prot_H-elongata_contig172913.4478.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig172913.4478.1
Unique Nameprot_H-elongata_contig172913.4478.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length64
Homology
BLAST of mRNA_H-elongata_contig172913.4478.1 vs. uniprot
Match: D8LNA4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNA4_ECTSI)

HSP 1 Score: 94.4 bits (233), Expect = 2.320e-22
Identity = 45/64 (70.31%), Postives = 56/64 (87.50%), Query Frame = 0
Query:    1 MSQCPHCFVGQCQKHRLQDHGRREAQLKAKMADPKATQRKLYEAIVTKQLDKLEAAARIASASE 64
            MSQCPHCFVGQCQ+H+LQDHG+RE  LK+KM DPKA Q++L++ +VT QLDKLEAAAR A+A +
Sbjct:    1 MSQCPHCFVGQCQRHKLQDHGKRELLLKSKMVDPKAAQQRLFDRVVTAQLDKLEAAARGANAGD 64          
BLAST of mRNA_H-elongata_contig172913.4478.1 vs. uniprot
Match: A0A6H5K6N1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6N1_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 9.730e-22
Identity = 45/64 (70.31%), Postives = 56/64 (87.50%), Query Frame = 0
Query:    1 MSQCPHCFVGQCQKHRLQDHGRREAQLKAKMADPKATQRKLYEAIVTKQLDKLEAAARIASASE 64
            MSQCPHCFVGQCQ+H+LQDHG+RE  LK+KM DPKA Q++L++ +VT QLDKLEAAAR A+A +
Sbjct:    1 MSQCPHCFVGQCQRHKLQDHGKRELLLKSKMVDPKAAQQRLFDRVVTAQLDKLEAAARGANAGD 64          
BLAST of mRNA_H-elongata_contig172913.4478.1 vs. uniprot
Match: A0A836CMD5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMD5_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 1.440e-9
Identity = 29/55 (52.73%), Postives = 39/55 (70.91%), Query Frame = 0
Query:    1 MSQCPHCFVGQCQKHRLQDHGRREAQLKAKMADPKATQRKLYEAIVTKQLDKLEA 55
            MSQC  CFVGQC++H LQDHG+R   L AK+     T +++YE ++ KQ+DK EA
Sbjct:    1 MSQCGACFVGQCKRHPLQDHGKRTKDLMAKLPSKSETLKRVYETLLKKQVDKFEA 55          
BLAST of mRNA_H-elongata_contig172913.4478.1 vs. uniprot
Match: A0A7S4D5P9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D5P9_HETAK)

HSP 1 Score: 58.2 bits (139), Expect = 4.320e-9
Identity = 30/56 (53.57%), Postives = 40/56 (71.43%), Query Frame = 0
Query:    1 MSQCPHCFVGQCQKHRLQDHGRREAQLKAKMA-DPKATQRKLYEAIVTKQLDKLEA 55
            MS CP C+VG C+ H+LQDHGRRE +LK K   + K   +K+YE +V+ QL K+EA
Sbjct:    1 MSHCPTCWVGLCKVHKLQDHGRREKELKKKAGIENKEKLKKIYENLVSSQLSKMEA 56          
BLAST of mRNA_H-elongata_contig172913.4478.1 vs. uniprot
Match: W7T9Z9_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T9Z9_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 9.700e-8
Identity = 28/64 (43.75%), Postives = 42/64 (65.62%), Query Frame = 0
Query:    1 MSQCPHCFVGQCQKHRLQDHGRREAQLKAKMADPKATQRKLYEAIVTKQLDKLEAAARIASASE 64
            MS CP C+VGQC+KH+LQDHG RE   +A ++     QR+LYE++V   +D L+   +  + +E
Sbjct:    1 MSSCPQCYVGQCRKHKLQDHGARE---RALLSSRSELQRRLYESLVQPHVDTLKTTKKATAEAE 61          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig172913.4478.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LNA4_ECTSI2.320e-2270.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K6N1_9PHAE9.730e-2270.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CMD5_9STRA1.440e-952.73Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4D5P9_HETAK4.320e-953.57Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
W7T9Z9_9STRA9.700e-843.75Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig172913contigH-elongata_contig172913:905..1096 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig172913.4478.1mRNA_H-elongata_contig172913.4478.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig172913 905..1096 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig172913.4478.1 ID=prot_H-elongata_contig172913.4478.1|Name=mRNA_H-elongata_contig172913.4478.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=64bp
MSQCPHCFVGQCQKHRLQDHGRREAQLKAKMADPKATQRKLYEAIVTKQL
DKLEAAARIASASE
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