prot_H-elongata_contig105422.449.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig105422.449.1
Unique Nameprot_H-elongata_contig105422.449.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length52
Homology
BLAST of mRNA_H-elongata_contig105422.449.1 vs. uniprot
Match: D7FYX6_ECTSI (Similar to activating transcription factor 6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYX6_ECTSI)

HSP 1 Score: 65.9 bits (159), Expect = 2.940e-11
Identity = 39/53 (73.58%), Postives = 44/53 (83.02%), Query Frame = 0
Query:    1 KPELAGLRGDAP-AECASKQVWKKQQRMIRNRESAALSRKRKRDRIESLEQQV 52
            KP+LA L+ +A  A    KQ WKKQQRMIRNRESAALSRKRKRD+IESLE+QV
Sbjct:  134 KPDLAMLQAEALLAPGVDKQAWKKQQRMIRNRESAALSRKRKRDKIESLEEQV 186          
BLAST of mRNA_H-elongata_contig105422.449.1 vs. uniprot
Match: A0A6H5JF82_9PHAE (BZIP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF82_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 8.090e-11
Identity = 38/53 (71.70%), Postives = 43/53 (81.13%), Query Frame = 0
Query:    1 KPELAGLRGDAP-AECASKQVWKKQQRMIRNRESAALSRKRKRDRIESLEQQV 52
            KP++A L+ +A  A    KQ WKKQQRMIRNRESAALSRKRKRD+IESLE QV
Sbjct:  133 KPDIAMLQAEALLAPGVDKQAWKKQQRMIRNRESAALSRKRKRDKIESLEDQV 185          
BLAST of mRNA_H-elongata_contig105422.449.1 vs. uniprot
Match: A0A4D9D9D1_9STRA (BZIP domain-containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9D1_9STRA)

HSP 1 Score: 48.5 bits (114), Expect = 3.930e-5
Identity = 29/46 (63.04%), Postives = 36/46 (78.26%), Query Frame = 0
Query:    7 LRGDAPAECASKQVWKKQQRMIRNRESAALSRKRKRDRIESLEQQV 52
            +R DA    A+  + KKQ RMIRNRESAALSRKRKRD++E+LE +V
Sbjct:  236 MRRDAEDMAAAVALTKKQLRMIRNRESAALSRKRKRDQVEALELEV 281          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig105422.449.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FYX6_ECTSI2.940e-1173.58Similar to activating transcription factor 6 n=1 T... [more]
A0A6H5JF82_9PHAE8.090e-1171.70BZIP domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A4D9D9D1_9STRA3.930e-563.04BZIP domain-containing protein n=4 Tax=Monodopsida... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 31..51
NoneNo IPR availableGENE3D1.20.5.170coord: 22..52
e-value: 3.2E-9
score: 38.6
NoneNo IPR availablePANTHERPTHR46164:SF3ATF6, ISOFORM Ccoord: 17..52
NoneNo IPR availablePANTHERPTHR46164FAMILY NOT NAMEDcoord: 17..52
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 21..52
IPR004827Basic-leucine zipper domainPFAMPF00170bZIP_1coord: 20..52
e-value: 1.1E-8
score: 35.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig105422contigH-elongata_contig105422:1857..2012 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig105422.449.1mRNA_H-elongata_contig105422.449.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig105422 1857..2012 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig105422.449.1 ID=prot_H-elongata_contig105422.449.1|Name=mRNA_H-elongata_contig105422.449.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=52bp
KPELAGLRGDAPAECASKQVWKKQQRMIRNRESAALSRKRKRDRIESLEQ
QV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP