prot_H-elongata_contig172885.4475.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig172885.4475.1
Unique Nameprot_H-elongata_contig172885.4475.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length261
Homology
BLAST of mRNA_H-elongata_contig172885.4475.1 vs. uniprot
Match: A0A7S6UA20_9STRA (30S ribosomal protein S7, chloroplastic n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6UA20_9STRA)

HSP 1 Score: 289 bits (740), Expect = 7.540e-97
Identity = 147/153 (96.08%), Postives = 151/153 (98.69%), Query Frame = 0
Query:  108 KDRRQRQFPKPDPVYNSFLVSLFTSKILKNGKKTLATRIIEETFSIIQQRTSEEPLKIFERAVKNVCPSLQVKAKRVGGSTYQVPKEVNKFKGINLALCWIIRFARNRSGPTIAIKLANEIIEASKGSGNSIRKKEETHRMAKSNKAFAHFRS 260
            +  ++R+FPKPDPVYNSFLVSLFTSKILKNGKKTLATRIIEETFSIIQQRTSEEPLKIFERAVKNVCPSLQVKAKRVGGSTYQVPKEVNKFKGINLALCWIIRFARNRSGPTIAIKLANEIIEASKGSGNSIRKKEETHRMAKSNKAFAHFRS
Sbjct:    4 RSNKKREFPKPDPVYNSFLVSLFTSKILKNGKKTLATRIIEETFSIIQQRTSEEPLKIFERAVKNVCPSLQVKAKRVGGSTYQVPKEVNKFKGINLALCWIIRFARNRSGPTIAIKLANEIIEASKGSGNSIRKKEETHRMAKSNKAFAHFRS 156          
BLAST of mRNA_H-elongata_contig172885.4475.1 vs. uniprot
Match: A0A812SXH1_SYMMI (Ribosomal protein S7 n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812SXH1_SYMMI)

HSP 1 Score: 292 bits (747), Expect = 3.650e-96
Identity = 147/273 (53.85%), Postives = 203/273 (74.36%), Query Frame = 0
Query:    1 MPTIQQLVRTTRKKVQTRTKSPALKNCPQRRGVCTRVYTITPKKPNSAIRKVARVRLTSGFEVTAYIPGIGHNLQEHSVVLLRGGRVKDLPGVRYHVVRGTLDSIGVKDRRQRQFPK--------------PDPVYNSFLVSLFTSKILKNGKKTLATRIIEETFSIIQQRTSEEPLKIFERAVKNVCPSLQVKAKRVGGSTYQVPKEVNKFKGINLALCWIIRFARNRSGPTIAIKLANEIIEASKGSGNSIRKKEETHRMAKSNKAFAHFR 259
            MPTI QL+R  RK    R K PAL+ CPQ+RGVCTRVYT TPKKPNSA+RKVARVRLT+GFEVT+YIPG GHNLQEHSVV++RGGRVKDLPGVRYH++RGTLD+ GVKDRRQR+                 PDP +   ++S F + ++ +GKK++A  I+      +Q+R  ++P+++F  A+ NV P ++V+++RVGG+TYQVP EV   +G  LA+ W+I  +R+RS  T+  +LA E+++AS   G++++K+E+THRMA++NKAF+H+R
Sbjct:    1 MPTINQLIRKPRKPEVVRNKVPALEACPQKRGVCTRVYTTTPKKPNSALRKVARVRLTNGFEVTSYIPGEGHNLQEHSVVMIRGGRVKDLPGVRYHIIRGTLDTQGVKDRRQRRSKYGMSRRHRAEKREVLPDPKFGDIVLSKFMNCLMYDGKKSVAEGIVYGALDRVQERGGQDPVRVFHEALDNVKPDIEVRSRRVGGATYQVPVEVRHDRGQALAIRWLISASRSRSELTMTERLAGELMDASNNRGSAVKKREDTHRMAEANKAFSHYR 273          
BLAST of mRNA_H-elongata_contig172885.4475.1 vs. uniprot
Match: R6G9Q3_9BIFI (Multifunctional fusion protein n=28 Tax=Bacteria TaxID=2 RepID=R6G9Q3_9BIFI)

HSP 1 Score: 281 bits (718), Expect = 2.700e-91
Identity = 152/306 (49.67%), Postives = 206/306 (67.32%), Query Frame = 0
Query:    1 MPTIQQLVRTTRKKVQTRTKSPALKNCPQRRGVCTRVYTITPKKPNSAIRKVARVRLTSGFEVTAYIPGIGHNLQEHSVVLLRGGRVKDLPGVRYHVVRGTLDSIGVKDRRQRQ-------------------------FPK----------------------PDPVYNSFLVSLFTSKILKNGKKTLATRIIEETFSIIQQRTSEEPLKIFERAVKNVCPSLQVKAKRVGGSTYQVPKEVNKFKGINLALCWIIRFARNRSGPTIAIKLANEIIEASKGSGNSIRKKEETHRMAKSNKAFAHFR 259
            MPTI+QLVR  R+    ++K+ ALK  P RRGVCTRVYT TPKKPNSA+RKVARVRL+SG EVTAYIPG GHNLQEHS+VL+RGGRVKDLPGVRYH+VRG LD+ GVKDR+Q +                         FP                       PDP+Y S +V+   +KIL +GKK++A  I+     +++++T +EP+ + +RA+ N+ PSL+V+++RVGG+TYQVP EV   +   L+L W+  F+R R   T+A +LANEI++AS G G S++++E+TH+MA++NKAFAH+R
Sbjct:    1 MPTIEQLVRKGRQAKPKKSKTLALKGSPLRRGVCTRVYTTTPKKPNSALRKVARVRLSSGIEVTAYIPGEGHNLQEHSIVLVRGGRVKDLPGVRYHIVRGALDTQGVKDRKQGRSLYGAKKHRAWRARYPGCQGPQAGSFPVRSKEGEVREMSRKGPAKKHQLLPDPIYGSTVVAQLINKILLDGKKSIAEDIVYSALDMVKEKTDQEPVAVLKRALDNIRPSLEVRSRRVGGATYQVPVEVKPARANTLSLRWLTDFSRARREKTMAERLANEILDASNGLGASVKRREDTHKMAEANKAFAHYR 306          
BLAST of mRNA_H-elongata_contig172885.4475.1 vs. uniprot
Match: A0A328DPV2_9ASTE (Ribosomal protein S7 n=5 Tax=Pentapetalae TaxID=1437201 RepID=A0A328DPV2_9ASTE)

HSP 1 Score: 275 bits (703), Expect = 1.420e-89
Identity = 136/230 (59.13%), Postives = 180/230 (78.26%), Query Frame = 0
Query:   39 TITPKKPNSAIRKVARVRLTSGFEVTAYIPGIGHNLQEHSVVLLRGGRVKDLPGVRYHVVRGTLDSIGVKDRRQ---------RQFPKPDPVYNSFLVSLFTSKILKNGKKTLATRIIEETFSIIQQRTSEEPLKIFERAVKNVCPSLQVKAKRVGGSTYQVPKEVNKFKGINLALCWIIRFARNRSGPTIAIKLANEIIEASKGSGNSIRKKEETHRMAKSNKAFAHFR 259
            TITPKKPNSA+RKVARVRLTSGFE+TAYIPGIGHNLQEHSVVL+RGGRVKDLPGVRYH+VRGTLD++GVKDR+Q         ++  K DP+Y + LV++  ++ILK+GKK+LA +I+      IQQ T + PL +  +A++ V P L VKA+RV GST+QVP E+   +G  L + W++  +R R G  +A KL++E+++A+KG G++IRKKEETHRMA++N+AFAHFR
Sbjct:   39 TITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRSKYGVLQKKKTKSDPIYRNRLVNMLVNRILKHGKKSLAYQIMYRAVKTIQQNTEKNPLSVLRQAIRGVTPDLTVKARRVSGSTHQVPIEIRSTQGKALFVRWLLAASRKRPGRDMAFKLSSELVDAAKGRGDAIRKKEETHRMAEANRAFAHFR 268          
BLAST of mRNA_H-elongata_contig172885.4475.1 vs. uniprot
Match: X8CAM0_MYCXE (Multifunctional fusion protein n=1 Tax=Mycobacterium xenopi 3993 TaxID=1299333 RepID=X8CAM0_MYCXE)

HSP 1 Score: 274 bits (700), Expect = 5.990e-89
Identity = 149/279 (53.41%), Postives = 199/279 (71.33%), Query Frame = 0
