mRNA_H-elongata_contig17302.4483.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig17302.4483.1
Unique NamemRNA_H-elongata_contig17302.4483.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig17302.4483.1 vs. uniprot
Match: D7FM15_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM15_ECTSI)

HSP 1 Score: 579 bits (1492), Expect = 1.820e-185
Identity = 357/642 (55.61%), Postives = 428/642 (66.67%), Query Frame = 1
Query:    1 AIEAAFRAGILRVLAATSTLGAGVNLPAGRVILRNLNAAGGGLSATSYRQMAGRAGRKGAGRARGEAVLIASNKGQATRATAIMNAGLAAVKSALGPSVDGGAGMAKMILEGVCGGLVRRKPDL--------VEYMACSLLFHQTPEGDARENLLDHAFAALQVLIDEACVQLMPQKRSIAMKPAPXXXXXXXXXX-----------------------------------------------------ARPAAGGKKLGSKLP-LISPYTRSGLRREPQSRGVAVSVKR--VSKVPEGGFVGVADG------DDGRLVPTKLGLAIFRSSMGPAEGLMVYRDLSEAKHGINLRNTLRLAYLLTPLCPPSGIKPNWERLYALYSRAKSASSAVENTDGRSASLVDDFHKIGITEGHLHLWASRGPSAAAKQSPLLSPDLVRRVASTRRGGSSVVIGEAPRR--RGDSATA----SAAQKAVRLVAAMALKDVSDGYNLGQVAKSYGMNKGDLQSLRQSTATFSSMVASFLKELGWTMFLMIVKGYVPRLSLGVSNNLLPLMQQVPGISRTEAGALYQGGIFNAKSLLAASEERVATALRMNVPFRTR-RGESLHSLFAGESIRFERRAQMLKKAAREMDARR 1695
            AIE AFR+G L VLAATSTLGAGVNLPAGRVILRN+NA GGGLSATSYRQMAGRAGRKGAGRARGEA+LIA+NKGQA RAT +MNAGLAAV+SAL P+ DGG G  +M LE VCG L+R + DL           + C+L+FHQ P+  AR+ L D+A+AA+Q+LIDE CV+L+ +      KP                                                                 ++P   G+KLG + P ++   T +  R    +  ++   +     K P  G +G A G      DD  LVPTKLGLAIFRSSM P +GLM+YRDLSEAK+GINLR+TL LAYLLTPL PP+G+KPNWERL A+Y+ A++A  A E   G +A LV+DFHKIGITE  LHLWASRGP    +++PLLSP  V++ AS RRGG         RR  RG         + A++AVRLVAAMALKDVSDGY+LGQVAKSYGMNKG+LQ+LRQSTATFS MVASFLKELGWT+FLM+VKG++P+LSLGVSN LLPLMQ VPG+SRTEA AL+Q GI NAKSLL+AS +RVATALR+NVPFRT  +G       AG   RFERRAQML  +AR +D +R
Sbjct:  389 AIEKAFRSGTLDVLAATSTLGAGVNLPAGRVILRNINAVGGGLSATSYRQMAGRAGRKGAGRARGEALLIAANKGQAARATGLMNAGLAAVRSALTPTADGGTGFTRMFLEAVCGKLIRTRADLRTGCPAVSSPNITCTLIFHQQPDEAARDRLHDYAWAAIQLLIDEGCVELIQRPTPAVAKPIATATKATASASLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKRVADTATHVPATYVPATKRSKPIVVGQKLGVQTPPVVYNDTAAAARARRATAAMSCEAQHGDFRKEPRSGGLGSASGVEEAGSDDRLLVPTKLGLAIFRSSMPPGDGLMIYRDLSEAKNGINLRHTLYLAYLLTPLSPPAGLKPNWERLRAMYASAQAA--AAETPPGPNAHLVEDFHKIGITESQLHLWASRGPGGGTREAPLLSPTAVQQAASARRGGRGEDGKTGTRRDARGSEEKKPTGLNPAKRAVRLVAAMALKDVSDGYHLGQVAKSYGMNKGELQNLRQSTATFSGMVASFLKELGWTIFLMLVKGHIPKLSLGVSNQLLPLMQ-VPGMSRTEASALFQEGIVNAKSLLSASSDRVATALRINVPFRTATKGGRGKDRGAGGCFRFERRAQMLADSARAVDTKR 1027          
BLAST of mRNA_H-elongata_contig17302.4483.1 vs. uniprot
Match: A0A6H5L306_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L306_9PHAE)

HSP 1 Score: 349 bits (895), Expect = 4.000e-102
Identity = 270/643 (41.99%), Postives = 334/643 (51.94%), Query Frame = 1
Query:    1 AIEAAFRAGILRVLAATSTLGAGVNLPAGRVILRNLNAAGGGLSATSYRQMAGRAGRKGAGRARGEAVLIASNKGQATRATAIMNAGLAAVKSALGPSVD-------------GGAGMAKMILEGVCGG------LVRRKPDLVEYMACSLLFHQTPEGDARENLLDHAFAALQVLIDEACVQLMPQKRSIAMKP------APXXXXXXXXXX----------------------------------------ARPAAGGKKLGSKLPLISPYTRSGL---RREPQSRGVAVSVKRVSKVPEGGFVGVADG------DDGRLVPTKLGLAIFRSSMGPAEGLMVYRDLSEAKHGINLRNTLRLAYLLTPLCPPSGIKPNWERLYALYSRAKSASSAVENTDGRSASLVDDFHKIGITEGHLHLWASRGPSAAAKQSPLLSPDLVRRVASTRRGGSSVVIGEAPRRRGDSATASAAQKAVRLVAAMALKDVSDGYNLGQ--VAKSYGMNKGDLQSLRQSTATFSSMVASFLKELGWTMFLMIVKGYVPRLSLGVSNNLLPLMQQVPGISRTEAGALYQGGIFNAKSLLAASEERVATALRMNVPFR--TRRGESLHSLFAGESIRFERRAQMLKKAAREMDARR 1695
            AIE AFR+G L VLAATSTLGAGVNLPAGRVILRN+NA GGGLSAT +               +G +V +   K   TR           V S    + D               + ++       C        L+ R       + C+L+FHQ P+  AR+ L D+A+AA+Q+LIDE CV+L+        KP      AP       XXX                                        ++P   G+K+G + P ++    +     RR   +           K P  G +G   G      DD  LVPTKLGLAIFRSSM P +GLM+YRDLSEAK+GINLR+TL LAYLLTPL PP+G+KPNWERL A+Y+ A++A  A E   G +A LV+D HKIGITE  LHLWASRGP    +++PLLSP  V++ AS RRGG    +G+      D  T +              +DV  G    Q  VAKSYGMNKG+LQ+LRQSTATFS MVASFLK                                VPG+SRTEA AL+Q GI NAKSLL+AS +RVATALR+NVPFR  T+ G       AGE  RFERRAQML  +AR +D +R
Sbjct:  335 AIEKAFRSGALDVLAATSTLGAGVNLPAGRVILRNINAVGGGLSATRFSSDVV---------VKGGSVAVLDQKKYTTRTARSAEPRFFNVFSCPVLATDEPPHVPTDPLHPPSPSALSSPRPTSACRYAYLKLLLMYRSCLPAMLLKCTLIFHQQPDEAARDRLHDYAWAAIQLLIDEGCVELIQPPTPAVPKPIATAAKAPASASLVAXXXXXXXXXXXXXXXXXXXXXXNKRVADTATHVPATYVPVTKRSKPTVVGQKVGVQTPPVAHNDTAAAARGRRATAAMSCEAQDGDFRKEPRSGGLGSVSGVEEAGSDDRLLVPTKLGLAIFRSSMPPGDGLMIYRDLSEAKNGINLRHTLYLAYLLTPLSPPAGLKPNWERLRAMYASAQAA--AAETPPGPNAHLVEDLHKIGITESQLHLWASRGPGGGTREAPLLSPTAVQQAASARRGG----LGD------DGKTGTR-------------RDVRGGTIDSQSPVAKSYGMNKGELQNLRQSTATFSGMVASFLK--------------------------------VPGMSRTEASALFQEGIVNAKSLLSASSDRVATALRINVPFRSATKEGRG-KDRGAGECFRFERRAQMLADSARAVDTKR 910          
BLAST of mRNA_H-elongata_contig17302.4483.1 vs. uniprot
Match: W7U5L3_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U5L3_9STRA)

