prot_H-elongata_contig17274.4468.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig17274.4468.1
Unique Nameprot_H-elongata_contig17274.4468.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length377
Homology
BLAST of mRNA_H-elongata_contig17274.4468.1 vs. uniprot
Match: A0A6H5KG66_9PHAE (PH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG66_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 8.940e-24
Identity = 84/201 (41.79%), Postives = 100/201 (49.75%), Query Frame = 0
Query:   25 KEFARCRRLNEVVSAALGSKACDALENAFSAS-----------ASG--------------TPLRKTSGLFRR-----------SSVAMIFPTALSSPG--------------------GRSKEAGG---SPRAGTGYGCPLDDGEAAAAVALGALEVRRGLRFCMKVHRFREMCRPGSCVAIRKRWAYAADALEELCPGAT 166
            +E+ARCRRLN  +S+ALGS+ CD LE  F +S           +SG              TPL +TSGLFRR                      ++PG                     RS + G    S R   G G  +D  E      L A EVRR +RFCMKVHR+RE+CRPGSCVA RKRWAYAADALEELCPGA+
Sbjct:  566 EEYARCRRLNVALSSALGSRTCDTLEAEFYSSHVADRPVAGRCSSGGGSVGGGWLPLPHPTPLPRTSGLFRRLPQGPXXXXXXXXXXXXXXXXRATPGLVSGSQSXXXXXXXXXXXXLARSADGGATASSARGAAGGGATIDSAERP---WLAASEVRRAMRFCMKVHRYREICRPGSCVAFRKRWAYAADALEELCPGAS 763          
BLAST of mRNA_H-elongata_contig17274.4468.1 vs. uniprot
Match: D8LCW3_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCW3_ECTSI)

HSP 1 Score: 109 bits (273), Expect = 2.390e-22
Identity = 84/216 (38.89%), Postives = 103/216 (47.69%), Query Frame = 0
Query:   25 KEFARCRRLNEVVSAALGSKACDALENAFSAS-----------ASG---------------TPLRKTSGLFRRSSVAMIFPTALSSPGGRSKEAGGSPRAGTGYGCPLDDG--------------------------------EAAAAVALGALEVRRGLRFCMKVHRFREMCRPGSCVAIRKRWAYAADALEELCPGATDR------NHWPTSSP 176
            +E+ARCRRLN  +S+ALGS+ACD LE  F +S           +SG               +PL +TSGLFRR  +    P    S    +     +P   +G   PL                                   ++A    L A EVRR +RFCMKVHR+RE+CRPGSCVA RKRWAYAADALEELCPGA+         HW   SP
Sbjct:  601 EEYARCRRLNVTLSSALGSRACDTLEADFYSSHAADRPVAGRGSSGXXXXXXXGWLPLPPPSPLPRTSGLFRR--LPQGPPPTTYSASAAASAVRATPGLVSGCRSPLLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATVDSAERPWLAASEVRRAMRFCMKVHRYREICRPGSCVAFRKRWAYAADALEELCPGASTAAAADLSRHWNPPSP 814          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17274.4468.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KG66_9PHAE8.940e-2441.79PH domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D8LCW3_ECTSI2.390e-2238.89PH domain-containing protein n=1 Tax=Ectocarpus si... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17274contigH-elongata_contig17274:252..2112 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17274.4468.1mRNA_H-elongata_contig17274.4468.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig17274 102..2207 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig17274.4468.1 ID=prot_H-elongata_contig17274.4468.1|Name=mRNA_H-elongata_contig17274.4468.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=377bp
MHLSRCCYYTKYMIVPVTAPILKKKEFARCRRLNEVVSAALGSKACDALE
NAFSASASGTPLRKTSGLFRRSSVAMIFPTALSSPGGRSKEAGGSPRAGT
GYGCPLDDGEAAAAVALGALEVRRGLRFCMKVHRFREMCRPGSCVAIRKR
WAYAADALEELCPGATDRNHWPTSSPSPGLGTGCTKNIVAGDEEGEPRAN
ATATSSSSPKLVLPVPDPDPAPDVAVDAASVVALEPESDDQPPVVPDGVS
VAVGRGVVDGATAGLLPEVPPSKPATASAKALPVPVATLAVGPNLLLLLP
RPPLLPVSPEKIVAVAREVQSYRDSTASGSTRLGGRGYSSPPSPPPSPSP
SPPVPPPKYLLDALLTEVSRVLGDDP*
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