mRNA_H-elongata_contig17270.4466.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig17270.4466.1 vs. uniprot
Match: D7FQ42_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ42_ECTSI) HSP 1 Score: 395 bits (1016), Expect = 2.760e-126 Identity = 235/418 (56.22%), Postives = 279/418 (66.75%), Query Frame = 1
Query: 958 ASHETTTRGAAPSLMAKGNDWDGR--------ASWCLQALE--AIDPQAAL-LGTENAWIVKPAGLSCGRGVRATRSLRGLLLACQQLGWKAVVQKYVERPLLVQGYKFDIRQWILVTSCNPLVVWGFDECYVRFASKPFTMSTSKLSDKFVHLCNHSVQKER-GRGD--CGA--------FNEGGGRESFE-----GQESRPSGSRGHMWTADQLGAYLLDRFEGDDVFRDIILPRIRAVAVQTLLAVRESLEMRGKALEWLGFDLMLTEDLRVMLLEVNVSPDVSHSTPVTARLVPVATEDALALLLDDGLADARAAALCSSGHRHEVPQRHPGTEDGKSKPRKSTTSKSTTEFDECQACARGGGAIKREAEL--RADEVPRWRLWHKGEEELAGDLGSLREAKKIFFEARRQLRR 2124
A+H TT A S+ + + + R A L+AL+ DPQAAL LG NAW+VKPAGLSCGRGV SLR L+ AC+QL WKAVVQKYVERPLLVQGYKFDIRQW+LVTSCNPLVVWGFDE Y RF+S+PFTM LSD+ VHLCNHSVQK++ GRGD C A N S E G+E+ PSGS+ +MWTA QL +L RF+G DVF+++++PRIR+V VQTLL VRE LEM+G+A+EWLGFDLM+ EDLRVML+EVNVSPDVSHSTPVTARLVP ATEDAL+LLLDDG AD RAAA G +P +P +S ++ T + G +RE E R + PRWR+WHKGEEE L LREAKK + E RR RR
Sbjct: 3 AAHGTTEDSKARSVEGREAEEEARGVSSSVAMARELLRALDEGGTDPQAALCLGPANAWVVKPAGLSCGRGVEVASSLRTLVSACRQLEWKAVVQKYVERPLLVQGYKFDIRQWVLVTSCNPLVVWGFDESYTRFSSRPFTMDAPSLSDRLVHLCNHSVQKQQNGRGDESCAASASATATGMNNDSSVSSKEAGSGGGRETLPSGSQQNMWTAGQLRNHLQQRFQGHDVFQEVVVPRIRSVVVQTLLGVREELEMKGRAVEWLGFDLMVAEDLRVMLIEVNVSPDVSHSTPVTARLVPDATEDALSLLLDDGEADKRAAATPLPG----LP--NPCHSSSRSTGAEAAGEAKTVSGPDFSRVHDPGVGDRREGEASPRVVDKPRWRVWHKGEEESRTVLRGLREAKKTWCEKRRNKRR 414
BLAST of mRNA_H-elongata_contig17270.4466.1 vs. uniprot
Match: A0A6H5KWV8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWV8_9PHAE) HSP 1 Score: 385 bits (990), Expect = 3.020e-120 Identity = 273/629 (43.40%), Postives = 350/629 (55.64%), Query Frame = 1
Query: 403 LLEAFVVSAAVALIRR--DMEVKVSSKRENAPRSGVTLRDINPMDVLRAASSVISRYITHKHVTSSQNTPEPARTCRGTAECVK---PAHSSDHPTLYDSVPR-ACYAARVYGVALSMQDPDCVAVVSAWE-AIATKAGETSEEEIGADDKDLTNGDPDYDMTPPSRHATGAAAVCTE---------GSVFIRALQ-------SEKAI---ASHETTTRGAAPSLMAK--------GNDWDGRASWCLQALE--AIDPQAAL-LGTENAWIVKPAGLSCGRGVRATRSLRGLLLACQQLGWKAVVQKYVERPLLVQGYKFDIRQWILVTSCNPLVVWGFDECYVRFASKPFTMSTSKLSDKFVHLCNHSVQKERGR------------------GDCGAFNEGGGRESFEGQESRPSGSRGHMWTADQLGAYLLDRFEGDDVFRDIILPRIRAVAVQTLLAVRESLEMRGKALEWLGFDLMLTEDLRVMLLEVNVSPDVSHSTPVTARLVPVATEDALALLLDDGLADARAAALCSSGHRHEVPQRHPGTEDGKSKPRKSTTSKSTTEFDECQACARGGGAIKREAELRADEVPRWRLWHKGEEELAGDLGSLREAKKIFFEARRQLRR 2124
+L AF VSAAVAL+R + E + +R++ G + L AA+SV SRY S TP + T C++ P + + R A AA + G D + +++AWE A A A + + +++G S HA G CTE GSV ++ SE + A+H +T A S+ + G+ A L+AL+ DPQAAL LG NAW+VKPAGLSCG+GV SLR L+ AC+QL WKAVVQKYVERPLLVQGYKFDIRQW+LVTSCNPLVVWGF+E Y RF+S+PFTM LSD+ VHLCNHSVQK++ R D + E G S G+E+ PSGS+ +MWTA QL +L RF+G DVF+++++P+IR+V VQTLL VRE LEM+G+A+EWLGFDL++ EDLRVML+EVNVSPDVSHST VTARLVP ATEDAL+LLLD+G AD RAAA G + P T + K+ + + G +REA R + RW +WHKGEEE L LREAKK + E RR +R
Sbjct: 1 MLRAFAVSAAVALLRTAVNAEGEACGERQDGSGGGSSRTKAVGSATLAAATSVASRYA------SFLQTPLITQPTSATGRCLQAGPPPSGRERCVGHKRSGRDAINAAVIVG------DQEFTTILTAWETAAAAAAAQGAVKKVG------------------SGHAGG----CTEEQGSATGKGGSVAPEPVEVAEEDPGSEPRLEKNAAHGSTEDSRARSVEGREAEEEAIGGSSSIAMACELLRALDEDGADPQAALCLGPANAWVVKPAGLSCGKGVEVASSLRALVSACRQLEWKAVVQKYVERPLLVQGYKFDIRQWVLVTSCNPLVVWGFEESYTRFSSRPFTMDAPSLSDRLVHLCNHSVQKQQNRRGDESCASSASATATGVNDDRSSSKEAG---SGGGRETLPSGSQQNMWTAGQLRHHLRQRFQGHDVFQEVVVPQIRSVVVQTLLGVREELEMKGRAVEWLGFDLLVAEDLRVMLIEVNVSPDVSHSTSVTARLVPDATEDALSLLLDNGEADKRAAATPLPGLPNPCHSSSPSTGAEAAGEAKTVPGPDFSRVHDPGV----GDWREREASPRVVDKLRWHVWHKGEEESRTVLRGLREAKKAWCEKRRNKKR 588
BLAST of mRNA_H-elongata_contig17270.4466.1 vs. uniprot
Match: A0A835ZKD6_9STRA (Tubulin-tyrosine ligase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKD6_9STRA) HSP 1 Score: 223 bits (567), Expect = 3.600e-59 Identity = 222/722 (30.75%), Postives = 296/722 (41.00%), Query Frame = 1
Query: 4 FIADDKFVDVIRVLERRGWVR--------------SRHSKSP--NFLLKWRNLSNIKFRMLRGDQFVNHVFNSQQLSNKALLADHLAFQHHRLRHQPHRSNADSSDFAPDVDGINGCSYPVVKKGMNSTADPEAFFPRCFSVQDGALSALLEAFVVSAAVALIRRDMEVKVSSKRENAPRSGVTLRDINPMDVLRAASSVISRYITHKHVTSSQNTPEPARTCRGTAECVKPAHSSDHPTLYDSVPRACYAARVYGVALSMQDPDCVAVVSAWEAIATKAGETSEEEIGADDKDLTNGDPDYDMTPPSRHATGAAAVCTEGSVFIRALQSEKAIASHETTTRGAAPSLMAKGNDWDGRASWCLQALEAIDPQAALLGTE-NAWIVKPAGLSCGRGVRATRSLRGLLLACQQLGWKAVVQKYVERPLLVQG-YKFDIRQWILVTSCNPLVVWGFDECYVRFASKPFTMSTSKLSDKFVHLCNHSVQKER---------------GRGDC---GAFN-EGGGRESFEGQESRP-----------------SGSRGH---MWTADQLGAYLL-------------------------------DRFEGDDV-------------FRDIILPRIRAVAVQTLLAVRESLEMRGKALEWLGFDLML-TEDLRVMLLEVNVSPDVSH---------STPVTARLVPVATEDALALLLDDGLADARAAA 1836
F+ADDKF DV+R+ E RG++R +H ++ + L+WRNL++ F+ L+ Q VNH+ ++QQLSNKALL+ HL D A ++ G + A + +FPRC+S+ D A L A+ + AAVA ++R E P + T V AA + + R+ +SS S+ H T +VP + A +G SR AA C E GA + + G RA L A A D QAAL G NAWI+KP GLSCGRG++ + LR L A L + V+QKYVERPLL+ G KFD+RQW++VTS PLVVWG+ E Y R AS+P++ + D+F+HLCNH+VQ R C GA N + EG E+ P +G+R MW+A +L A+ + D +G + +LP +R V LLAVR L R EWLGFDL+L E RV+LLEVNVSPDVSH STPVTA LVP AT DAL LL+D+G A AA
Sbjct: 8 FVADDKFSDVVRICEERGFLRVSAPVVQAHVLQLKQQHFEADVADISLQWRNLASTDFKALKKTQLVNHLQHAQQLSNKALLSAHL-------------------DRA-------------LRSGTAAGASVDRYFPRCWSMLDSGPEAFLRAYGIGAAVAALQRMQE---------EPPAPAT-------PVFTAALTTLERWCAWARSSSS---------------------SAQHYTT-KNVPASVLA------------------------------------VG------------------SREWRALAAWC-------------------EGLAAGAPGDVRSGGAAAAARARAALAAF-ARDAQAALHGGGMNAWILKPVGLSCGRGIQVIQGLRALAEASAALRHRVVIQKYVERPLLLPGGRKFDLRQWVMVTSVAPLVVWGYSEAYARLASRPYSSDAAHAGDRFMHLCNHAVQCVRPQLPPPPPLYNEIAVAESPCRCEGASNLSSASTQGSEGGEALPPPAQRLGAGGTTAAAGAAGTRDECATMWSAARLRAHTMPSSSTAGSXXXXXXXXXXXXXGAGNFDSMHADSTQGSSASTSGGVNNGNVSGYDAWVLPAVREAVVGALLAVRGLLRKRACGFEWLGFDLLLPAEGERVLLLEVNVSPDVSHRQDAPAIVCSTPVTAALVPGATADALRLLIDEGHAQPLRAA 585
BLAST of mRNA_H-elongata_contig17270.4466.1 vs. uniprot
Match: A0A8J2X0Y3_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X0Y3_9STRA) HSP 1 Score: 214 bits (544), Expect = 6.540e-58 Identity = 122/260 (46.92%), Postives = 154/260 (59.23%), Query Frame = 1
Query: 1048 ALEAID--PQAALL-GTENAWIVKPAGLSCGRGVRATRSLRGLLLACQQLGWKAVVQKYVERPLLVQGYKFDIRQWILVTSCNP-LVVWGFDECYVRFASKPFTMSTSKLSDKFVHLCNHSVQKERGRGDCGAFNEGGGRESFEGQESRPSGSRGHMWTADQLGAYLLDRFEGDDVFRDIILPRIRAVAVQTL-LAVRESLEMRGKALEWLGFDLMLTEDLRVMLLEVNVSPDVSHSTPVTARLVPVATEDALALLLDDG 1812
AL A D PQAA++ G W++KPAG SCG GV + S++ LL A W+ VVQKY+ERPL KFD+RQW+L+++ P LV+WGF E Y RFA + F +S + L DKF HLCN+S+QK+ D +MW+ QL A++ DR G F + IRA+AV A R +E G EWLG D+++ EDL LLE NVSPDVSHST VTA LVP ATEDALALLLD+G
Sbjct: 170 ALRAFDARPQAAVVDGAAGVWVLKPAGGSCGEGVVCSTSVQELLAAAMARRWRVVVQKYIERPLTPLARKFDVRQWVLLSAVRPKLVLWGFSEAYARFAQQRFALSDASLRDKFAHLCNYSIQKDAPAADDAIAE--------------------NMWSQAQLAAHI-DRIYGAGSFEARVRAGIRAIAVAVAETAARLDVEKVGHGFEWLGLDIIVGEDLSCYLLEANVSPDVSHSTAVTAALVPAATEDALALLLDEG 408
BLAST of mRNA_H-elongata_contig17270.4466.1 vs. uniprot
Match: A0A7S3JS53_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JS53_9STRA) HSP 1 Score: 206 bits (523), Expect = 8.170e-56 Identity = 112/251 (44.62%), Postives = 151/251 (60.16%), Query Frame = 1
Query: 1069 QAALLGTENAWIVKPAGLSCGRGVRATRSLRGLLLACQQLGWKAVVQKYVERPLLVQGYKFDIRQWILVTSCNPLVVWGFDECYVRFASKPFTMSTSKLSDKFVHLCNHSVQKERGRGDCGAFNEGGGRESFEGQESRPSGSRGHMWTADQLGAYLLDRFEGDDVFRDIILPRIRAVAVQTLLAVRES-LEMRGKALEWLGFDLMLTEDLRVMLLEVNVSPDVSHSTPVTARLVPVATEDALALLLDDGLA 1818
Q L +++KPAG SCG G+ S+ L+ QQ +K VVQKY+ERPLLV+G KFDIRQWIL+T NPL V+GF CY RFAS+ + +++ L ++F HLCN SVQ + D A + P + +MWT QL A++ D + F + P++R +A+ +++ ++ R EWLG D+ML +DL LLE NVSPDVSHSTPVT+ LVP AT DAL+LLLD G A
Sbjct: 97 QLILQDVGGIYLIKPAGGSCGDGISCVSSIEALISQAQQRQYKVVVQKYIERPLLVRGRKFDIRQWILITDTNPLTVYGFSRCYARFASESWNLNS--LHNRFAHLCNFSVQTFSQQQDITA------------DDFPPF--QNNMWTCQQLAAFI-DTTQEPGTFDSFVRPQLRQIAIAVATTAKKAGMQKRAYGFEWLGLDIMLADDLSAWLLEANVSPDVSHSTPVTSALVPAATIDALSLLLDHGAA 330
BLAST of mRNA_H-elongata_contig17270.4466.1 vs. uniprot
Match: W4H713_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H713_9STRA) HSP 1 Score: 192 bits (489), Expect = 1.320e-50 Identity = 114/256 (44.53%), Postives = 151/256 (58.98%), Query Frame = 1
Query: 1042 LQALEAIDPQAALLGTENAWIVKPAGLSCGRGVRATRSLRGLLLACQQLGWKAVV-QKYVERPLLVQGYKFDIRQWILVTSCNPLVVWGFDECYVRFASKPFTMS-TSKLSDKFVHLCNHSVQKERGRGDCGAFNEGGGRESFEGQESRPSGSRGHMWTADQLGAYLLDRFEGDDVFRDIILPRIRAVAVQTLLAVRESLEMRGKALEWLGFDLMLTEDLRVMLLEVNVSPDVSHSTPVTARLVPVATEDALALLL 1803
