prot_H-elongata_contig17334.4495.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig17334.4495.1
Unique Nameprot_H-elongata_contig17334.4495.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length139
Homology
BLAST of mRNA_H-elongata_contig17334.4495.1 vs. uniprot
Match: A0A6H5L117_9PHAE (Intraflagellar transport protein 122 homolog n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L117_9PHAE)

HSP 1 Score: 225 bits (573), Expect = 6.590e-69
Identity = 105/138 (76.09%), Postives = 119/138 (86.23%), Query Frame = 0
Query:    1 MKPELSWSDQIPEREDTSKSNSINDLCFSPDGSRLVVAVESRVLVYNGTDGELLHSLRGHKDRVYTVSYSKDGNQFASGGADHTVIIWTSNAEGVLKYTHNESITRIAFSPGTANLASCTQLDFGLWGRDHKSVAKHK 138
            MK E+SWSDQ+PERED  KSN+INDLCFSPDGS+L+VAVE RVLVY+   GEL++SLRGHKD V+TV Y+KDG  FASGGADHTVIIWTS AEGVLKYTHNESI R+A+SPGT  LASCTQ DFGLW ++ KSV KHK
Sbjct:    1 MKSEVSWSDQVPEREDKPKSNAINDLCFSPDGSKLIVAVECRVLVYDAAKGELVNSLRGHKDTVFTVDYAKDGKHFASGGADHTVIIWTSKAEGVLKYTHNESIIRLAYSPGTTKLASCTQFDFGLWRQEQKSVVKHK 138          
BLAST of mRNA_H-elongata_contig17334.4495.1 vs. uniprot
Match: D7FXW9_ECTSI (Intraflagellar transport protein 122 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXW9_ECTSI)

HSP 1 Score: 228 bits (582), Expect = 8.980e-67
Identity = 107/139 (76.98%), Postives = 121/139 (87.05%), Query Frame = 0
Query:    1 MKPELSWSDQIPEREDTSKSNSINDLCFSPDGSRLVVAVESRVLVYNGTDGELLHSLRGHKDRVYTVSYSKDGNQFASGGADHTVIIWTSNAEGVLKYTHNESITRIAFSPGTANLASCTQLDFGLWGRDHKSVAKHKV 139
            MK E+SWSDQ+PERED  KSN+INDLCFSPDGS+L+VAVESRVLVY+  +GEL++SLRGHKD V TV Y+KDG  FASGGADHTVIIWTS AEGVLKYTHNESI R+A+SPGT  LASCTQ DFGLW ++ KSV KHKV
Sbjct:    1 MKSEVSWSDQVPEREDKPKSNAINDLCFSPDGSKLIVAVESRVLVYDAAEGELVNSLRGHKDTVLTVDYAKDGKHFASGGADHTVIIWTSKAEGVLKYTHNESIIRLAYSPGTTKLASCTQFDFGLWRQEQKSVVKHKV 139          
BLAST of mRNA_H-elongata_contig17334.4495.1 vs. uniprot
Match: A0A835ZL39_9STRA (Intraflagellar transport protein 122 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL39_9STRA)

HSP 1 Score: 185 bits (469), Expect = 1.510e-51
Identity = 92/141 (65.25%), Postives = 108/141 (76.60%), Query Frame = 0
Query:    1 MKPELSWSDQIPEREDTSKSNSINDLCFSPDGSRLVVAVESRVLVYNGTDGE--LLHSLRGHKDRVYTVSYSKDGNQFASGGADHTVIIWTSNAEGVLKYTHNESITRIAFSPGTANLASCTQLDFGLWGRDHKSVAKHKV 139
            MKPEL W+D +P RED  +   INDLCFSPDG++LVVA  SR+LVY+   GE  L HSLRGHKD VYTV YS DG +FASGGAD TVI+WTS AEG+LKYTH +SI R+A++P    LASCT +DFGLW +D KSV K KV
Sbjct:    1 MKPELVWTDHVPPRED--QHIGINDLCFSPDGTQLVVAAGSRILVYDVQGGEVDLQHSLRGHKDTVYTVDYSSDGKRFASGGADKTVIVWTSKAEGILKYTHGDSIQRVAYNPCANVLASCTGIDFGLWSQDQKSVNKQKV 139          
BLAST of mRNA_H-elongata_contig17334.4495.1 vs. uniprot
Match: A0A2P4XSI5_9STRA (Intraflagellar transport protein 122 homolog n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XSI5_9STRA)