HSP 1 Score: 189 bits (480), Expect = 1.910e-47
Identity = 174/576 (30.21%), Postives = 274/576 (47.57%), Query Frame = 1
Query:    1 AIEAAFRAGILRVLAATSTLGAGVNLPAGRVILRNLNAAGGGL-SATSYRQMAGRAGRKGAGRARGEAVLIASNKGQATRATAIMNAGLAAVKSALGPSVDGGAGMAKMILEGVCGGLVRRKPDLVEYMACSLLFHQTPEGDAREN-LLDHAFAALQVLIDEACVQLMPQKRSIAMKPAPXXXXXXXXXXARPAAGGKKLGSKLPLISPYTRSGLRREPQSRGVAVSVKRVSKVPE-GGFVGVADGDDGRLVPTKLGLAIFRSSMGPAEGLMVYRDLSEAKHGINLRNTLRLAYLLTPLCPPSGIKPNWERLYALYSRAKSASSAVENTDGRSASLVDDFHKIGITEGHLHLWASRGPSAAAKQSPLL-----------SPDLVRRVASTRRGGSSVVIGEAPRRRGDSATASAAQKAVRLVAAMALKDVSDGYN-LGQVAKSYGMNKGDLQSLRQSTATFSSMVASFLKELGWTMFLMIVKGYVPRLSLGVSNNLLPLMQQVPGISRTEAGALYQGGIFNAKSLLAASEERVATALRMNVPFRTRR---GESLHSLFAGESIRFERRAQMLKKAA 1674
            A+E AFR G+L V+ ATSTLG G+NLPA RVI R L   G  +   +SYRQMAGRAGR G  +  GE++L+A +      AT +M   L  + S L P  DGG  + + ILE +  G +++  DL  ++ C+L   Q      R N  L +A  AL+ L++   V+ +P                           G  + +++      T       P+ +   V       VP+ G  V         L P+KLG A+F+SS  P EGL+V++DL  A+  + L   L L YL+TP+  P  + P++ +L+ +Y RA+        TD   A +   F  IG +E  L  W+ + P++     PLL           +  L + +  + R  + VV GE               +A RL  A+AL D++     L   A +YG+++G LQ+L+QS A++  M+ SFL +LGWT+    ++     +       L+PLMQ +P +  + A ALY   +    ++ +   E +A  +R   PF   +   G ++  L + E   ++  A+ L++AA
Sbjct:  485 ALEEAFRRGVLSVIVATSTLGTGINLPAARVIFRTLRPGGNRVFDISSYRQMAGRAGRAGQQKY-GESILLARSPQDVKEATRLMTEPLHDLHSCLDPEQDGGRALVRAILEAIASGSLQKNDDLDIFLHCTLALRQRIRHSPRLNSFLYYARDALRYLVEHRIVKQLP---------------------------GPSVNAEV-----STSQRAEHTPEQKEQTVMSTAAPPVPDIGSTVSTL------LSPSKLGHALFKSSFAPDEGLLVFQDLKHAQQRLVLDGNLHLIYLVTPVFHP--LLPDYNQLWKIYDRAR-------RTDPVKALI---FELIGFSEALLDRWSHQQPASGVLIGPLLHLGSSEAGNHTARGLAQPIGRSIRMATGVVEGEQLM----------IMRARRLWGALALHDLAVAERPLDATAATYGVDRGSLQALQQSAASYVGMIQSFLTQLGWTLLSRALEEAGTAVGGEQVKELMPLMQ-IPRLELSLARALYDTDVRTVAAVCSEPVEHLADIIRKIRPFSAEKRGDGVAVPGLESDEMACYDEAARRLREAA 998          
BLAST of mRNA_H-elongata_contig17302.4483.1 vs. uniprot
Match: UPI001885AD34 (DNA polymerase theta isoform X1 n=2 Tax=Syngnathus acus TaxID=161584 RepID=UPI001885AD34)

HSP 1 Score: 150 bits (379), Expect = 1.860e-34
Identity = 160/535 (29.91%), Postives = 225/535 (42.06%), Query Frame = 1
Query:    4 IEAAFRAGILRVLAATSTLGAGVNLPAGRVILRNLNAAGGGLSATSYRQMAGRAGRKGAGRARGEAVLIASNKGQATRATAIMNAGLAAVKSAL----GPSVDGGAGMAKMILEGVCGGLVRRKPDLVEYMACSLLFHQTPEGDARENLLDHAFAALQVLIDEACVQLMPQKRSIAMKPAPXXXXXXXXXXARPAAGGKKLGSKLPLISPYTRSGLRREPQSRGVAVSVKRVSKVPEGGFVGVADGDDGRLVPTKLGLAIFRSSMGPAEGLMVYRDLSEAKHGINLRNTLRLAYLLTPLCPPSGIKPNWERLYALYSRAKSASSAVENTDGRSASLVDDFHKIGITEGHLHLWASRGPSAAAKQSPLLSPDLVRRVASTRRGGSSVVIGEAPRRRGDSATASAAQKAV--RLVAAMALKDVSDGYNLGQVAKSYGMNKGDLQSLRQSTATFSSMVASFLKELGWTMFLMIVKGYVPRLSLGVSNNLLPLMQQVPGISRTEAGALYQGGIFNAKSLLAASEERVATALRMNVPFRT 1590
            +E AFR G +RVLAATSTL +GVNLPA RVI+R     G  L   +Y+QMAGRAGRKG     GE+VL+     +  +  +++   L  +KS L    G  V+    M + ILE + GG+ R   D+  Y +CSLL         + N  +    A      EACV+ + +   I+++                                                                  +G++ +  PT+LG A   SS+ P E L ++ DL  A  G  L N L + YL+TPL        +W + + L+ +  S+   V       A LV      GI EG L                       R V     GG  V   E  RR          Q A+  R    + L+D+ +   LG VA  Y  N+G LQSL+QS AT++ MV  F + LGW    +++  Y  RLS GV   L+ L++ V  ++ T A A Y  G+     L  AS   V  ALR  VPF++
Sbjct:  587 LEGAFRQGTVRVLAATSTLSSGVNLPARRVIIRTPTFNGHLLDPLTYKQMAGRAGRKGVDTT-GESVLVCKEV-ERQKGISLLRGHLQPIKSCLVRREGEGVN--TSMLRAILEIIVGGVARTPQDVRLYASCSLL-----AASMKCNSKEECEEASNKGAIEACVEWLMENEFISVQ-----------------------------------------------------------------KEGEEEQYCPTQLGAATMSSSLSPTEALGIFADLQRAMKGFVLENDLHVLYLITPLYA-EWTTIDWYQFFCLWEQLSSSMKRV-------AELV------GIQEGFL----------------------ARSV-----GGKLVAKTEKQRR----------QMAIHKRFFTTLVLQDLVNEVPLGAVASKYSCNRGQLQSLQQSAATYAGMVTMFCRRLGWGNMELLLSQYQTRLSFGVQRELVDLVR-VSLLTATRARAFYVQGLTTVAELARASVADVEKALRNAVPFKS 995          
BLAST of mRNA_H-elongata_contig17302.4483.1 vs. uniprot
Match: UPI00094E0157 (DNA polymerase theta isoform X1 n=4 Tax=Hippocampus comes TaxID=109280 RepID=UPI00094E0157)

HSP 1 Score: 149 bits (375), Expect = 6.000e-34
Identity = 150/531 (28.25%), Postives = 221/531 (41.62%), Query Frame = 1
Query:    4 IEAAFRAGILRVLAATSTLGAGVNLPAGRVILRNLNAAGGGLSATSYRQMAGRAGRKGAGRARGEAVLIASNKGQATRATAIMNAGLAAVKSALGPSVDGGA--GMAKMILEGVCGGLVRRKPDLVEYMACSLLFHQTPEGDARENLLDHAFAALQVLIDEACVQLMPQKRSIAMKPAPXXXXXXXXXXARPAAGGKKLGSKLPLISPYTRSGLRREPQSRGVAVSVKRVSKVPEGGFVGVADGDDGRLVPTKLGLAIFRSSMGPAEGLMVYRDLSEAKHGINLRNTLRLAYLLTPLCPPSGIKPNWERLYALYSRAKSASSAVENTDGRSASLVDDFHKIGITEGHLHLWASRGPSAAAKQSPLLSPDLVRRVASTRRGGSSVVIGEAPRRRGDSATASAAQKAVRLVAAMALKDVSDGYNLGQVAKSYGMNKGDLQSLRQSTATFSSMVASFLKELGWTMFLMIVKGYVPRLSLGVSNNLLPLMQQVPGISRTEAGALYQGGIFNAKSLLAASEERVATALRMNVPFRT 1590
            +E AFR G++RVLAATSTL +GVNLPA RVI+R     G  L   +Y+QMAGRAGRKG     GE+VL+   + +  +  +++   L  ++S L      G    M + ILE + GG+     D+  Y +CSLL         +++  D    A+     EACV+ + +   I+++                                                                  DG++ +  PT+LG A   SS+ P E L ++ DL  A  G  L N L + YL+TPL        +W + + L+ +              S S+      +G+ EG L        S  AK            VA T +    + I +                  R    + L D+     L  VA  Y  N+G LQSL+QS AT++ MV  F + LGW    +++  Y  RLS G+   L+ L++ V  ++ T A ALY  G+     L  AS   V  ALR  VPF++
Sbjct:  601 LEGAFRQGMVRVLAATSTLSSGVNLPARRVIIRTPTFNGHLLDPLTYKQMAGRAGRKGVDTT-GESVLVCK-EAERQKGVSLLTGDLQPIRSCLVRRQGDGVTTSMLRAILEIIVGGVASTPQDVRLYASCSLLAAGMKCNSKQDSQEDSNRGAI-----EACVEWLMENEFISVQ-----------------------------------------------------------------KDGEEEQYCPTQLGAATLSSSLSPTEALGIFADLQRAMKGFVLENDLHILYLITPLYA-EWTTIDWYQFFCLWEQL-------------STSMKRVAELVGVQEGFL------ARSVGAKL-----------VAKTEKQCRQIAIHK------------------RFFTTLVLHDLVKEVPLAAVASKYNCNRGQLQSLQQSAATYAGMVTMFCRRLGWGNMELLLSQYQTRLSFGIQRELVDLVR-VSLLTATRARALYAQGLCTVAELARASVADVQKALRNAVPFKS 1009          
BLAST of mRNA_H-elongata_contig17302.4483.1 vs. uniprot
Match: A0A3P8HA37_9TREM (Helicase C-terminal domain-containing protein n=2 Tax=Echinostoma caproni TaxID=27848 RepID=A0A3P8HA37_9TREM)

HSP 1 Score: 146 bits (369), Expect = 1.890e-33
Identity = 146/531 (27.50%), Postives = 242/531 (45.57%), Query Frame = 1
Query:    4 IEAAFRAGILRVLAATSTLGAGVNLPAGRVILRNLNAAGGGLSATSYRQMAGRAGRKGAGRARGEAVLIASNKGQATRATAIMNAGLAAVKSAL---GPSVDGGAGMAKMILEGVCGGLVRRKPDLVEYMACSLLFHQTPEGDARENLLDHAFAALQVLIDEACVQLMPQKRSIAMKPAPXXXXXXXXXXARPAAGGKKLGSKLPLISPYTRSGLRREPQSRGVAVSVKRVSKVPEGGFVGV-ADGDDGRLVPTKLGLAIFRSSMGPAEGLMVYRDLSEAKHGINLRNTLRLAYLLTPLCPPSGIKPNWERLYALYSRAKSASSAVENTDGRSASLVDDFHKIGITEGHLHLWASRGPSAAAKQSPLLSPDLVRRVASTRRGGSSVVIGEAPRRRGDSATASAAQKAVRLVAAMALKDVSDGYNLGQVAKSYGMNKGDLQSLRQSTATFSSMVASFLKELGWTMFLMIVKGYVPRLSLGVSNNLLPLMQQVPGISRTEAGALYQGGIFNAKSLLAASEERVATALRMNVPF 1584
            +E  FRAG++RVL ATSTL +GVNLPA RVI+R     G  L   +Y+QMAGRAGRKG   + G+++L+   +    R   ++ +G+++V S L   G S +  + + + +LE +  G +    D   Y++ +L+        +  +   H      + + +   + +P+ ++++ +                +     L + L  +  +    + R   +     + +  +K+P      V A  D  RL PT LG A+  SS+GP  GL+V+ ++++A+  I L   L L YLLTP+    G   +W R    Y        ++  +D R A L      IG+ E  +   AS G S   ++         +R+A  R                            R   A+AL  +     LG VA+ +G+N+G LQSL+Q  AT++ MV  F   LGW     ++  +  RL  GV+  L+ L++  P ++   A ALY GG  +  +L  A    +A  L+  +PF
Sbjct:    9 VENGFRAGLIRVLVATSTLSSGVNLPARRVIIRTPLFHGQILDYLTYKQMAGRAGRKGVDTS-GQSILLCKPR-DLPRVRQLITSGMSSVSSCLMSHGGSPE--SSLRRALLEVIANGFIETVADARLYLSSTLMAASQRAQSSTPSTRRHNNRRKSLRLSQT--KALPKSQTLSQE----------NISQEESDTDPLLIACLAQLQDHELIYVNRTRCTDADCQTCQLNAKLPSDQSDPVKAYPDCARLQPTALGRAVLSSSLGPTHGLVVFEEMNKARRAIALDTELHLVYLLTPVYLDVGAGLDWFRYLERY-------QSLPPSDRRVADL------IGVEERFITRMAS-GASGGMQKHGETGSSHAQRLALHR----------------------------RFYTALALYGLVREDGLGTVAEQFGVNRGLLQSLQQQAATYAGMVTIFCNRLGWVHMERLLSSFQSRLFHGVAEELVDLLRLQPAVNAQRARALYSGGYSSVSALSTARACDIARLLQRAIPF 481          
BLAST of mRNA_H-elongata_contig17302.4483.1 vs. uniprot
Match: A0A8J4WSC1_9TREM (DNA-directed DNA polymerase n=1 Tax=Paragonimus heterotremus TaxID=100268 RepID=A0A8J4WSC1_9TREM)

HSP 1 Score: 143 bits (361), Expect = 3.360e-32
Identity = 159/557 (28.55%), Postives = 238/557 (42.73%), Query Frame = 1
Query:    4 IEAAFRAGILRVLAATSTLGAGVNLPAGRVILRNLNAAGGGLSATSYRQMAGRAGRKGAGRARGEAVLIASNKGQATRATAIMNAGLAAVKSALGPSVDGGA--GMAKMILEGVCGGLVRRKPDLVEYMACSLL----------FHQTPEG-DARENLLDHAFAALQVLIDEACVQLMPQKRSIAMKPAPXXXXXXXXXXARPAAGGKKLGSKLPLISPYTRSGLRREPQSR------GVAVSVKRVSKVPEGGFVGVADGDDGRLVPTKLGLAIFRSSMGPAEGLMVYRDLSEAKHGINLRNTLRLAYLLTPLCPPSGIKPNWERLYALYSRAKSASSAVENTDGRSASLVDDFHKIGITEGHLHLWASRGPSAAAKQSPLLSPDLVRRVASTRRGGSSVVIGEAPRRRGDSATASAAQKAVRLVAAMALKDVSDGYNLGQVAKSYGMNKGDLQSLRQSTATFSSMVASFLKELGWTMFLMIVKGYVPRLSLGVSNNLLPLMQQVPGISRTEAGALYQGGIFNAKSLLAASEERVATALRMNVPFRTRRGESLHSL 1617
            +E+ FRAG++R+L ATSTL +GVNLPA RVI+R     G  L    Y+QMAGRAGRKG   + G+++L+   +    R   +++AG+  V+S L  S  G +   + + +LE +  G +    D   Y++ +L+          F  + +    R   L  +   LQ      C +L          P+                  + L + L  +S Y    + R   +        V+V       V      G A     RL PT  G A+  SS+GP  GL+V+ +L +A+  I L   L   YLLTP+    G   +W R    Y        A+   D R A L      IG+ E  +    S   ++ ++     S  L  RVA  R                            R   A+AL  +     L  VA+++G+N+G LQSL+Q  AT++ MV  F   LGW     ++  Y  RL  GVS  L+ L++ +P ++   A ALY GG     SL +A    +A  L+  V F+   G +L  L
Sbjct:  344 VESGFRAGVIRILVATSTLSSGVNLPARRVIIRTPLFHGRILDYLCYKQMAGRAGRKGLDTS-GQSILLCKPR-DLPRVRQLISAGMPPVRSCLIDSHGGASESSLKRALLEVIANGFIETVADARLYLSSTLMAVIMLSTNDQFAASSQNCSTRRRSLRLSQPGLQ-----PCRELCGSSTKQLESPSLTEQFISFI--------NRILNTCLSQLSDYELILIDRSTCAHTGCLDCNVSVDQDERDLVKSDILPGCA-----RLQPTAFGRAVLSSSLGPTHGLVVFEELDKARRAIALDTDLHFVYLLTPVYLDVGAALDWYRYLEQY-------QALSAADRRVADL------IGVEERFIIRCVSGASASGSRYGT--STCLADRVALHR----------------------------RFYMALALYRLVCEDGLSTVAQNFGINRGLLQSLQQQAATYAGMVTVFCNRLGWVHLERLLANYQSRLFYGVSEELVDLLRLLPLVNAQRARALYSGGYTTVSSLASAKPRDLARFLQRAVQFQKGEGCTLEQL 837          
BLAST of mRNA_H-elongata_contig17302.4483.1 vs. uniprot
Match: UPI0008709B60 (DNA polymerase theta n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI0008709B60)

HSP 1 Score: 143 bits (360), Expect = 4.400e-32
Identity = 143/534 (26.78%), Postives = 218/534 (40.82%), Query Frame = 1
Query:    4 IEAAFRAGILRVLAATSTLGAGVNLPAGRVILRNLNAAGGGLSATSYRQMAGRAGRKGAGRARGEAVLIASNKGQATRATAIMNAGLAAVKSALGPSVDGGAGMAKMILEGVCGGLVRRKPDLVEYMACSLLFHQTPEGDARENLLDHAFAALQVLIDEACVQLMPQKRSIAMKPAPXXXXXXXXXXARPAAGGKKLGSKLPLISPYTRSGLRREPQSRGVAVSVKRVSKVPEGGFVGVADGDDGRLVPTKLGLAIFRSSMGPAEGLMVYRDLSEAKHGINLRNTLRLAYLLTPLCPPSGIKPNWERLYALYSRAKSASSAVENTDGRSASLVDDFHKIGITEGHLHLWASRGPSAAAKQSPLLSPDLVRRVASTRRGGSSVVIGEAPRRRGDSATASAAQKAVRLVAAMALKDVSDGYNLGQVAKSYGMNKGDLQSLRQSTATFSSMVASFLKELGWTMFLMIVKGYVPRLSLGVSNNLLPLMQQVPGISRTEAGALYQGGIFNAKSLLAASEERVATALRMNVPFRTRRGES 1605
            IE AF+AGI+ VL ATSTL +GVNLPA RVI+R        L   +Y+QM GRAGRKG    RGE++L+     +A +AT +    L  V+S L       +G+ + I+E +  G V+   D+  Y+ C+          + + + DH   +     D  CV  + +   I++                                                                   + D+GR+ PTKLGLA+  SS+ P + L+V R+L +++    L N L + Y +TP         +W RL   Y                  +L +D  ++    G                 P      +R  AS R   S V + +                  R   A+AL ++     L +V++ +G+ KG LQ+L+QS ATF+ MV+ F K LGW    +++  +  RL  GV   L  L+Q VP  ++  A  L+  G  N   +  A    V +ALR    ++T  GES
Sbjct:  337 IENAFKAGIINVLTATSTLSSGVNLPARRVIIRTPIFGRQLLDVMTYKQMIGRAGRKGIDE-RGESILMCKENERA-QATRLATMKLHPVRSCLSSRGSVSSGLKRAIMEVIASGKVKSLKDIDTYIECTF---------SSKCIEDHDDGSTSSAKD--CVDYLVKNDFISV-----------------------------------------------------------------CTEDDEGRVTPTKLGLAVLASSLSPDQALLVLRELKKSRQSFVLENDLHIIYEVTPYFISEQAAIDWMRLMETYD-----------------ALTEDRKRVAEVIGF---------------EPAFVSKCIRAAASKREMSSKVTLHQ------------------RFYVALALNELVQEVPLSEVSEKFGLQKGLLQNLQQSAATFAGMVSIFCKRLGWHNLELLISQFQKRLHFGVQQELCELLQLVPMTAQV-ARILFNAGFTNLPQVARAELHEVESALRNARAYQTNNGES 741          
BLAST of mRNA_H-elongata_contig17302.4483.1 vs. uniprot
Match: A0A7M3QZH5_SPIER (DNA-directed DNA polymerase n=2 Tax=Diphyllobothriidae TaxID=28843 RepID=A0A7M3QZH5_SPIER)

HSP 1 Score: 143 bits (360), Expect = 4.590e-32
Identity = 162/536 (30.22%), Postives = 236/536 (44.03%), Query Frame = 1
Query:    4 IEAAFRAGILRVLAATSTLGAGVNLPAGRVILRNLNAAGGGLSATSYRQMAGRAGRKGAGRARGEAVLIASNKGQATRATAIMNAGLAAVKSAL-GPSVDGGAGMAKMILEGVCGGLVRRKPDLVEYMACSLLFH--QTPEGDARENLLDHAFAALQVL-IDEACVQLMPQKRSIAMKPAPXXXXXXXXXXARPAAGGKKLGSKL--PLISPYTRSGLRREPQSRGVAVSVKRVSKVPEGGFVGVADGDDGRLVPTKLGLAIFRSSMGPAEGLMVYRDLSEAKHGINLRNTLRLAYLLTPLCPPSGIKPNWERLYALYSRAKSASSAVENTDGRSASLVDDFHKIGITEGHLHLWASRGPS--AAAKQSPLLS-PDLVRRVASTRRGGSSVVIGEAPRRRGDSATASAAQKAVRLVAAMALKDVSDGYNLGQVAKSYGMNKGDLQSLRQSTATFSSMVASFLKELGWTMFLMIVKGYVPRLSLGVSNNLLPLMQQVPGISRTEAGALYQGGIFNAKSLLAASEERVATALRMNVPF 1584
            IE AFR G LR+L ATSTL +GVNLPA RVI+R L   G  L   +Y+QM+GRAGRKG     GE++L+   +    RA  +++ G+  V S L   S    + + + +LE +  G+V R  D+  Y+  +LL    +    D  E+L     +  Q+  +      + P +R  + +              R  A  +K  S L    +S    S L    +      S  R S    G  +  +D     L  T LG A+  S++GP +GL V+ +L  A+  I L   L L YL+TP+    G   +W R   +Y    +        D R A LV      G+ E  +    + G     A KQS + +   LV R                                 R   A+AL  +     L  V++ + +N+G LQSL Q  AT++ MV  F   LGWT    ++  +  RL  GV++ L+ LM+  P IS   A ALY  G  +A SL  A  + VA AL+ + PF
Sbjct:  426 IEVAFRKGHLRLLVATSTLSSGVNLPARRVIIRTLLFHGQTLDYLTYKQMSGRAGRKGID-TEGESILLCKPR-DLGRAKQLLSTGMPPVTSCLLSRSGTPQSSLRRALLEVIVNGIVERVSDVRAYIESTLLAACLKAAGCDYSESLEKSPSSGPQLATVLPVSAMVHPTRRRSSRR----VLRRSSQASVRDMAASEKDHSNLLFACLSSLVDSELITAEEVSCEHESCLRPSTPAVGDPIFFSDCT--HLRSTALGRAVLSSALGPIDGLTVFAELDRARRSIALDTDLHLVYLVTPIYLDVGESLDWFRYLEIYQNLSAP-------DRRVADLV------GVGERFIMRCVAGGSCRVGAKKQSAVQAFSALVHR---------------------------------RFYTALALYRLICEDGLACVSERFRVNRGVLQSLTQQAATYAGMVTIFCNRLGWTHLERLLAAFQARLLFGVASELIDLMRLSPLISAQRARALYSAGFTSAASLARARPKEVARALQQSNPF 907          
BLAST of mRNA_H-elongata_contig17302.4483.1 vs. uniprot
Match: K1QA60_CRAGI (DNA-directed DNA polymerase n=2 Tax=Crassostrea gigas TaxID=29159 RepID=K1QA60_CRAGI)

HSP 1 Score: 139 bits (351), Expect = 6.610e-31
Identity = 148/534 (27.72%), Postives = 227/534 (42.51%), Query Frame = 1
Query:    4 IEAAFRAGILRVLAATSTLGAGVNLPAGRVILRNLNAAGGGLSATSYRQMAGRAGRKGAGRARGEAVLIASNKGQATRATAIMNAGLAAVKSAL----GPSVDGGAGMAKMILEGVCGGLVRRKPDLVEYMACSLLFHQTPEGDARENLLDHAFAALQVLIDEACVQLMPQKRSIAMKPAPXXXXXXXXXXARPAAGGKKLGSKLPLISPYTRSGLRREPQSRGVAVSVKRVSKVPEGGFVGVADGDDGRLVPTKLGLAIFRSSMGPAEGLMVYRDLSEAKHGINLRNTLRLAYLLTPLCPPS-GIKPNWERLYALYSRAKSASSAVENTDGRSASLVDDFHKIGITEGHLHLWASRGPSAAAKQSPLLSPDLVRRVASTRRGGSSVVIGEAPRRRGDSATASAAQKAVRLVAAMALKDVSDGYNLGQVAKSYGMNKGDLQSLRQSTATFSSMVASFLKELGWTMFLMIVKGYVPRLSLGVSNNLLPLMQQVPGISRTEAGALYQGGIFNAKSLLAASEERVATALRMNVPFRT 1590
            +E AFR G ++VL ATSTL +GVNLPA RVI+R     G  +   +Y+QM GRAGRKG    +GE++LI    G+ ++A  ++ + L  V S L    G  +   + M + ILE V  G+     D+  Y +C++L             LD +    Q +I  AC+Q + +   ++                                       L+R   S GV                      + R VPT+LG A+  SS+ P EGL V+ +L +A+    L N L + YL+TP+     G   NW + Y L+ +       +     R A LV      G++E  L         A   + P  + + +R +A  +R  +S++                            L D+     LG+V   YG NKG LQSL+Q+ ATF+ MV  F   LGW    +I+  +  RL+ G+   L  L++ +  ++   A  LY GG     +L  AS   V    + + PF++
Sbjct:  545 LEGAFRQGAVKVLIATSTLSSGVNLPARRVIIRTPLFHGKTIDFLTYKQMIGRAGRKGVD-TQGESILICK-PGERSKAVTLVQSALPPVSSCLIKNQGEQLS--SSMKRAILEIVVSGVADSVTDVTAYASCTMLAAS----------LDTSSDQTQGMIS-ACIQFLQENEFVS---------------------------------------LQRVQSSDGVY---------------------EDRFVPTQLGAAVLASSLSPDEGLSVFAELQKARQCFVLENELHIVYLVTPIYSLDLGAGMNWYKFYCLWDK-------LSPDKKRVAQLV------GVSEAFL-------TRAIQGRIPTKTENQIRSLAIHKRFYTSLI----------------------------LSDLVQEVPLGEVCHRYGANKGQLQSLQQTAATFAGMVTVFCARLGWYNLELILGQFQHRLTFGIQRELCDLVR-LTLLNGQRARVLYDGGFHTVAALANASVSDVEKIFKKSSPFQS 954          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17302.4483.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FM15_ECTSI1.820e-18555.61DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5L306_9PHAE4.000e-10241.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7U5L3_9STRA1.910e-4730.21Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
UPI001885AD341.860e-3429.91DNA polymerase theta isoform X1 n=2 Tax=Syngnathus... [more]
UPI00094E01576.000e-3428.25DNA polymerase theta isoform X1 n=4 Tax=Hippocampu... [more]
A0A3P8HA37_9TREM1.890e-3327.50Helicase C-terminal domain-containing protein n=2 ... [more]
A0A8J4WSC1_9TREM3.360e-3228.55DNA-directed DNA polymerase n=1 Tax=Paragonimus he... [more]
UPI0008709B604.400e-3226.78DNA polymerase theta n=1 Tax=Galendromus occidenta... [more]
A0A7M3QZH5_SPIER4.590e-3230.22DNA-directed DNA polymerase n=2 Tax=Diphyllobothri... [more]
K1QA60_CRAGI6.610e-3127.72DNA-directed DNA polymerase n=2 Tax=Crassostrea gi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17302contigH-elongata_contig17302:3..6878 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score586.3
Seed ortholog evalue1.6e-164
Seed eggNOG ortholog2880.D7FM15
KEGG koko:K02349
GOsGO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006287,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360
EggNOG free text desc.plastid DNA replication
EggNOG OGsCOG0749@1,KOG0950@2759
EC2.7.7.7
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03400
Hectar predicted targeting categorysignal peptide
Exons11
Model size1695
Cds size1695
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930006.834719-CDS-H-elongata_contig17302:2..1421622930006.834719-CDS-H-elongata_contig17302:2..142Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17302 3..142 +
1691679243.278948-CDS-H-elongata_contig17302:2..1421691679243.278948-CDS-H-elongata_contig17302:2..142Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17302 3..142 +
1622930006.8556688-CDS-H-elongata_contig17302:709..8471622930006.8556688-CDS-H-elongata_contig17302:709..847Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17302 710..847 +
1691679243.2880802-CDS-H-elongata_contig17302:709..8471691679243.2880802-CDS-H-elongata_contig17302:709..847Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17302 710..847 +
1622930006.8708248-CDS-H-elongata_contig17302:1841..19361622930006.8708248-CDS-H-elongata_contig17302:1841..1936Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17302 1842..1936 +
1691679243.2959883-CDS-H-elongata_contig17302:1841..19361691679243.2959883-CDS-H-elongata_contig17302:1841..1936Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17302 1842..1936 +
1622930006.88607-CDS-H-elongata_contig17302:2247..27001622930006.88607-CDS-H-elongata_contig17302:2247..2700Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17302 2248..2700 +
1691679243.3046596-CDS-H-elongata_contig17302:2247..27001691679243.3046596-CDS-H-elongata_contig17302:2247..2700Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17302 2248..2700 +
1622930006.9094498-CDS-H-elongata_contig17302:3422..35291622930006.9094498-CDS-H-elongata_contig17302:3422..3529Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17302 3423..3529 +
1691679243.3151567-CDS-H-elongata_contig17302:3422..35291691679243.3151567-CDS-H-elongata_contig17302:3422..3529Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17302 3423..3529 +
1622930006.924622-CDS-H-elongata_contig17302:3784..40231622930006.924622-CDS-H-elongata_contig17302:3784..4023Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17302 3785..4023 +
