prot_H-elongata_contig105402.448.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig105402.448.1
Unique Nameprot_H-elongata_contig105402.448.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length87
Homology
BLAST of mRNA_H-elongata_contig105402.448.1 vs. uniprot
Match: A0A1Y1IK20_KLENI (DUF659 domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IK20_KLENI)

HSP 1 Score: 66.2 bits (160), Expect = 9.140e-11
Identity = 31/76 (40.79%), Postives = 47/76 (61.84%), Query Frame = 0
Query:    1 MTGMKCAAHAVDLLLKDLGNLGFFADTLKRINKVVKFVKNHHGTSAIYESHTNLRLITPCATRFATNVIVAMHMLK 76
            +T   C AH +DL L+D+G   + + TLK    +VKF+ NHH T A++  H++L L+ P  TRFAT+ I    +L+
Sbjct:  287 ITCSGCVAHGMDLALEDVGKEEWVSPTLKAARDLVKFITNHHKTIALFRQHSDLELLKPGDTRFATSFITLERLLE 362          
BLAST of mRNA_H-elongata_contig105402.448.1 vs. uniprot
Match: A0A388LT59_CHABU (DUF659 domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LT59_CHABU)

HSP 1 Score: 63.5 bits (153), Expect = 8.290e-10
Identity = 28/72 (38.89%), Postives = 45/72 (62.50%), Query Frame = 0
Query:    4 MKCAAHAVDLLLKDLGNLGFFADTLKRINKVVKFVKNHHGTSAIYESHTNLRLITPCATRFATNVIVAMHML 75
            + C AH +DL+L+D+G++G+ A  + +   V KF   H+ T    E+ T L+L+ P  TRF+TNVI+   +L
Sbjct:   58 IPCVAHVMDLILEDIGSIGWVASPIAQARLVTKFFNRHNHTREALETKTKLKLLLPTKTRFSTNVIMMRRLL 129          
BLAST of mRNA_H-elongata_contig105402.448.1 vs. uniprot
Match: A0A388M3U7_CHABU (Integrase catalytic domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388M3U7_CHABU)

HSP 1 Score: 63.5 bits (153), Expect = 8.440e-10
Identity = 28/72 (38.89%), Postives = 43/72 (59.72%), Query Frame = 0
Query:    4 MKCAAHAVDLLLKDLGNLGFFADTLKRINKVVKFVKNHHGTSAIYESHTNLRLITPCATRFATNVIVAMHML 75
            ++C AH +DL+L+D+G++G+ A  + +   V KF K H       E  T L+L+ P  TRF TNVI+   +L
Sbjct:  555 IRCVAHVMDLILEDIGSIGWVASRIAQARLVTKFFKRHSHAREALEKKTKLKLLLPAETRFGTNVIMIRRLL 626          
BLAST of mRNA_H-elongata_contig105402.448.1 vs. uniprot
Match: A0A388LA56_CHABU (DUF659 domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LA56_CHABU)

HSP 1 Score: 62.8 bits (151), Expect = 1.530e-9
Identity = 27/73 (36.99%), Postives = 44/73 (60.27%), Query Frame = 0
Query:    4 MKCAAHAVDLLLKDLGNLGFFADTLKRINKVVKFVKNHHGTSAIYESHTNLRLITPCATRFATNVIVAMHMLK 76
            + C AH +DL+L+D+G++G+ A  + +   + KF K H       E+ T L+L+ P  TRF TNVI+   +L+
Sbjct:  128 IPCVAHVMDLVLEDIGSIGWVASRIAQARLITKFFKRHSHACEALEAKTKLKLLLPAETRFGTNVIMIRRLLE 200          
BLAST of mRNA_H-elongata_contig105402.448.1 vs. uniprot
Match: A0A804HMU3_MUSAM (DUF659 domain-containing protein n=1 Tax=Musa acuminata subsp. malaccensis TaxID=214687 RepID=A0A804HMU3_MUSAM)

HSP 1 Score: 62.4 bits (150), Expect = 2.050e-9
Identity = 32/82 (39.02%), Postives = 45/82 (54.88%), Query Frame = 0
Query:    6 CAAHAVDLLLKDLGNLGFFADTLKRINKVVKFVKNHHGTSAIYESHTNLRLITPCATRFATNVIVAM------HMLKASVSS 81
            CAAH +D++LKD+G L      + R   + KF+ NHH   A+ +++ N  ++ P  TRFATN I         H LKA  SS
Sbjct:  221 CAAHCIDIMLKDIGELDAVKKCVARAQSITKFIYNHHWVHALMQNYVNGEILRPGITRFATNFIALKSLQQKRHGLKAMGSS 302          
BLAST of mRNA_H-elongata_contig105402.448.1 vs. uniprot
Match: A0A388LG72_CHABU (DUF659 domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LG72_CHABU)

HSP 1 Score: 61.6 bits (148), Expect = 4.030e-9
Identity = 27/72 (37.50%), Postives = 42/72 (58.33%), Query Frame = 0
Query:    4 MKCAAHAVDLLLKDLGNLGFFADTLKRINKVVKFVKNHHGTSAIYESHTNLRLITPCATRFATNVIVAMHML 75
            + C AH +DL+L+D+G++G+ A  + +   V KF K H       E  T ++L+ P  TRF TNVI+   +L
Sbjct:  342 IPCVAHVMDLILEDIGSIGWVASRIAQARLVTKFFKRHSHAREALEKKTKMKLLLPAETRFGTNVIMIRRLL 413          
BLAST of mRNA_H-elongata_contig105402.448.1 vs. uniprot
Match: A0A6U2CN76_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A6U2CN76_9CHLO)

HSP 1 Score: 60.5 bits (145), Expect = 9.880e-9
Identity = 29/81 (35.80%), Postives = 49/81 (60.49%), Query Frame = 0
Query:    4 MKCAAHAVDLLLKDLGNLGFFADTLKRINKVVKFVKNHHGTSAIYE--------SHTNLRLITPCATRFATNVIVAMHMLK 76
            ++C+ H V+L+LKD+G LG+ A  LK+  + VKF++NHH   A+           H +  L++P  TRF T+V++   +L+
Sbjct:   69 VRCSTHGVNLMLKDVGKLGWAAKWLKKARQCVKFLRNHHKPQALVRMFSSRMSNEHKDKELLSPGNTRFGTSVLMLGRLLE 149          
BLAST of mRNA_H-elongata_contig105402.448.1 vs. uniprot
Match: A0A388K883_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K883_CHABU)

HSP 1 Score: 59.3 bits (142), Expect = 2.620e-8
Identity = 27/72 (37.50%), Postives = 41/72 (56.94%), Query Frame = 0
Query:    4 MKCAAHAVDLLLKDLGNLGFFADTLKRINKVVKFVKNHHGTSAIYESHTNLRLITPCATRFATNVIVAMHML 75
            + C AH +DL+L+D+G++G+ A  + +   V KF K         E  T L+L+ P  TRF TNVI+   +L
Sbjct:  297 IPCVAHVMDLILEDIGSIGWVASRIAQARLVTKFFKRQSHAREALEKKTKLKLLLPAETRFGTNVIMIRRLL 368          
BLAST of mRNA_H-elongata_contig105402.448.1 vs. uniprot
Match: A0A426WWC4_ENSVE (Uncharacterized protein n=1 Tax=Ensete ventricosum TaxID=4639 RepID=A0A426WWC4_ENSVE)

HSP 1 Score: 58.5 bits (140), Expect = 4.680e-8
Identity = 25/63 (39.68%), Postives = 37/63 (58.73%), Query Frame = 0
Query:    7 AAHAVDLLLKDLGNLGFFADTLKRINKVVKFVKNHHGTSAIYESHTNLRLITPCATRFATNVI 69
            AAH +DL+LKD+G L      + R   + KF+ NHH   ++ + + N  ++ P  TRFATN I
Sbjct:   89 AAHCIDLMLKDIGELDMVKKCVARAQSITKFIYNHHWVHSLMQKYVNDEILRPGVTRFATNFI 151          
BLAST of mRNA_H-elongata_contig105402.448.1 vs. uniprot
Match: A0A388JSR0_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JSR0_CHABU)

HSP 1 Score: 58.5 bits (140), Expect = 4.840e-8
Identity = 27/64 (42.19%), Postives = 39/64 (60.94%), Query Frame = 0
Query:    4 MKCAAHAVDLLLKDLGNLGFFADTLKRINKVVKFVKNHHGTSAIYES-HTNLRLITPCATRFAT 66
            + C AH   LLLKDL NL +  DT+K+ N +VKF++NHH T  +  +   +L L+ P   RF +
Sbjct:  400 VPCGAHCCSLLLKDLSNLPWVKDTVKKANTIVKFIRNHHSTHGLMMTIDDSLSLLRPTEVRFGS 463          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig105402.448.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Y1IK20_KLENI9.140e-1140.79DUF659 domain-containing protein n=1 Tax=Klebsormi... [more]
A0A388LT59_CHABU8.290e-1038.89DUF659 domain-containing protein n=1 Tax=Chara bra... [more]
A0A388M3U7_CHABU8.440e-1038.89Integrase catalytic domain-containing protein n=1 ... [more]
A0A388LA56_CHABU1.530e-936.99DUF659 domain-containing protein n=1 Tax=Chara bra... [more]
A0A804HMU3_MUSAM2.050e-939.02DUF659 domain-containing protein n=1 Tax=Musa acum... [more]
A0A388LG72_CHABU4.030e-937.50DUF659 domain-containing protein n=1 Tax=Chara bra... [more]
A0A6U2CN76_9CHLO9.880e-935.80Hypothetical protein n=1 Tax=Chlamydomonas euryale... [more]
A0A388K883_CHABU2.620e-837.50Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A426WWC4_ENSVE4.680e-839.68Uncharacterized protein n=1 Tax=Ensete ventricosum... [more]
A0A388JSR0_CHABU4.840e-842.19Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 6..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig105402contigH-elongata_contig105402:1569..1829 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig105402.448.1mRNA_H-elongata_contig105402.448.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig105402 1569..1832 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig105402.448.1 ID=prot_H-elongata_contig105402.448.1|Name=mRNA_H-elongata_contig105402.448.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=87bp
MTGMKCAAHAVDLLLKDLGNLGFFADTLKRINKVVKFVKNHHGTSAIYES
HTNLRLITPCATRFATNVIVAMHMLKASVSSVCFII*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf