prot_H-elongata_contig173028.4485.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig173028.4485.1
Unique Nameprot_H-elongata_contig173028.4485.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length41
Homology
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BLAST of mRNA_H-elongata_contig173028.4485.1 vs. uniprot
Match: D8LU01_ECTSI (GT23 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU01_ECTSI)

HSP 1 Score: 55.5 bits (132), Expect = 6.010e-8
Identity = 24/40 (60.00%), Postives = 30/40 (75.00%), Query Frame = 0 
Query:    1 MHSNWQQWVKRDIQIILDEPNIATLRDGPYVSIHVRRGDK 40
            +HS  Q W K DIQ ILDEP+IA +R+G YV +H+RR DK
Sbjct:  142 LHSYLQPWFKADIQRILDEPDIAEMRNGKYVGMHIRRTDK 181
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig173028.4485.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LU01_ECTSI6.010e-860.00GT23 domain-containing protein n=1 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027350Glycosyltransferase family 23 (GT23) domainPROSITEPS51659GT23coord: 1..41
score: 14.972

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig173028contigH-elongata_contig173028:125..247 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig173028.4485.1mRNA_H-elongata_contig173028.4485.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig173028 125..259 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig173028.4485.1 ID=prot_H-elongata_contig173028.4485.1|Name=mRNA_H-elongata_contig173028.4485.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=41bp
MHSNWQQWVKRDIQIILDEPNIATLRDGPYVSIHVRRGDKI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027350GT23_dom