1691679243.3258126-CDS-H-elongata_contig17302:3784..40231691679243.3258126-CDS-H-elongata_contig17302:3784..4023Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17302 3785..4023 +
1622930006.9434419-CDS-H-elongata_contig17302:4615..47151622930006.9434419-CDS-H-elongata_contig17302:4615..4715Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17302 4616..4715 +
1691679243.3359885-CDS-H-elongata_contig17302:4615..47151691679243.3359885-CDS-H-elongata_contig17302:4615..4715Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17302 4616..4715 +
1622930006.9707935-CDS-H-elongata_contig17302:5033..51261622930006.9707935-CDS-H-elongata_contig17302:5033..5126Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17302 5034..5126 +
1691679243.3461754-CDS-H-elongata_contig17302:5033..51261691679243.3461754-CDS-H-elongata_contig17302:5033..5126Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17302 5034..5126 +
1622930006.9904637-CDS-H-elongata_contig17302:5300..53931622930006.9904637-CDS-H-elongata_contig17302:5300..5393Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17302 5301..5393 +
1691679243.3567483-CDS-H-elongata_contig17302:5300..53931691679243.3567483-CDS-H-elongata_contig17302:5300..5393Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17302 5301..5393 +
1622930007.0128965-CDS-H-elongata_contig17302:5819..59761622930007.0128965-CDS-H-elongata_contig17302:5819..5976Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17302 5820..5976 +
1691679243.3667932-CDS-H-elongata_contig17302:5819..59761691679243.3667932-CDS-H-elongata_contig17302:5819..5976Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17302 5820..5976 +
1622930007.0381079-CDS-H-elongata_contig17302:6798..68781622930007.0381079-CDS-H-elongata_contig17302:6798..6878Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17302 6799..6878 +
1691679243.376965-CDS-H-elongata_contig17302:6798..68781691679243.376965-CDS-H-elongata_contig17302:6798..6878Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17302 6799..6878 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17302.4483.1prot_H-elongata_contig17302.4483.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig17302 3..6878 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig17302.4483.1

>prot_H-elongata_contig17302.4483.1 ID=prot_H-elongata_contig17302.4483.1|Name=mRNA_H-elongata_contig17302.4483.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=565bp
AIEAAFRAGILRVLAATSTLGAGVNLPAGRVILRNLNAAGGGLSATSYRQ
MAGRAGRKGAGRARGEAVLIASNKGQATRATAIMNAGLAAVKSALGPSVD
GGAGMAKMILEGVCGGLVRRKPDLVEYMACSLLFHQTPEGDARENLLDHA
FAALQVLIDEACVQLMPQKRSIAMKPAPAPAPAPAPVPARPAAGGKKLGS
KLPLISPYTRSGLRREPQSRGVAVSVKRVSKVPEGGFVGVADGDDGRLVP
TKLGLAIFRSSMGPAEGLMVYRDLSEAKHGINLRNTLRLAYLLTPLCPPS
GIKPNWERLYALYSRAKSASSAVENTDGRSASLVDDFHKIGITEGHLHLW
ASRGPSAAAKQSPLLSPDLVRRVASTRRGGSSVVIGEAPRRRGDSATASA
AQKAVRLVAAMALKDVSDGYNLGQVAKSYGMNKGDLQSLRQSTATFSSMV
ASFLKELGWTMFLMIVKGYVPRLSLGVSNNLLPLMQQVPGISRTEAGALY
QGGIFNAKSLLAASEERVATALRMNVPFRTRRGESLHSLFAGESIRFERR
AQMLKKAAREMDARR
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mRNA from alignment at H-elongata_contig17302:3..6878+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig17302.4483.1 ID=mRNA_H-elongata_contig17302.4483.1|Name=mRNA_H-elongata_contig17302.4483.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6876bp|location=Sequence derived from alignment at H-elongata_contig17302:3..6878+ (Himanthalia elongata Himel1 dioecious)
GCGATCGAGGCGGCTTTCCGGGCGGGAATATTGAGAGTGCTCGCGGCGAC CTCGACGCTTGGCGCTGGGGTCAACCTTCCCGCGGGGAGGGTTATCCTGC GGAACCTCAACGCTGCCGGAGGGGGGCTGAGTGCCACCAGGTCTGGTCGG GGGTTAGGGGGTCTCGGAATCGTTTTTTTTCTAGTCTGGGCAAATGGCCG CTTCCCTCTTCATAACTACTCCGGATGCACGAATTATATATTATATATTA AACGGGAGTAACACACACATTTGTGAGGTTACAGACAAAGAAAATATGAG AGAAGTCCAAGTCAAATCCGGCGGGGGTAACAGCGGGTTTTTTCTTGCTT TTTTGCTTATATTCGTAGACTAGACGTCCTCGCGGCACACCGCTCGGAAA ATCGAGGCAACCCGGAGAGTCGCACGCGGATTTCAAAACAACGTCCCAAT TTGTTAGTTGGCGCCATGGTTCGTTTTGATCGTAACAGGGAGAGGCTTCA AAACTACCAACTGCTGGACGATCTGCTGGGTAATCATTTCTTGTGTGTGT GTGTGTGTGTGTTTTGTTTTCCCATATAATTTAGTCTCGCGCTCTAGGTC ATTTTCGGGGTGGAGACTGGCTGACACTTTTTTTCCCATATGCGCGCTCC GCTGGGCCGTGCAACCCTCGTTCCCTTGGGTGTGTTCGAACGCCTCCGCG CGTCCAGCTACCGCCAGATGGCGGGCAGGGCCGGTCGGAAGGGGGCCGGG AGGGCTCGCGGGGAAGCGGTCCTGATCGCGTCGAACAAGGGCCAGGCGAC CAGGGCGACAGCGATCATGAACGCCGGTCTCGCCGCGGTCAAGAGGTATC TCTCTGTCTATATATATAACGCGTGTGTGTGTGTATGTGTGTGTGTTTTC ATCCTATTTATTCTCGATGTCATACTTGTGGATGCTCCGGCCGGGGTCGC ACAAGAAGGAGGCCACACATTTTTTTTCCACGTTCCTTGTGTGTTGCTTG CCTTCACTTTTTATAGCGAGAAGGATTCAGCAGTCCCTTTTCCTCGTCGA TCATAAATAGTATGTCGAATTTAGTGTACCTTCGAATAATCGTTTTTCAC TTGTTGGGCGTGATGTAAGACAAATCCCAGTTTGTGTGACTGCGCCCAAG ATTCGAACTCACGTCCCAACGTCAAAAGGTTTCAAAGTTACCAACCGAAC CATCGGGGCGACCGATACAGTGTATGTATATATATTATACTACGAATTAT ATACCAGGGTATAGTGTCTCTGTCCATGTATATAACATACAGTTTAGTAT GTGCATATGTAGTCGCGCGACATTCCAAATGTCGAGGGTAGCGGAGTGCG CGTGTGGATTTTTGAGCTGTGATAACGGAGGGATAATTGACGTGTTGTTT TTTGCCTTAGATTTTTTGCGGCTGAATATCTTTATTGTTTATTTTGTTTG CTTGTTTTTGTGTTTCGTTTACGATGATTCTGCGGCTATTATGTTATTAA TAGTATGGTTATGTTATTAATAGTATGGTTTTATGTATTTGTGGTGGGAG GGGGGGGGGGGGGGGCATTTGAAAAAGAGAAGCACATCTGGCAAGCGCGC GCCCTTGAAGTCTTCTCGCGCGGTGGTTTCAGAGCGGACAACCTTGCGTG CACGACGTGGATTGAGCTAAAGATCGTAATATATTGTATGTGCTGGTGGA TAAGAGGCTGCCCGCATCTCGGATCAAAGATTGCGCTCGATCGTAGAAAG GACATGTCTATGTACACCTTCGTTGCATCATATTTCAAAACCGTCTTCTG TACTCGGCTGCCTCCGAAATCCTCGCGGTGTGATTTCAGTGCCCTCGGAC CCTCGGTCGACGGGGGCGCGGGGATGGCCAAGATGATTCTGGAAGGGGTG TGTGGCGGGCTCGTGAGGAGGAAGCCCGACTTAGGTAAGTGCGCGCGTGC GTGTGTAACAGGGTGGGATCGAAAGGGATGTGGGGTTGGCTAGTGAGTGT TGGAAACATGTATATGTTGGAGGTCAAGCTCGAATGTGCAGCATGTGTGT GTGCGTGTGTGTGTTTCAGTGTTTGTGCAAGTATATATGTGTTTGTGGAC ACTGCAGGAAACTTAATACACGTTCACGCATGAAAAACATGCGTGGTTCG CGGTATGGGAGGCATCCTCGTCAACTACATCAGCAGTTGTTCACGAAAGC CCTTTCTCCGCTGCTGCTGCGCTCCTCCATGCTCCGCACGCCTAGTCGAG TACATGGCCTGCTCCCTGCTTTTCCACCAAACACCCGAAGGAGACGCCCG CGAGAACCTCCTCGATCATGCCTTCGCGGCCCTACAGGTCTTGATCGACG AAGCGTGCGTCCAGCTCATGCCGCAGAAACGATCGATCGCGATGAAGCCG GCTCCGGCTCCGGCCCCAGCGCCAGCTCCAGTCCCAGCGCGACCAGCCGC AGGCGGAAAAAAGCTAGGATCCAAATTGCCACTAATTTCTCCCTACACCC GGTCGGGACTGCGACGAGAACCGCAGTCGAGAGGCGTCGCCGTGTCCGTG AAACGGGTTTCCAAGGTTCCGGAAGGTGGTTTTGTTGGCGTTGCTGATGG GGATGACGGACGGTTGGTGCCCACGAAGCTGGGGCTGGCTATCTTCCGGA GCTCGATGGGGCCTGCCGAGGGCCTAATGGTCTACAGGGACCTTTCCGGT GTGACGAAATCTTCCACAAAACGGCTTGTTTATACGCCGTTGATCGATCT CACCCCTTTACTATATATATACATTTATTTATTTATTTTTCTCGTCGTAT TCTGACGTCTCGGCTAACCAGCCATTCCGATGGCCTTCGTCTTTATATCT ATTTGACAAGAGCTTTAGCTTCTTCTCCGTCAGAGGTGACAAAAAAATAT CGTGCTATAGGGGAGGGAGAACATGTGTGTAGGCGGCAGCAATCCCCTCA CGGGGATCGCCGTCCCCGGCCGCTTGCTGTCGGCAACACCTTTTGCTGTA TCAGTCTCAAAAGGCAAAATCTAGCGCCTGTGACGTCGTTGTTGCACTCC CCGGCGAAGCCATCGGCGAAACCATCGGCGAAACCATCGGCGAGGTGGGT TCGTGCGCCTTTACCCAGAGTAATTAGGGCGGGTATTAACGTATTAACGG GGTTACAAAAATTAAAATTCCACCCGATTTAAATTTAAATCGTCTGGAAT TTTAATTTTTGTAACCCCGTTAAGACCCGGCCTTACCACGTATGCTTTGT CATTTCGTTTTTCCTTTTTATTTCAATGTACGCGCGCTCGCTATCTAACG CTGATACCCGCCTCCTGCTACCATGTGGCCAACATCGATACATATATATT TATATATATATATATATATATATATATATTATGGCTTGGTCAAAAACGGA TCCGCGTAATCACGCGTCAGAGGCCAAGCACGGGATCAACCTGCGCAACA CGCTCCGCTTGGCCTACTTGCTTACGCCACTCTGCCCCCCGTCTGGGATC AAACCGAACTGGGAACGGCTGTACGCGGTGAGTAAGTAAGTAAGTAAGTA AGTGTGTTGTGCGGCGGTTGGTCACGGAGAAATGTATCGCCGACACTCGT CGAGAGTGCAGAAAGACGACGGCGGTGCTGCGTGCCCAGTCTTATCCTAT CGTCTGTTTGGCCAAGTGTTTTTATCTTTCTGAAGCTTGGTACAAACAAG CAGTAAAATAAACTATTATACATCTCTCGATCGCGACTTCTATTTTTATT GTTGTTGTTTTTAATCTGTTTGGCGGGGATAGCTGTACTCCCGAGCTAAA TCCGCCTCCTCAGCGGTGGAAAACACAGACGGACGGAGCGCCTCTCTAGT GGACGACTTCCATAAGATCGGTATCACCGAGGGCCATCTCCACCTATGGG CTTCAAGGGGTCCGAGCGCCGCGGCCAAACAGAGCCCCCTCTTGTCGCCC GACCTCGTGCGACGGGTTGCATCTACTAGACGCGGTGGTTCATCGGTGGT TATTGGAGAAGCACCTCGCCGGTGGGTTAGTGTCTGTATTGCTGGCATGC GCCTGGAGTATAGGAGGGGACATTGAGGGAGCGAGAGACTTTTCGTCCTC ACCAAGAGCAACACGTTGTTGTAGTCCAACAATCGGCGTGCCCCGAGGTC ACGATCTTCTCGCCGCCAACCCTCCCCCCGCGTCCCCCCACCTCCCCCAC AAAAAAAAAAAAAAAAAAACCCCCCCCCCCCCCCCCCCNNNNNNNNNNAT CGGCGTGCCCCGACCTCCACATCTTCTCCCCGCCACCCATCCCGCCCCCC CCCCCACCCCCCCCCAAAAAAAAAAAAAAAATGCTCGTGCTGACCAGGAT AGATTTTCGTTGGTTGATAGTGATGATCCTTGAGCAGGAGCAGTGCCACG GACATGTTCGATGGGTTTGAATGAGTTCATAAGTTTTGAAAGAAAAGCAT ACACACGGTCACACATGCGCATCCCTGCCTCTGCCTCTAGCAAAGATACA CCAATCCGTGCTTTTGTTTCCTCCTTCTTACCACACGCGAGATATCCCAC TTCACCTTCCTCCGCGATGAATCTTCTCTCTACATACATGTTATAATATG TGTACTAAACCAGGCGCGGTGACAGTGCGACGGCCAGCGCGGCGCAGAAA GCGGTGCGCCTCGTCGCGGCGATGGCACTCAAGGATGTCAGCGACGGCTA CAACCTCGGACAGGTGAGGGTGGGTGGGTGGGTGGGTGGTGTGCGTGCAC TTATTAGCTAGACGTGATAGGTCTAGCTCTTGGCGTCGTGCTTGGTCGCG GCCTCCCTGAGGGGGGTGTTACACGGATACAGCCTGAGAGATGAGGGGGG AGCGGGGATACCACGCCATTATGGTGTCTGGATTATATTGTCCCAGATCG TTCCACGCCATACCATATCATACCAAGTTATACCATGCCGCTATCACACC ATGTCATACCACCCTGAACCATATCGAGTCGTGTCACCCACCACATCATG CAATATTGTGTACCATATTGTACCATATTAGGTGGCCAAGTCTTACGGGA TGAACAAAGGGGACTTGCAGAGCTTGCGGCAATCCACGGCGACCTTCTCT TCCATGGTGGCGTCGTTCCTCAAGGTGTCGCCGTCAGAAGCTCTCGTTTC CCTCACCGGTCGAACGCGTGGCCTCATTTCCTTTTTAAAAGTTTTCCCTG CACAACTTTGCTGTTGCACAATGGTTGCCTTGGCTCTAGAAACAAACCGT GTACCTAAGTCTTATCGTTGTTGCCTATCATGATCGCTGCTCAACCAGGA GCTAGGGTGGACGATGTTCCTCATGATCGTCAAGGGCTACGTCCCTAGGC TCAGCCTGGGCGTGAGCAACAACCTCCTGCCCCTCATGCAGGTGCGGGAG CCGGTATTTATTCCTCGCGAGGGTAGGGGGGGGGATAGGGGGTCGTAATA ACGGTGATGGTGCGTCTGCCTCATACTGGGAAACCCGGTCGAGGAATCCA GGCGCGAGACGATCTAGTTAGGTTCGCGCTCCGGCATCCTATCACAACGC CCTTCACTCAACACCCTCACCAAACGGTGTCGCAAGTCGTTATCCCATCT CACGCGTCACGTCGGATCGCGCTTGCCCTTCTCCTTTCTTCTCTATTTGA AGCGAAACGCCTACACACACTCACCACCCACAGCAGCCTACAAAAATGAT GATATAACATAATACTGTATAGATCTATATAGCTATATATATATATATAT ATATATACCAGTATAGCTTGTTTTTATTACTGTGAGTGATATATTGATGC CCACGTCCGTCTAAAAGCAGGTGCCGGGCATCTCCCGAACGGAAGCCGGC GCGCTCTACCAAGGCGGCATCTTCAACGCCAAGAGTCTGCTGGCGGCGTC GGAAGAAAGGGTGGCGACAGCTCTGAGGATGAATGTCCCGTTCCGCACCA GAAGGGGTGAGAGCCTCCACAGCCGTGTCGTGTCCTGTCCTGTTCTTTCC TGTACCCTGCTGCAAGCGATATTGTATTTATTGGTTACATGGTAGTCAAT CCATTACAGCTCGGCTCAAGGCCGGAAAGGATTCGGGTGCGCCCAAGTGG CGTCTCTATGAAGGGGGGATGTTTCGCCCTCCGTCGATTCAGATTTGCCT CTTTCTAGTTTCTAGTGTTAATATTGAATAGTATTCTAGTATAGCAGGTA AATAGTATTCTAGTAGATGCGACCTTCCTCCTGCATACCATAGTCGCCGT CGCCGTAAGACCGTTGAGGGTTTAGAGGAGAGTATCGAGGCTTTCCTTGC GTTGGAGATGGTTAACCCACGGCCTCTCTCGAGTCTACAATTATTATATG ATTATATTCATTCTAAGACGCGAACAAAGACAGGGAGAAAATAATTTTCC CTGTCCAGCTGACCACGACCAGGATGACAACCATATCCGGTTGATCCATA CTAAAGCCTATATACTATACTATACTATACTATACTATACTATACTATAC TATACTATACTATACTGCTATATATTATGTGATGACCATATTATACTATA TATTGTATACTATACTATATACTATATACTATACTATACTATACCTTATG TGATGACCATACATACAGAGAGTGTGTCCCCTTTGTCGCGTTTGATCAGA GGTTTTCAGAATAAGTATCATTGATCACCCCTAGNNNNNNNNNNAAATAC ACACACACACACACACACACACACACACACACACATAGACCGGTCTATGC TTTAGAAGAAATTTTCCACCTCTGTTTTTCCACGCGGTAATGCCAGTATT CGCCGGTGAGAGTATTCGCTTCGAGAGGCGAGCACAGATGCTCAAGAAAG CTGCAAGGGAGATGGACGCCAGGAGG
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Coding sequence (CDS) from alignment at H-elongata_contig17302:3..6878+

>mRNA_H-elongata_contig17302.4483.1 ID=mRNA_H-elongata_contig17302.4483.1|Name=mRNA_H-elongata_contig17302.4483.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3390bp|location=Sequence derived from alignment at H-elongata_contig17302:3..6878+ (Himanthalia elongata Himel1 dioecious)
GCGATCGAGGCGGCTTTCCGGGCGGGAATATTGAGAGTGCTCGCGGCGAC
CTCGACGCTTGGCGCTGGGGTCAACCTTCCCGCGGGGAGGGTTATCCTGC
GGAACCTCAACGCTGCCGGAGGGGGGCTGAGTGCCACCAGGCGATCGAGG
CGGCTTTCCGGGCGGGAATATTGAGAGTGCTCGCGGCGACCTCGACGCTT
GGCGCTGGGGTCAACCTTCCCGCGGGGAGGGTTATCCTGCGGAACCTCAA
CGCTGCCGGAGGGGGGCTGAGTGCCACCAGCTACCGCCAGATGGCGGGCA
GGGCCGGTCGGAAGGGGGCCGGGAGGGCTCGCGGGGAAGCGGTCCTGATC
GCGTCGAACAAGGGCCAGGCGACCAGGGCGACAGCGATCATGAACGCCGG
TCTCGCCGCGGTCAAGAGCTACCGCCAGATGGCGGGCAGGGCCGGTCGGA
AGGGGGCCGGGAGGGCTCGCGGGGAAGCGGTCCTGATCGCGTCGAACAAG
GGCCAGGCGACCAGGGCGACAGCGATCATGAACGCCGGTCTCGCCGCGGT
CAAGAGTGCCCTCGGACCCTCGGTCGACGGGGGCGCGGGGATGGCCAAGA
TGATTCTGGAAGGGGTGTGTGGCGGGCTCGTGAGGAGGAAGCCCGACTTA
GTGCCCTCGGACCCTCGGTCGACGGGGGCGCGGGGATGGCCAAGATGATT
CTGGAAGGGGTGTGTGGCGGGCTCGTGAGGAGGAAGCCCGACTTAGTCGA
GTACATGGCCTGCTCCCTGCTTTTCCACCAAACACCCGAAGGAGACGCCC
GCGAGAACCTCCTCGATCATGCCTTCGCGGCCCTACAGGTCTTGATCGAC
GAAGCGTGCGTCCAGCTCATGCCGCAGAAACGATCGATCGCGATGAAGCC
GGCTCCGGCTCCGGCCCCAGCGCCAGCTCCAGTCCCAGCGCGACCAGCCG
CAGGCGGAAAAAAGCTAGGATCCAAATTGCCACTAATTTCTCCCTACACC
CGGTCGGGACTGCGACGAGAACCGCAGTCGAGAGGCGTCGCCGTGTCCGT
GAAACGGGTTTCCAAGGTTCCGGAAGGTGGTTTTGTTGGCGTTGCTGATG
GGGATGACGGACGGTTGGTGCCCACGAAGCTGGGGCTGGCTATCTTCCGG
AGCTCGATGGGGCCTGCCGAGGGCCTAATGGTCTACAGGGACCTTTCCGT
CGAGTACATGGCCTGCTCCCTGCTTTTCCACCAAACACCCGAAGGAGACG
CCCGCGAGAACCTCCTCGATCATGCCTTCGCGGCCCTACAGGTCTTGATC
GACGAAGCGTGCGTCCAGCTCATGCCGCAGAAACGATCGATCGCGATGAA
GCCGGCTCCGGCTCCGGCCCCAGCGCCAGCTCCAGTCCCAGCGCGACCAG
CCGCAGGCGGAAAAAAGCTAGGATCCAAATTGCCACTAATTTCTCCCTAC
ACCCGGTCGGGACTGCGACGAGAACCGCAGTCGAGAGGCGTCGCCGTGTC
CGTGAAACGGGTTTCCAAGGTTCCGGAAGGTGGTTTTGTTGGCGTTGCTG
ATGGGGATGACGGACGGTTGGTGCCCACGAAGCTGGGGCTGGCTATCTTC
CGGAGCTCGATGGGGCCTGCCGAGGGCCTAATGGTCTACAGGGACCTTTC
CGAGGCCAAGCACGGGATCAACCTGCGCAACACGCTCCGCTTGGCCTACT
TGCTTACGCCACTCTGCCCCCCGTCTGGGATCAAACCGAACTGGGAACGG
CTGTACGCGAGGCCAAGCACGGGATCAACCTGCGCAACACGCTCCGCTTG
GCCTACTTGCTTACGCCACTCTGCCCCCCGTCTGGGATCAAACCGAACTG
GGAACGGCTGTACGCGCTGTACTCCCGAGCTAAATCCGCCTCCTCAGCGG
TGGAAAACACAGACGGACGGAGCGCCTCTCTAGTGGACGACTTCCATAAG
ATCGGTATCACCGAGGGCCATCTCCACCTATGGGCTTCAAGGGGTCCGAG
CGCCGCGGCCAAACAGAGCCCCCTCTTGTCGCCCGACCTCGTGCGACGGG
TTGCATCTACTAGACGCGGTGGTTCATCGGTGGTTATTGGAGAAGCACCT
CGCCGCTGTACTCCCGAGCTAAATCCGCCTCCTCAGCGGTGGAAAACACA
GACGGACGGAGCGCCTCTCTAGTGGACGACTTCCATAAGATCGGTATCAC
CGAGGGCCATCTCCACCTATGGGCTTCAAGGGGTCCGAGCGCCGCGGCCA
AACAGAGCCCCCTCTTGTCGCCCGACCTCGTGCGACGGGTTGCATCTACT
AGACGCGGTGGTTCATCGGTGGTTATTGGAGAAGCACCTCGCCGGCGCGG
TGACAGTGCGACGGCCAGCGCGGCGCAGAAAGCGGTGCGCCTCGTCGCGG
CGATGGCACTCAAGGATGTCAGCGACGGCTACAACCTCGGACAGGCGCGG
TGACAGTGCGACGGCCAGCGCGGCGCAGAAAGCGGTGCGCCTCGTCGCGG
CGATGGCACTCAAGGATGTCAGCGACGGCTACAACCTCGGACAGGTGGCC
AAGTCTTACGGGATGAACAAAGGGGACTTGCAGAGCTTGCGGCAATCCAC
GGCGACCTTCTCTTCCATGGTGGCGTCGTTCCTCAAGGTGGCCAAGTCTT
ACGGGATGAACAAAGGGGACTTGCAGAGCTTGCGGCAATCCACGGCGACC
TTCTCTTCCATGGTGGCGTCGTTCCTCAAGGAGCTAGGGTGGACGATGTT
CCTCATGATCGTCAAGGGCTACGTCCCTAGGCTCAGCCTGGGCGTGAGCA
ACAACCTCCTGCCCCTCATGCAGGAGCTAGGGTGGACGATGTTCCTCATG
ATCGTCAAGGGCTACGTCCCTAGGCTCAGCCTGGGCGTGAGCAACAACCT
CCTGCCCCTCATGCAGCAGGTGCCGGGCATCTCCCGAACGGAAGCCGGCG
CGCTCTACCAAGGCGGCATCTTCAACGCCAAGAGTCTGCTGGCGGCGTCG
GAAGAAAGGGTGGCGACAGCTCTGAGGATGAATGTCCCGTTCCGCACCAG
AAGGGGTGAGAGCCTCCACAGCCCAGGTGCCGGGCATCTCCCGAACGGAA
GCCGGCGCGCTCTACCAAGGCGGCATCTTCAACGCCAAGAGTCTGCTGGC
GGCGTCGGAAGAAAGGGTGGCGACAGCTCTGAGGATGAATGTCCCGTTCC
GCACCAGAAGGGGTGAGAGCCTCCACAGCCTATTCGCCGGTGAGAGTATT
CGCTTCGAGAGGCGAGCACAGATGCTCAAGAAAGCTGCAAGGGAGATGGA
CGCCAGGAGGTATTCGCCGGTGAGAGTATTCGCTTCGAGAGGCGAGCACA
GATGCTCAAGAAAGCTGCAAGGGAGATGGACGCCAGGAGG
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