HSP 1 Score: 174 bits (440), Expect = 1.820e-51
Identity = 83/139 (59.71%), Postives = 103/139 (74.10%), Query Frame = 0
Query:    1 MKPELSWSDQIPEREDTSKSNSINDLCFSPDGSRLVVAVESRVLVYNGTDGELLHSLRGHKDRVYTVSYSKDGNQFASGGADHTVIIWTSNAEGVLKYTHNESITRIAFSPGTANLASCTQLDFGLWGRDHKSVAKHKV 139
            M+  L+WSD++PER    +   + DL F PDGS +V AV +RVLVY+  DG LLHSL+GHK  VY V YS DG +FASGGAD+ VIIWT  AEG+LKYTHN+SI ++A++P +  LASCT  DFGLW  + KSVAKHKV
Sbjct:    1 MRSVLAWSDKVPER--NGEKFVVQDLAFRPDGSHVVAAVGTRVLVYDAVDGTLLHSLKGHKGTVYAVDYSHDGKRFASGGADNIVIIWTDKAEGILKYTHNDSIQKLAYNPQSQCLASCTASDFGLWAPEQKSVAKHKV 137          
BLAST of mRNA_H-elongata_contig17334.4495.1 vs. uniprot
Match: A0A485KGT5_9STRA (Intraflagellar transport protein 122 homolog n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KGT5_9STRA)

HSP 1 Score: 174 bits (440), Expect = 1.260e-49
Identity = 79/139 (56.83%), Postives = 105/139 (75.54%), Query Frame = 0
Query:    1 MKPELSWSDQIPEREDTSKSNSINDLCFSPDGSRLVVAVESRVLVYNGTDGELLHSLRGHKDRVYTVSYSKDGNQFASGGADHTVIIWTSNAEGVLKYTHNESITRIAFSPGTANLASCTQLDFGLWGRDHKSVAKHKV 139
            M+  L+WSD++P+R        + D+ F PDGS++V A+ SRV++Y+  +G LLHSL+GHKD VYTV ++ DG +FASGGAD+ VIIWT  AEG+LKYTHNESI ++A++P +  LASCT  DFGLW  + KSVAKHKV
Sbjct:    1 MRTTLAWSDKVPDRNGVKVV--VQDIAFHPDGSQIVAAIGSRVMIYDAVNGTLLHSLKGHKDTVYTVDFAHDGKRFASGGADNVVIIWTDKAEGILKYTHNESIQKVAYNPQSQCLASCTASDFGLWSPEQKSVAKHKV 137          
BLAST of mRNA_H-elongata_contig17334.4495.1 vs. uniprot
Match: A0A1V9ZAP5_9STRA (Intraflagellar transport protein 122 homolog (Fragment) n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZAP5_9STRA)

HSP 1 Score: 178 bits (451), Expect = 3.970e-49
Identity = 81/139 (58.27%), Postives = 107/139 (76.98%), Query Frame = 0
Query:    1 MKPELSWSDQIPEREDTSKSNSINDLCFSPDGSRLVVAVESRVLVYNGTDGELLHSLRGHKDRVYTVSYSKDGNQFASGGADHTVIIWTSNAEGVLKYTHNESITRIAFSPGTANLASCTQLDFGLWGRDHKSVAKHKV 139
            M+  L+WSD++P+R  T     + D+ F PDG++LV A+ +RV++Y+ T+G LLHSL+GHKD VYTV Y+ DG +FASGGAD+ VIIWT  AEG+LKYTHNESI ++A++P +  LASCT  DFGLW  + KSVAKHKV
Sbjct:    1 MRTNLAWSDKVPDRNGTKVV--VQDVAFHPDGTQLVAAIGNRVMIYDATNGTLLHSLKGHKDTVYTVDYAHDGKRFASGGADNVVIIWTDKAEGILKYTHNESIQKVAYNPQSQCLASCTAADFGLWSPEQKSVAKHKV 137          
BLAST of mRNA_H-elongata_contig17334.4495.1 vs. uniprot
Match: A0A067CAX3_SAPPC (Intraflagellar transport protein 122 homolog n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CAX3_SAPPC)

HSP 1 Score: 177 bits (448), Expect = 1.020e-48
Identity = 81/139 (58.27%), Postives = 105/139 (75.54%), Query Frame = 0
Query:    1 MKPELSWSDQIPEREDTSKSNSINDLCFSPDGSRLVVAVESRVLVYNGTDGELLHSLRGHKDRVYTVSYSKDGNQFASGGADHTVIIWTSNAEGVLKYTHNESITRIAFSPGTANLASCTQLDFGLWGRDHKSVAKHKV 139
            M+  L+WSD++P+R        + DL F PDGS+LV A+ +RV++Y+ T+G LLHSL+GHKD VYTV Y+ DG +FASGGAD+ VIIWT  AEG+LKYTHNESI ++ ++P +  LASCT  DFGLW  + KSVAKHKV
Sbjct:    1 MRTNLAWSDKVPDRNGAKVV--VQDLAFHPDGSQLVAAIGNRVMIYDATNGTLLHSLKGHKDTVYTVDYAHDGKRFASGGADNVVIIWTDKAEGILKYTHNESIQKVVYNPQSQCLASCTAADFGLWSPEQKSVAKHKV 137          
BLAST of mRNA_H-elongata_contig17334.4495.1 vs. uniprot
Match: A0A2D4CF33_PYTIN (BTB domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CF33_PYTIN)

HSP 1 Score: 175 bits (444), Expect = 2.460e-48
Identity = 83/139 (59.71%), Postives = 105/139 (75.54%), Query Frame = 0
Query:    1 MKPELSWSDQIPEREDTSKSNSINDLCFSPDGSRLVVAVESRVLVYNGTDGELLHSLRGHKDRVYTVSYSKDGNQFASGGADHTVIIWTSNAEGVLKYTHNESITRIAFSPGTANLASCTQLDFGLWGRDHKSVAKHKV 139
            M+  L+WSD++PER    +   + DL F PDGS+LV AV +RV+VY+  DG LLHSL+GHK  VYTV Y+ DG +FASGGAD+TVIIWT  AEG+LKYTHN+SI R+ ++P +  LASCT  DFGLW  + KSV+KHKV
Sbjct:    1 MRSVLAWSDKVPER--NGERFVVQDLAFRPDGSQLVAAVGTRVMVYDAVDGTLLHSLKGHKGVVYTVDYAHDGKRFASGGADNTVIIWTDKAEGILKYTHNDSIQRLVYNPQSQYLASCTASDFGLWAPEQKSVSKHKV 137          
BLAST of mRNA_H-elongata_contig17334.4495.1 vs. uniprot
Match: A0A2D4CG41_PYTIN (Intraflagellar transport protein 122 homolog n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CG41_PYTIN)

HSP 1 Score: 175 bits (444), Expect = 3.530e-48
Identity = 83/139 (59.71%), Postives = 105/139 (75.54%), Query Frame = 0
Query:    1 MKPELSWSDQIPEREDTSKSNSINDLCFSPDGSRLVVAVESRVLVYNGTDGELLHSLRGHKDRVYTVSYSKDGNQFASGGADHTVIIWTSNAEGVLKYTHNESITRIAFSPGTANLASCTQLDFGLWGRDHKSVAKHKV 139
            M+  L+WSD++PER    +   + DL F PDGS+LV AV +RV+VY+  DG LLHSL+GHK  VYTV Y+ DG +FASGGAD+TVIIWT  AEG+LKYTHN+SI R+ ++P +  LASCT  DFGLW  + KSV+KHKV
Sbjct:    1 MRSVLAWSDKVPER--NGERFVVQDLAFRPDGSQLVAAVGTRVMVYDAVDGTLLHSLKGHKGVVYTVDYAHDGKRFASGGADNTVIIWTDKAEGILKYTHNDSIQRLVYNPQSQYLASCTASDFGLWAPEQKSVSKHKV 137          
BLAST of mRNA_H-elongata_contig17334.4495.1 vs. uniprot
Match: A0A7S2B3U2_9STRA (Intraflagellar transport protein 122 homolog (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B3U2_9STRA)

HSP 1 Score: 166 bits (421), Expect = 4.020e-48
Identity = 79/140 (56.43%), Postives = 104/140 (74.29%), Query Frame = 0
Query:    1 MKPELSWSDQ-IPEREDTSKSNSINDLCFSPDGSRLVVAVESRVLVYNGTDGELLHSLRGHKDRVYTVSYSKDGNQFASGGADHTVIIWTSNAEGVLKYTHNESITRIAFSPGTANLASCTQLDFGLWGRDHKSVAKHKV 139
            M+  ++W D  +PER+     NS+ DL FS DG  LVVAV + VL+Y+  +G+LLH LRGHKD VY+V++ +DG +FASGGAD TVIIWT   +G+LKYTHN+SI ++ ++P T  LASCT  DFGLW ++ KSVAKHKV
Sbjct:    1 MRSTVNWEDPGLPERDGVQ--NSVQDLDFSRDGEILVVAVANLVLIYDAKEGDLLHRLRGHKDTVYSVAFVRDGTRFASGGADKTVIIWTRKGDGILKYTHNDSIQKVCYNPSTDQLASCTAQDFGLWSKEQKSVAKHKV 138          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17334.4495.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L117_9PHAE6.590e-6976.09Intraflagellar transport protein 122 homolog n=1 T... [more]
D7FXW9_ECTSI8.980e-6776.98Intraflagellar transport protein 122 homolog n=1 T... [more]
A0A835ZL39_9STRA1.510e-5165.25Intraflagellar transport protein 122 homolog n=1 T... [more]
A0A2P4XSI5_9STRA1.820e-5159.71Intraflagellar transport protein 122 homolog n=1 T... [more]
A0A485KGT5_9STRA1.260e-4956.83Intraflagellar transport protein 122 homolog n=1 T... [more]
A0A1V9ZAP5_9STRA3.970e-4958.27Intraflagellar transport protein 122 homolog (Frag... [more]
A0A067CAX3_SAPPC1.020e-4858.27Intraflagellar transport protein 122 homolog n=2 T... [more]
A0A2D4CF33_PYTIN2.460e-4859.71BTB domain-containing protein n=1 Tax=Pythium insi... [more]
A0A2D4CG41_PYTIN3.530e-4859.71Intraflagellar transport protein 122 homolog n=2 T... [more]
A0A7S2B3U2_9STRA4.020e-4856.43Intraflagellar transport protein 122 homolog (Frag... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 91..128
e-value: 230.0
score: 2.1
coord: 50..89
e-value: 2.6E-10
score: 50.3
coord: 9..47
e-value: 2.2
score: 14.8
IPR001680WD40 repeatPFAMPF00400WD40coord: 51..88
e-value: 8.6E-9
score: 35.9
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 57..88
score: 14.352
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 4..130
e-value: 6.5E-26
score: 92.8
IPR039857Intraflagellar transport protein 122 homologPANTHERPTHR12764WD REPEAT DOMAIN-RELATEDcoord: 1..139
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 16..98
score: 14.055
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 15..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17334contigH-elongata_contig17334:1142..2152 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17334.4495.1mRNA_H-elongata_contig17334.4495.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig17334 1142..2152 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig17334.4495.1 ID=prot_H-elongata_contig17334.4495.1|Name=mRNA_H-elongata_contig17334.4495.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=139bp
MKPELSWSDQIPEREDTSKSNSINDLCFSPDGSRLVVAVESRVLVYNGTD
GELLHSLRGHKDRVYTVSYSKDGNQFASGGADHTVIIWTSNAEGVLKYTH
NESITRIAFSPGTANLASCTQLDFGLWGRDHKSVAKHKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR039857Ift122
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf