHDFVSLLSAPVLRVCPFLVSFKRRLKLFERIVTTDRINIQGSNEQHNLKPGVVVRIMRNRVLEDGLMTLNNLGR---NMRQRIVVQYLNQAGATETGVDVGGLFKEFWTDLSGLAFDQNYALFRATEGSGNCLYPNPSSAAAHGVDHIVLFEFLGRILGKALYEGITIQPQFAHLFLSFLRGDYNFLHMLPDLSTIDPQLYNNLMFLKTYEG-DAADLCLTFAVANDDFGGNKE 1134
BLAST of mRNA_H-elongata_contig17343.4499.1 vs. uniprot
Match: A0A1Z5K3Y9_FISSO (HECT-type E3 ubiquitin transferase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K3Y9_FISSO) HSP 1 Score: 299 bits (765), Expect = 3.860e-90 Identity = 158/344 (45.93%), Postives = 212/344 (61.63%), Query Frame = 1
Query: 10 LFGHLLVVLDDADLYDKGRPLPLHHLRLVVKGLKRPLFAFYWEEKARQDPPFSIRRDHFGTFYAGSAERLLRGLYARSSRRALCPSEAWVVP---EAESNRVLVEIKTLSTRSRRLLRAMPFCMSLTRRMRVFEHLVKADKARHQPENS----------PGVPLRIRRGHVLEDGLAALGSGGRVDDQMKRRLTVAYTSTAGHEESGIDMGGLFKDFWTDLSALAFDVNYGLFR-QGGREGLMYPNPTSAMVHGSEHLRLFEFLGRILGKALYEGITVQPEFATFFLGFIRGDYNFLHLFHDLNGLDPELYRNLMFLKTYDGGDVEDLCLTFTVADEAFGMNRE 999
L GH+L+V DD +LYD +PLPLH +R ++ LK+ L+ D + +FG ++ R ++ LY RSSRR LC + W+V E+E S +LR PF +S RR+++FE ++ + Q N G+P+RI RG +LEDGLA + + G M++R+ V Y + AG E+G+D GGLFK+FWTDL A+AFD NY LFR G MYPNP+SA HG++H+ LFEFLGRILGKAL+EGIT+ P FA FFL F+RGDYN+LH+ DL+ +DP+LY NLMFLKTYDG D DLCL+FTV + FG +E
Sbjct: 463 LLGHVLIVTDDVELYDMDKPLPLHQIRQCIQFLKKLLYRAC----CLDDLSIAQSSTYFGLALITASSRAMKDLYDRSSRRPLCTPKLWIVSDLMESEIRSCKRHEDFTSLLHLPVLRLCPFLVSFKRRLKLFECIITTSRIEIQGVNDGNPFNTNPLKQGIPVRITRGRILEDGLATMNNLG---SNMRQRIVVNYYNEAGVRETGVDAGGLFKEFWTDLCAIAFDPNYALFRVTDGAGDCMYPNPSSAAAHGTDHITLFEFLGRILGKALFEGITIHPRFAHFFLSFLRGDYNYLHMLPDLSTVDPQLYNNLMFLKTYDG-DARDLCLSFTVTTDDFGGTKE 798
BLAST of mRNA_H-elongata_contig17343.4499.1 vs. uniprot
Match: A0A7S2UH98_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UH98_9STRA) HSP 1 Score: 302 bits (773), Expect = 1.200e-89 Identity = 164/343 (47.81%), Postives = 215/343 (62.68%), Query Frame = 1
Query: 7 CLFGHLLVVLDDADLYDKGRPLPLHHLRLVVKGLKRPLFAFYWEEKARQDPPFS---IRRDHFGTFYAGSAERLLRGLYARSSRRALCPSEAWVVP---EAESNRVLVEIKTLSTRSRRLLRAMPFCMSLTRRMRVFEHLVKADKARHQPENS-----PGVPLRIRRGHVLEDGLAALGSGGRVDDQMKRRLTVAYTSTAGHEESGIDMGGLFKDFWTDLSALAFDVNYGLFRQG-GREGLMYPNPTSAMVHGSEHLRLFEFLGRILGKALYEGITVQPEFATFFLGFIRGDYNFLHLFHDLNGLDPELYRNLMFLKTYDGGDVEDLCLTFTVADEAFGMNRE 999
CL H+L++ DD +++D RPLP H LR ++ LKR L+ + S ++FG S+ R +R LY RSSRR LC + W++ E + R + S S +LR PF +S RR+R+FE +V ++ Q N PG + I RG +LEDGL L GR +++RL V Y + AG E+G+D+GGLFK+FWTDLS +AFD N+ LFR G MYPNP+S HGS+ + LFEFLGRILGKALYEGIT+QP+FA FFL F+RGDYNFLH+ DL+ +DP+LY NLMFLKTY+G D DLCLTFTVA++ FG N E
Sbjct: 830 CL-SHVLIITDDIEIHDMDRPLPPHQLRRIILLLKRLLYRACCVDDVHASSGVSRSISNSNYFGLSLISSSSRTMRDLYDRSSRRPLCTPKMWLIEDLLEKDLKRCKRYDQFASLLSTPVLRVCPFLVSFKRRLRLFERIVTTNRIEIQGSNQLQNLKPGKIVHITRGRILEDGLLHLNHLGR---NLRQRLVVQYLNEAGAREAGVDVGGLFKEFWTDLSNMAFDPNFALFRATEGAGNCMYPNPSSLQAHGSDSIVLFEFLGRILGKALYEGITIQPQFAHFFLSFLRGDYNFLHMLPDLSTMDPQLYNNLMFLKTYEG-DAADLCLTFTVANDDFGRNDE 1167
BLAST of mRNA_H-elongata_contig17343.4499.1 vs. uniprot
Match: A0A6A3QSI4_9STRA (HECT-type E3 ubiquitin transferase n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3QSI4_9STRA) HSP 1 Score: 290 bits (743), Expect = 4.970e-89 Identity = 153/335 (45.67%), Postives = 214/335 (63.88%), Query Frame = 1
Query: 4 CCLFGHLLVVLDDADLYDKGRPLPLHHLRLVVKGLKRPLFAFYWEEKARQDPPFSIRRDHFGTFYAGSAERLLRGLYARSSRRALCPSEAWVVPEAESNRVLVEIKTLSTRSRRLLRAMPFCMSLTRRMRVFEHLVKADKARHQPENSPGVPLRIRRGHVLEDGLAALGSGGRVDDQMKRRLTVAYTSTAGHEESGIDMGGLFKDFWTDLSALAFDVNYGLFRQGGREGLMYPNPTSAMVH---GSEHLRLFEFLGRILGKALYEGITVQPEFATFFLGFIRGDYNFLHLFHDLNGLDPELYRNLMFLKTYDGGDVEDLCLTFTVADEAFGMNRE 999
C + HLL+V+DD ++Y+K PLPL + +V LKR L YW S+ FG F A RL+R LY R SR+ C +W++ E +SN+++ E+ + R+ +L+++MP+ + R+++F+ L+KADK HQ E+ +RI RG +LEDGL L S + +K+R+ V + ++AG EE GID GGLFK+FW DLS LAFD+ YGLF + L+YPNP SA H S+HL +F+F+GRILGKALYEGI VQP+FA FFL + +N L+ +L LDPE+Y+NLMFLK+Y+G DVEDL LT TV + FG +E
Sbjct: 210 CMTYEHLLIVMDDEEMYEKEYPLPLCQIERIVLSLKRALHEAYWTYANLAPSSESVA---FGMFVVEMATRLMRVLYNRCSRQPFCNVTSWIIAELDSNQLIEEVLLGTPRANKLIQSMPYLVPFPDRVKLFQRLIKADKEIHQSESCSVYRIRIHRGAILEDGLRKLNS---IRTNLKKRINVVFVNSAGREEVGIDAGGLFKEFWLDLSTLAFDLQYGLFLTT-HDQLLYPNPNSASSHFSRESDHLTMFQFVGRILGKALYEGIVVQPKFAHFFLSKLLHSFNQLN---ELPSLDPEIYKNLMFLKSYEG-DVEDLGLTHTVVQDVFGEQKE 533
BLAST of mRNA_H-elongata_contig17343.4499.1 vs. uniprot
Match: A0A8J4S0Z1_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Phytophthora kernoviae 00238/432 TaxID=1284355 RepID=A0A8J4S0Z1_9STRA) HSP 1 Score: 289 bits (739), Expect = 5.410e-89 Identity = 156/335 (46.57%), Postives = 211/335 (62.99%), Query Frame = 1
Query: 4 CCLFGHLLVVLDDADLYDKGRPLPLHHLRLVVKGLKRPLFAFYWEEKARQDPPFSIRRDHFGTFYAGSAERLLRGLYARSSRRALCPSEAWVVPEAESNRVLVEIKTLSTRSRRLLRAMPFCMSLTRRMRVFEHLVKADKARHQPENSPGVPLRIRRGHVLEDGLAALGSGGRVDDQMKRRLTVAYTSTAGHEESGIDMGGLFKDFWTDLSALAFDVNYGLFRQGGREGLMYPNPTSAMVH---GSEHLRLFEFLGRILGKALYEGITVQPEFATFFLGFIRGDYNFLHLFHDLNGLDPELYRNLMFLKTYDGGDVEDLCLTFTVADEAFGMNRE 999
C + HLLVV+DD ++Y+ PLPL + +V LKR L YW S+ FG F A RL+R LY R SR+ +W+ E +SN+++ E+ + R+ +L+++MP+ + R+++F+ LVKADK HQ EN +RI RG +LEDGL L + + +K+R+ V + ++AG EE GID GGLFK+FW DLS LAFD+ YGLF + L+YPNP SA H S+HL LF+F+GRILGKALYEGI VQP+FA FFL + +N L+ +L LDPE+Y+NLMFLK+YDG DVEDL LT TV E FG +E
Sbjct: 38 CMAYNHLLVVMDDEEMYELEYPLPLRQIERIVLALKRALHDAYWTHANLAPSTDSVA---FGVFVVDMATRLMRLLYNRCSRQPFTNVTSWISAELDSNQLIEEVLQGTPRANKLIQSMPYLVPFPDRVKLFQRLVKADKEIHQSENCSVYRIRINRGAILEDGLRKLNT---IRTNLKKRINVVFVNSAGREEVGIDAGGLFKEFWLDLSTLAFDLQYGLFLTT-HDQLLYPNPNSASGHFSRESDHLTLFQFVGRILGKALYEGIVVQPKFAHFFLSKLLHSFNQLN---ELPSLDPEIYKNLMFLKSYDG-DVEDLGLTHTVVKEVFGEQKE 361
BLAST of mRNA_H-elongata_contig17343.4499.1 vs. uniprot
Match: A0A5D6XUH3_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XUH3_9STRA) HSP 1 Score: 297 bits (760), Expect = 1.160e-88 Identity = 158/340 (46.47%), Postives = 214/340 (62.94%), Query Frame = 1
Query: 4 CCLFGHLLVVLDDADLYDKGRPLPLHHLRLVVKGLKRPLFAFYW-----EEKARQDPPFSIRRDHFGTFYAGSAERLLRGLYARSSRRALCPSEAWVVPEAESNRVLVEIKTLSTRSRRLLRAMPFCMSLTRRMRVFEHLVKADKARHQPENSPGVPLRIRRGHVLEDGLAALGSGGRVDDQMKRRLTVAYTSTAGHEESGIDMGGLFKDFWTDLSALAFDVNYGLFRQGGREGLMYPNPTSAMVH---GSEHLRLFEFLGRILGKALYEGITVQPEFATFFLGFIRGDYNFLHLFHDLNGLDPELYRNLMFLKTYDGGDVEDLCLTFTVADEAFGMNRE 999
C + HLLVVLDD ++YD PLPL + VV LKR L A YW + P + FG F A LLR LY R SR C +W++P+ +S++++ E+ + R+ +L+ +MP+ + R+++F+ LVKADK HQ + S +RIRRG VLEDGLA L + +K+RL V + + AG EE GID GGLFK+FW DL+ LAFD+ YGLF G + L+YPNP SA H S+HL LF+F+GR+LGKALYEGI V+P+FA FFL + +N L+ DL LDP++Y+NLMFLKTY+G D+EDL LT T+ + FG +E
Sbjct: 604 CLTYHHLLVVLDDEEMYDDEFPLPLFQVERVVLSLKRALHAAYWVHGLAHSSSDPTPEPAAALVGFGKFVIDGATNLLRDLYNRCSRHPFCNVTSWIIPDMDSSQLIDEVLVGTPRANKLIASMPYLLPFPDRVKLFQRLVKADKEAHQGDGSAVYRIRIRRGMVLEDGLAKLNG---IQSNLKKRLNVVFVNAAGREEVGIDAGGLFKEFWLDLAKLAFDLQYGLFLSTGDQ-LLYPNPFSASGHFARESDHLTLFQFVGRVLGKALYEGIVVEPKFAHFFLSKLLHAFNHLN---DLPSLDPDIYKNLMFLKTYEG-DIEDLGLTHTIVQDVFGDQKE 935
BLAST of mRNA_H-elongata_contig17343.4499.1 vs. uniprot
Match: A0A1Z5JJN8_FISSO (HECT-type E3 ubiquitin transferase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JJN8_FISSO) HSP 1 Score: 296 bits (759), Expect = 7.910e-88 Identity = 157/348 (45.11%), Postives = 215/348 (61.78%), Query Frame = 1
Query: 10 LFGHLLVVLDDADLYDKGRPLPLHHLRLVVKGLKRPLFAFYWEEKARQDPPFSIRRDHFGTFYAGSAERLLRGLYARSSRRALCPSEAWVVPEAESNRVLVEIKTL-------STRSRRLLRAMPFCMSLTRRMRVFEHLVKADKARHQPENS----------PGVPLRIRRGHVLEDGLAALGSGGRVDDQMKRRLTVAYTSTAGHEESGIDMGGLFKDFWTDLSALAFDVNYGLFR-QGGREGLMYPNPTSAMVHGSEHLRLFEFLGRILGKALYEGITVQPEFATFFLGFIRGDYNFLHLFHDLNGLDPELYRNLMFLKTYDGGDVEDLCLTFTVADEAFGMNRE 999
L GH+L+V DD +LYD +PLP+H +R ++ LK+ L+ D + FG ++ + ++ LY RSSRR LC + W+V + + EI++ S + +LR PF +S RR+++FE ++ + Q N G+P+RI RG +LEDGLA + + G M++R+ V Y + AG E+G+D GGLFK+FWTDL A+AFD NY LFR G MYPNP+SA HGS+H+ LFEFLGRILGKAL+EGIT+ P FA FFL F+RGDYN+LH+ DL+ +DP+LY NLMFLKTYDG D DLCL+FTV + FG +E
Sbjct: 785 LLGHVLIVTDDVELYDMDKPLPIHQIRRCIQLLKKLLYRAC----CLDDLSVAQNSTFFGLALITASSKAMKDLYDRSSRRPLCTPKLWIVSDLMES----EIRSCKRHGDFSSLLNLPVLRICPFLVSFKRRLKLFECIITTSRIEIQGVNDVNPFNTNPLKKGIPVRITRGRILEDGLATMNNLG---SNMRQRIVVNYYNEAGVRETGVDAGGLFKEFWTDLCAIAFDPNYALFRVTDGAGDCMYPNPSSAAAHGSDHITLFEFLGRILGKALFEGITIHPRFAHFFLSFLRGDYNYLHMLPDLSTVDPQLYNNLMFLKTYDG-DARDLCLSFTVTTDDFGGTKE 1120 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17343.4499.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig17343.4499.1 >prot_H-elongata_contig17343.4499.1 ID=prot_H-elongata_contig17343.4499.1|Name=mRNA_H-elongata_contig17343.4499.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=334bp MCCLFGHLLVVLDDADLYDKGRPLPLHHLRLVVKGLKRPLFAFYWEEKARback to top mRNA from alignment at H-elongata_contig17343:565..6116+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig17343.4499.1 ID=mRNA_H-elongata_contig17343.4499.1|Name=mRNA_H-elongata_contig17343.4499.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5552bp|location=Sequence derived from alignment at H-elongata_contig17343:565..6116+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig17343:565..6116+ >mRNA_H-elongata_contig17343.4499.1 ID=mRNA_H-elongata_contig17343.4499.1|Name=mRNA_H-elongata_contig17343.4499.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2004bp|location=Sequence derived from alignment at H-elongata_contig17343:565..6116+ (Himanthalia elongata Himel1 dioecious)back to top |