mRNA_H-elongata_contig105402.448.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig105402.448.1 vs. uniprot
Match: A0A1Y1IK20_KLENI (DUF659 domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IK20_KLENI) HSP 1 Score: 65.9 bits (159), Expect = 1.300e-10 Identity = 30/71 (42.25%), Postives = 45/71 (63.38%), Query Frame = 1
Query: 19 CAAHAVDLLLKDLGNLGFFADTLKRINKVVKFVKNHHGTSAIYESHTNLRLITPCATRFATNVIVAMHMLK 231
C AH +DL L+D+G + + TLK +VKF+ NHH T A++ H++L L+ P TRFAT+ I +L+
Sbjct: 292 CVAHGMDLALEDVGKEEWVSPTLKAARDLVKFITNHHKTIALFRQHSDLELLKPGDTRFATSFITLERLLE 362
BLAST of mRNA_H-elongata_contig105402.448.1 vs. uniprot
Match: A0A388LT59_CHABU (DUF659 domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LT59_CHABU) HSP 1 Score: 63.2 bits (152), Expect = 1.180e-9 Identity = 28/70 (40.00%), Postives = 44/70 (62.86%), Query Frame = 1
Query: 19 CAAHAVDLLLKDLGNLGFFADTLKRINKVVKFVKNHHGTSAIYESHTNLRLITPCATRFATNVIVAMHML 228
C AH +DL+L+D+G++G+ A + + V KF H+ T E+ T L+L+ P TRF+TNVI+ +L
Sbjct: 60 CVAHVMDLILEDIGSIGWVASPIAQARLVTKFFNRHNHTREALETKTKLKLLLPTKTRFSTNVIMMRRLL 129
BLAST of mRNA_H-elongata_contig105402.448.1 vs. uniprot
Match: A0A388M3U7_CHABU (Integrase catalytic domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388M3U7_CHABU) HSP 1 Score: 63.2 bits (152), Expect = 1.200e-9 Identity = 28/72 (38.89%), Postives = 43/72 (59.72%), Query Frame = 1
Query: 13 MKCAAHAVDLLLKDLGNLGFFADTLKRINKVVKFVKNHHGTSAIYESHTNLRLITPCATRFATNVIVAMHML 228
++C AH +DL+L+D+G++G+ A + + V KF K H E T L+L+ P TRF TNVI+ +L
Sbjct: 555 IRCVAHVMDLILEDIGSIGWVASRIAQARLVTKFFKRHSHAREALEKKTKLKLLLPAETRFGTNVIMIRRLL 626
BLAST of mRNA_H-elongata_contig105402.448.1 vs. uniprot
Match: A0A804HMU3_MUSAM (DUF659 domain-containing protein n=1 Tax=Musa acuminata subsp. malaccensis TaxID=214687 RepID=A0A804HMU3_MUSAM) HSP 1 Score: 62.4 bits (150), Expect = 2.130e-9 Identity = 32/82 (39.02%), Postives = 45/82 (54.88%), Query Frame = 1
Query: 19 CAAHAVDLLLKDLGNLGFFADTLKRINKVVKFVKNHHGTSAIYESHTNLRLITPCATRFATNVIVAM------HMLKASVSS 246
CAAH +D++LKD+G L + R + KF+ NHH A+ +++ N ++ P TRFATN I H LKA SS
Sbjct: 221 CAAHCIDIMLKDIGELDAVKKCVARAQSITKFIYNHHWVHALMQNYVNGEILRPGITRFATNFIALKSLQQKRHGLKAMGSS 302
BLAST of mRNA_H-elongata_contig105402.448.1 vs. uniprot
Match: A0A388LA56_CHABU (DUF659 domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LA56_CHABU) HSP 1 Score: 62.4 bits (150), Expect = 2.170e-9 Identity = 27/71 (38.03%), Postives = 43/71 (60.56%), Query Frame = 1
Query: 19 CAAHAVDLLLKDLGNLGFFADTLKRINKVVKFVKNHHGTSAIYESHTNLRLITPCATRFATNVIVAMHMLK 231
C AH +DL+L+D+G++G+ A + + + KF K H E+ T L+L+ P TRF TNVI+ +L+
Sbjct: 130 CVAHVMDLVLEDIGSIGWVASRIAQARLITKFFKRHSHACEALEAKTKLKLLLPAETRFGTNVIMIRRLLE 200
BLAST of mRNA_H-elongata_contig105402.448.1 vs. uniprot
Match: A0A388LG72_CHABU (DUF659 domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LG72_CHABU) HSP 1 Score: 61.2 bits (147), Expect = 5.720e-9 Identity = 27/70 (38.57%), Postives = 41/70 (58.57%), Query Frame = 1
Query: 19 CAAHAVDLLLKDLGNLGFFADTLKRINKVVKFVKNHHGTSAIYESHTNLRLITPCATRFATNVIVAMHML 228
C AH +DL+L+D+G++G+ A + + V KF K H E T ++L+ P TRF TNVI+ +L
Sbjct: 344 CVAHVMDLILEDIGSIGWVASRIAQARLVTKFFKRHSHAREALEKKTKMKLLLPAETRFGTNVIMIRRLL 413
BLAST of mRNA_H-elongata_contig105402.448.1 vs. uniprot
Match: A0A6U2CN76_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A6U2CN76_9CHLO) HSP 1 Score: 60.1 bits (144), Expect = 1.400e-8 Identity = 29/81 (35.80%), Postives = 49/81 (60.49%), Query Frame = 1
Query: 13 MKCAAHAVDLLLKDLGNLGFFADTLKRINKVVKFVKNHHGTSAIYE--------SHTNLRLITPCATRFATNVIVAMHMLK 231
++C+ H V+L+LKD+G LG+ A LK+ + VKF++NHH A+ H + L++P TRF T+V++ +L+
Sbjct: 69 VRCSTHGVNLMLKDVGKLGWAAKWLKKARQCVKFLRNHHKPQALVRMFSSRMSNEHKDKELLSPGNTRFGTSVLMLGRLLE 149
BLAST of mRNA_H-elongata_contig105402.448.1 vs. uniprot
Match: A0A388K883_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K883_CHABU) HSP 1 Score: 58.9 bits (141), Expect = 3.720e-8 Identity = 27/70 (38.57%), Postives = 40/70 (57.14%), Query Frame = 1
Query: 19 CAAHAVDLLLKDLGNLGFFADTLKRINKVVKFVKNHHGTSAIYESHTNLRLITPCATRFATNVIVAMHML 228
C AH +DL+L+D+G++G+ A + + V KF K E T L+L+ P TRF TNVI+ +L
Sbjct: 299 CVAHVMDLILEDIGSIGWVASRIAQARLVTKFFKRQSHAREALEKKTKLKLLLPAETRFGTNVIMIRRLL 368
BLAST of mRNA_H-elongata_contig105402.448.1 vs. uniprot
Match: A0A426WWC4_ENSVE (Uncharacterized protein n=1 Tax=Ensete ventricosum TaxID=4639 RepID=A0A426WWC4_ENSVE) HSP 1 Score: 58.5 bits (140), Expect = 4.860e-8 Identity = 25/63 (39.68%), Postives = 37/63 (58.73%), Query Frame = 1
Query: 22 AAHAVDLLLKDLGNLGFFADTLKRINKVVKFVKNHHGTSAIYESHTNLRLITPCATRFATNVI 210
AAH +DL+LKD+G L + R + KF+ NHH ++ + + N ++ P TRFATN I
Sbjct: 89 AAHCIDLMLKDIGELDMVKKCVARAQSITKFIYNHHWVHSLMQKYVNDEILRPGVTRFATNFI 151
BLAST of mRNA_H-elongata_contig105402.448.1 vs. uniprot
Match: A0A388JSR0_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JSR0_CHABU) HSP 1 Score: 58.2 bits (139), Expect = 6.880e-8 Identity = 27/62 (43.55%), Postives = 38/62 (61.29%), Query Frame = 1
Query: 19 CAAHAVDLLLKDLGNLGFFADTLKRINKVVKFVKNHHGTSAIYES-HTNLRLITPCATRFAT 201
C AH LLLKDL NL + DT+K+ N +VKF++NHH T + + +L L+ P RF +
Sbjct: 402 CGAHCCSLLLKDLSNLPWVKDTVKKANTIVKFIRNHHSTHGLMMTIDDSLSLLRPTEVRFGS 463 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig105402.448.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig105402.448.1 >prot_H-elongata_contig105402.448.1 ID=prot_H-elongata_contig105402.448.1|Name=mRNA_H-elongata_contig105402.448.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=87bp MTGMKCAAHAVDLLLKDLGNLGFFADTLKRINKVVKFVKNHHGTSAIYESback to top mRNA from alignment at H-elongata_contig105402:1569..1832- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig105402.448.1 ID=mRNA_H-elongata_contig105402.448.1|Name=mRNA_H-elongata_contig105402.448.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=264bp|location=Sequence derived from alignment at H-elongata_contig105402:1569..1832- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig105402:1569..1832- >mRNA_H-elongata_contig105402.448.1 ID=mRNA_H-elongata_contig105402.448.1|Name=mRNA_H-elongata_contig105402.448.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=522bp|location=Sequence derived from alignment at H-elongata_contig105402:1569..1832- (Himanthalia elongata Himel1 dioecious)back to top |