Query:    1 MPTIQQLVRTTRKKVQTRTKSPALKNCPQRRGVCTRVYTITPKKPNSAIRKVARVRLTSGFEVTAYIPGIGHNLQEHSVVLLRGGRVKDLPGVRYHVVRGTLDSIGVKD----------RRQR----QFPKP------DPVYNSFLVSLFTSKILKNGKKTLATRIIEETFSIIQQRTSEEPLKIFERAVKNVCPSLQVKAKRVGGSTYQVPKEVNKFKGINLALCWIIRFARNRSGPTIAIKLANEIIEASKGSGNSIRKKEETHRMAKSNKAFAHFR 259
            MPTIQQLVR  R+    + K+ ALK  PQRRGVCTRVYT TPKKPNSA+RKVARV+LTS  EVTAYIPG GHNLQEHS+VL+RGGRVKDLPGVRY ++RG+LD+ G +           RR+R    Q P P      DPVY S LV+   +K+L  GKK+LA RI+       +++T  +P+   +RA+ NV P+L+V+++RVGG+TYQVP EV   +   LAL W++ ++R R   T+  +LANEI++AS G G S++++E+TH+MA++N+AFAH+R
Sbjct:    1 MPTIQQLVRKGRRDKIGKVKTAALKGSPQRRGVCTRVYTTTPKKPNSALRKVARVKLTSQVEVTAYIPGEGHNLQEHSMVLVRGGRVKDLPGVRYKIIRGSLDTQGSRTASRLAAATAPRRRRADAAQGPAPKRPLVNDPVYGSQLVTQLVNKVLMRGKKSLAERIVYGALEHAREKTGTDPVITLKRALDNVRPALEVRSRRVGGATYQVPVEVRPDRSTTLALRWLVNYSRQRREKTMVERLANEILDASNGLGASVKRREDTHKMAEANRAFAHYR 279          
BLAST of mRNA_H-elongata_contig172885.4475.1 vs. uniprot
Match: A0A6A5L6M8_LUPAL (Ribosomal_S7 domain-containing protein n=3 Tax=cellular organisms TaxID=131567 RepID=A0A6A5L6M8_LUPAL)

HSP 1 Score: 269 bits (688), Expect = 1.160e-87
Identity = 143/259 (55.21%), Postives = 190/259 (73.36%), Query Frame = 0
Query:    1 MPTIQQLVRTTRKKVQTRTKSPALKNCPQRRGVCTRVYTITPKKPNSAIRKVARVRLTSGFEVTAYIPGIGHNLQEHSVVLLRGGRVKDLPGVRYHVVRGTLDSIGVKDRRQRQFPKPDPVYNSFLVSLFTSKILKNGKKTLATRIIEETFSIIQQRTSEEPLKIFERAVKNVCPSLQVKAKRVGGSTYQVPKEVNKFKGINLALCWIIRFARNRSGPTIAIKLANEIIEASKGSGNSIRKKEETHRMAKSNKAFAHFR 259
            MPTIQQLVR  R  ++ ++KSPAL +CPQRRGVCTRVYT TPKKPNSA+RKVARVRLT+G EV AYIPG GHNLQEHS+VL+RGGRVKDLPGVRYH++RG LD+ GV  R QR+             S + +K  K G+   A   ++    I++++TSE  L  +++A+ NV P+++VK++RVGG+ +QVP EV   + I L + W+I +AR R   T+  KLA EII A+KG G +++KKE+TH+MA++NKAF+HFR
Sbjct:    1 MPTIQQLVRKGRVALEDKSKSPALDSCPQRRGVCTRVYTTTPKKPNSAMRKVARVRLTNGKEVNAYIPGEGHNLQEHSIVLIRGGRVKDLPGVRYHIIRGALDTSGVAGRNQRR-------------SKYGTKRPKPGQPAAAPAKVD----IVEKKTSESGLDTWKKALNNVMPAVEVKSRRVGGANFQVPTEVRPERKIALGMKWLISYARKRGEKTMMEKLAGEIISAAKGEGAAVKKKEDTHKMAEANKAFSHFR 242          
BLAST of mRNA_H-elongata_contig172885.4475.1 vs. uniprot
Match: A0A445BJ13_ARAHY (Ribosomal protein S7 n=1 Tax=Arachis hypogaea TaxID=3818 RepID=A0A445BJ13_ARAHY)

HSP 1 Score: 268 bits (684), Expect = 5.400e-86
Identity = 136/246 (55.28%), Postives = 180/246 (73.17%), Query Frame = 0
Query:   39 TITPKKPNSAIRKVARVRLTSGFEVTAYIPGIGHNLQEHSVVLLRGGRVKDLPGVRYHVVRGTLDSIGVKDRRQ-------------------------RQFPKPDPVYNSFLVSLFTSKILKNGKKTLATRIIEETFSIIQQRTSEEPLKIFERAVKNVCPSLQVKAKRVGGSTYQVPKEVNKFKGINLALCWIIRFARNRSGPTIAIKLANEIIEASKGSGNSIRKKEETHRMAKSNKAFAHFR 259
            TITPKKPNSA+RKVARVRLTSGFE+TAYIP IGHNLQEHSVVL+RGGRVKDLPGVRYH+VRGTLD++GVKDR+Q                          +  K +P+Y + LV++  ++ILK+GKK+LA +II      IQQ+T   PL +  +A++ V P + VKA+RVG ST+QVP E+   +G  LA+ W++  +R R G  +A KL++E+++A+KGSG++IRKKEETHRMA++N+AFAHFR
Sbjct:   73 TITPKKPNSALRKVARVRLTSGFEITAYIPDIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAFYKKKQIIPFTLMSRRGTVEEKTAKSNPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGRSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 318          
BLAST of mRNA_H-elongata_contig172885.4475.1 vs. uniprot
Match: K4D762_SOLLC (Ribosomal protein S7 n=1 Tax=Solanum lycopersicum TaxID=4081 RepID=K4D762_SOLLC)

HSP 1 Score: 263 bits (672), Expect = 1.230e-84
Identity = 130/230 (56.52%), Postives = 175/230 (76.09%), Query Frame = 0
Query:   38 YTITPKKPNSAIRKVARVRLTSGFEVTAYIPGIGHNLQEHSVVLLRGGRVKDLPGVRYHVVRGTLDSIGVKDRRQRQF---------PKPDPVYNSFLVSLFTSKILKNGKKTLATRIIEETFSIIQQRTSEEPLKIFERAVKNVCPSLQVKAKRVGGSTYQVPKEVNKFKGINLALCWIIRFARNRSGPTIAIKLANEIIEASKGSGNSIRKKEETHRMAKSNKAFAHF 258
            +TIT KKPNSA+RKVAR+RLTSGFE+TAYIPGIGHN QEHS+VL+RGGRVK LP VRYH+VRGTLD +GVKDR+Q +F          K DP+Y + LV +  ++ILK+GKK+LA +II      IQQ+T   PL +  +A+  V P + VKA+R+GGS++QVP E+   +G  LA+ W++  +R R G  +A KL+ E+++A+KGSG++IRKKEETHRMA++N++FAHF
Sbjct:   55 FTITAKKPNSALRKVARIRLTSGFEITAYIPGIGHNSQEHSIVLVRGGRVKYLPIVRYHIVRGTLDVVGVKDRQQGRFNSRYCRKKIAKSDPIYRNRLVHILVNRILKHGKKSLAYQIIYRAVKKIQQKTETNPLSVLRQAIHGVTPDITVKARRLGGSSHQVPIEIGSTQGKELAIRWLLVASRKRPGRNMAFKLSGELVDAAKGSGDAIRKKEETHRMAEANRSFAHF 284          
BLAST of mRNA_H-elongata_contig172885.4475.1 vs. uniprot
Match: A0A4D6NF64_VIGUN (Ribosomal protein S7 n=1 Tax=Vigna unguiculata TaxID=3917 RepID=A0A4D6NF64_VIGUN)

HSP 1 Score: 270 bits (691), Expect = 2.880e-84
Identity = 136/247 (55.06%), Postives = 183/247 (74.09%), Query Frame = 0
Query:   39 TITPKKPNSAIRKVARVRLTSGFEVTAYIPGIGHNLQEHSVVLLRGGRVKDLPGVRYHVVRGTLDSIGVKDRRQ----------RQFP----------------KPDPVYNSFLVSLFTSKILKNGKKTLATRIIEETFSIIQQRTSEEPLKIFERAVKNVCPSLQVKAKRVGGSTYQVPKEVNKFKGINLALCWIIRFARNRSGPTIAIKLANEIIEASKGSGNSIRKKEETHRMAKSNKAFAHFR 259
            TITPKKPNSA+RKVARVRLTSGFE+TAYIPGIGHNLQEHSVVL+RGGRVKDLPGVRYH+VRGTLD++GVKDR+Q          ++ P                K DP+Y + LV++  ++ILK+GKK+LA +I+ +    IQQ+T    L +  +A++ V P + VKA+ VGGST+QVP E+   +G +LA+ W++  +R RSGP +A KL++E+++A+KGSG++IRKKEET R  ++N+AFAHFR
Sbjct:  295 TITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRSTLIKVLKKRIPPFTLMSWRGTTEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQILYQAMKKIQQKTETNQLSVLRQAIRGVTPDIAVKARSVGGSTHQVPVEIGSVQGKSLAIRWLLGASRKRSGPNMAFKLSSELVDAAKGSGDAIRKKEETRRKTEANRAFAHFR 541          
BLAST of mRNA_H-elongata_contig172885.4475.1 vs. uniprot
Match: A0A538BJP3_9ACTN (30S ribosomal protein S7 n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538BJP3_9ACTN)

HSP 1 Score: 259 bits (661), Expect = 1.660e-83
Identity = 136/259 (52.51%), Postives = 189/259 (72.97%), Query Frame = 0
Query:    1 MPTIQQLVRTTRKKVQTRTKSPALKNCPQRRGVCTRVYTITPKKPNSAIRKVARVRLTSGFEVTAYIPGIGHNLQEHSVVLLRGGRVKDLPGVRYHVVRGTLDSIGVKDRRQRQFPKPDPVYNSFLVSLFTSKILKNGKKTLATRIIEETFSIIQQRTSEEPLKIFERAVKNVCPSLQVKAKRVGGSTYQVPKEVNKFKGINLALCWIIRFARNRSGPTIAIKLANEIIEASKGSGNSIRKKEETHRMAKSNKAFAHFR 259
            MPTIQQLVR  R+  + + K+PALK  PQRRGVCTRV+TITP+KPNSA+RKVARVRLT+G EVT YIPG GHNLQEHS+VL+ GG  KDL GVRY +VRGTLD+ G              VY + LV+   +++L +GKKT+A  I+ +    I Q+T+ +P    +RAV+NV P L+VK++RVGG++YQVP EV   +G  LA+ W++ F+R R   +++ +L  EI++AS G+G +++++E+ H+MA++NKAFAH+R
Sbjct:    1 MPTIQQLVRKGRETPKKKNKAPALKANPQRRGVCTRVWTITPRKPNSALRKVARVRLTTGVEVTCYIPGEGHNLQEHSIVLVHGGGPKDLGGVRYTIVRGTLDTAGA-------------VYQNPLVTQLINRVLLSGKKTVAEHIVYDALEQISQKTANDPAITLKRAVENVRPLLEVKSRRVGGASYQVPVEVKPQRGTTLAMRWLVNFSRARRENSMSERLVAEIMDASNGAGAAVKRREDMHKMAEANKAFAHYR 246          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig172885.4475.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S6UA20_9STRA7.540e-9796.0830S ribosomal protein S7, chloroplastic n=1 Tax=Sc... [more]
A0A812SXH1_SYMMI3.650e-9653.85Ribosomal protein S7 n=1 Tax=Symbiodinium microadr... [more]
R6G9Q3_9BIFI2.700e-9149.67Multifunctional fusion protein n=28 Tax=Bacteria T... [more]
A0A328DPV2_9ASTE1.420e-8959.13Ribosomal protein S7 n=5 Tax=Pentapetalae TaxID=14... [more]
X8CAM0_MYCXE5.990e-8953.41Multifunctional fusion protein n=1 Tax=Mycobacteri... [more]
A0A6A5L6M8_LUPAL1.160e-8755.21Ribosomal_S7 domain-containing protein n=3 Tax=cel... [more]
A0A445BJ13_ARAHY5.400e-8655.28Ribosomal protein S7 n=1 Tax=Arachis hypogaea TaxI... [more]
K4D762_SOLLC1.230e-8456.52Ribosomal protein S7 n=1 Tax=Solanum lycopersicum ... [more]
A0A4D6NF64_VIGUN2.880e-8455.06Ribosomal protein S7 n=1 Tax=Vigna unguiculata Tax... [more]
A0A538BJP3_9ACTN1.660e-8352.5130S ribosomal protein S7 n=1 Tax=Actinomycetia bac... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006032Ribosomal protein S12/S23PRINTSPR01034RIBOSOMALS12coord: 94..110
score: 59.23
coord: 42..57
score: 86.63
coord: 58..77
score: 75.97
coord: 77..94
score: 86.11
coord: 27..42
score: 76.04
IPR006032Ribosomal protein S12/S23PFAMPF00164Ribosom_S12_S23coord: 12..110
e-value: 6.6E-40
score: 135.3
IPR006032Ribosomal protein S12/S23PANTHERPTHR1165230S RIBOSOMAL PROTEIN S12 FAMILY MEMBERcoord: 1..115
IPR006032Ribosomal protein S12/S23PROSITEPS00055RIBOSOMAL_S12coord: 43..50
NoneNo IPR availableGENE3D2.40.50.140coord: 1..115
e-value: 1.1E-57
score: 195.3
NoneNo IPR availablePANTHERPTHR11652:SF128S RIBOSOMAL PROTEIN S12, MITOCHONDRIALcoord: 1..115
IPR005679Ribosomal protein S12, bacterial-typeTIGRFAMTIGR00981TIGR00981coord: 1..113
e-value: 1.2E-61
score: 204.1
IPR005679Ribosomal protein S12, bacterial-typeHAMAPMF_00403_BRibosomal_S12_Bcoord: 1..133
score: 35.85
IPR023798Ribosomal protein S7 domainPFAMPF00177Ribosomal_S7coord: 111..253
e-value: 1.9E-50
score: 170.4
IPR005717Ribosomal protein S7, bacterial/organellar-typeTIGRFAMTIGR01029TIGR01029coord: 111..259
e-value: 2.8E-52
score: 174.7
IPR005717Ribosomal protein S7, bacterial/organellar-typeHAMAPMF_00480_BRibosomal_S7_Bcoord: 108..260
score: 29.533
IPR036823Ribosomal protein S7 domain superfamilyGENE3D1.10.455.10coord: 116..260
e-value: 1.1E-50
score: 173.2
IPR036823Ribosomal protein S7 domain superfamilySUPERFAMILY47973Ribosomal protein S7coord: 110..253
IPR020606Ribosomal protein S7, conserved sitePROSITEPS00052RIBOSOMAL_S7coord: 124..150
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 2..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig172885contigH-elongata_contig172885:307..1188 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig172885.4475.1mRNA_H-elongata_contig172885.4475.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig172885 307..1188 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig172885.4475.1 ID=prot_H-elongata_contig172885.4475.1|Name=mRNA_H-elongata_contig172885.4475.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=261bp
MPTIQQLVRTTRKKVQTRTKSPALKNCPQRRGVCTRVYTITPKKPNSAIR
KVARVRLTSGFEVTAYIPGIGHNLQEHSVVLLRGGRVKDLPGVRYHVVRG
TLDSIGVKDRRQRQFPKPDPVYNSFLVSLFTSKILKNGKKTLATRIIEET
FSIIQQRTSEEPLKIFERAVKNVCPSLQVKAKRVGGSTYQVPKEVNKFKG
INLALCWIIRFARNRSGPTIAIKLANEIIEASKGSGNSIRKKEETHRMAK
SNKAFAHFRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006032Ribosomal_S12/S23
IPR005679Ribosomal_S12_bac
IPR023798Ribosomal_S7_dom
IPR005717Ribosomal_S7_bac/org-type
IPR036823Ribosomal_S7_dom_sf
IPR020606Ribosomal_S7_CS
IPR012340NA-bd_OB-fold