prot_H-elongata_contig17281.4472.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig17281.4472.1
Unique Nameprot_H-elongata_contig17281.4472.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length190
Homology
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BLAST of mRNA_H-elongata_contig17281.4472.1 vs. uniprot
Match: A0A6H5JD75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD75_9PHAE)

HSP 1 Score: 138 bits (347), Expect = 2.820e-34
Identity = 88/183 (48.09%), Postives = 109/183 (59.56%), Query Frame = 0 
Query:    1 VQEAHTAKLAGRSVVADSLAHAARLVRDGLSAAVNSA--DTSDPRGVEADEPFLNATSQAEAAAEVVAQVLTRERLSAEQAEKERQETCSELWSASRRLEELDTAGVVRDDPEAVATVLEARSEVVQALVALEGVDDPAKKLGDAQVTMKRASMAEECFAEAQRKLQCFDAAADVLGQAESRI 181
            + +A  AK+AGRS V  SL  A   +R  LS AV+SA  D   P G+E D+  L A  +AE AAE     + RER          QE C+ELWSA+RRLE LDT  VV DDPEA A VLEARSE V  L+ALE  +DP+  L  AQ  +++AS+ EE   E QR ++CFD A   L QAE  +
Sbjct: 2114 IADAEAAKVAGRSAVVGSLTAAVCEIRVALSVAVDSAADDELGPGGIEHDDSLLAAAGRAEQAAEAAGNRVARERXXXXXXXXXXQERCAELWSAARRLESLDTDSVVADDPEAAAMVLEARSEAVNVLMALEAAEDPSDVLDSAQAALEKASLVEENLVETQRTVRCFDDATSFLEQAEGLV 2296
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BLAST of mRNA_H-elongata_contig17281.4472.1 vs. uniprot
Match: D7G576_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G576_ECTSI)

HSP 1 Score: 134 bits (336), Expect = 8.430e-33
Identity = 89/183 (48.63%), Postives = 106/183 (57.92%), Query Frame = 0 
Query:    1 VQEAHTAKLAGRSVVADSLAHAARLVRDGLSAAVNSA--DTSDPRGVEADEPFLNATSQAEAAAEVVAQVLTRERLSAEQAEKERQETCSELWSASRRLEELDTAGVVRDDPEAVATVLEARSEVVQALVALEGVDDPAKKLGDAQVTMKRASMAEECFAEAQRKLQCFDAAADVLGQAESRI 181
            + +A  AK+A RS V  SL  A R VR  L  AV SA  D   PR +E D+  L A   AE AAE     + RER          QE C+ELWSA+RRLE LDT  VV DDPEA A VLEARSE V  L+ALE  +DP+  L  AQ  +++AS+ EE   E QR + CFD AA  L QAE  +
Sbjct: 2052 IADAEAAKVARRSAVVGSLTAAVREVRVALCVAVGSAADDELGPRDIEHDDAVLAAAGLAEQAAEAAGNRVARERXXXXXXXXXXQERCAELWSAARRLEGLDTDSVVADDPEAAAMVLEARSEAVNVLMALEAAEDPSDLLDSAQAALEKASLVEENLVETQRTVCCFDDAASFLEQAEGLV 2234
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17281.4472.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JD75_9PHAE2.820e-3448.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G576_ECTSI8.430e-3348.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17281contigH-elongata_contig17281:2146..2965 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17281.4472.1mRNA_H-elongata_contig17281.4472.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig17281 1602..2965 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig17281.4472.1 ID=prot_H-elongata_contig17281.4472.1|Name=mRNA_H-elongata_contig17281.4472.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=190bp
VQEAHTAKLAGRSVVADSLAHAARLVRDGLSAAVNSADTSDPRGVEADEP
FLNATSQAEAAAEVVAQVLTRERLSAEQAEKERQETCSELWSASRRLEEL
DTAGVVRDDPEAVATVLEARSEVVQALVALEGVDDPAKKLGDAQVTMKRA
SMAEECFAEAQRKLQCFDAAADVLGQAESRIVPGSPCQV*
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