L LEA DPQ + T N WI KP GLS GRG++ + + + KAVV Q+YVERPLLV G KFDIRQW+LVT+ PL ++ CY+RF+SKP++++ L DKF+HLCN+S+QK A N G P + HMW+ D+ +L + G D + LP ++ A++ +L+V+ +L G+ EWLG D +L E L LLEVNVSPDVSHST TA LVP AT D L L+L
Sbjct: 182 LTHLEACDPQFHFVSTRNLWIAKPTGLSQGRGIQILSTPKQVQAYMADAQLKAVVLQQYVERPLLVLGRKFDIRQWVLVTATAPLTIYWHRHCYLRFSSKPYSVTHDGDLDDKFIHLCNNSIQKT-------APNAG---------NDHPDIPQ-HMWSLDRFLLHL-SQVGGRDRWDSATLPAMQHAAIEAILSVQSNLTRVGRGFEWLGLDFILDERLHPWLLEVNVSPDVSHSTSTTADLVPQATRDLLDLVL 419
BLAST of mRNA_H-elongata_contig17270.4466.1 vs. uniprot
Match: A0A8J8T6D5_HALGN (Uncharacterized protein n=1 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8T6D5_HALGN) HSP 1 Score: 192 bits (488), Expect = 3.130e-49 Identity = 109/290 (37.59%), Postives = 168/290 (57.93%), Query Frame = 1
Query: 1042 LQALEAIDPQAALLGTENAWIVKPAGLSCGRGVRATRSLRGLLLACQQLGWKA-VVQKYVERPLLVQGYKFDIRQWILVTSCNPLVVWGFDECYVRFASKPFTMSTSKLSDKFVHLCNHSVQKERGRGDCGAFNEGGGRESFEGQESRPSGSRGHMWTADQLGAYLLDRF---EGDDVFRDIILPRIRAVAVQTLLAVRESLEMRGKALEWLGFDLMLTEDLRVMLLEVNVSPDVSHSTPVTARLVPVATEDALALLLDDGLADARAAALCSSG-----HRHEVPQRHPG 1884
L L++ DPQ + G N WI+KP G S GRG++ RS ++ +++ + VVQKY+E PLL+ KFDIRQW+LVT NPL +W ++ECYVRF+ K + K+SD+++HL N+++ + C AF+E S G+MW+ D+ YL F +G D+F+++I P++ V +L +V++ +E R + E+LG+D M+ E L+V L+EVN SP + HST VT RLV + D ++LD AR A C +G H++++ PG
Sbjct: 314 LDKLKSKDPQYDINGFRNTWILKPGGKSRGRGIKCFRSYEKMMAHMRKVHARQWVVQKYIENPLLILKKKFDIRQWVLVTDWNPLTIWVYNECYVRFSPKDY--DPKKISDRYMHLTNNAIVSK-----CEAFHE--------------SEIEGNMWSCDEFSEYLQTTFGGKQGKDIFQEVIWPQMSKYVVCSLESVQDMVEARKNSFEFLGYDFMVDEQLKVWLIEVNSSPSMDHSTHVTERLVKMVLSDLPKVILD--YPRARKKAQCDTGGFVLCHKNKIMVEKPG 580
BLAST of mRNA_H-elongata_contig17270.4466.1 vs. uniprot
Match: A0A7S2WMP3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WMP3_9STRA) HSP 1 Score: 191 bits (484), Expect = 6.900e-49 Identity = 109/263 (41.44%), Postives = 147/263 (55.89%), Query Frame = 1
Query: 1042 LQALEAIDPQAALLGTENAWIVKPAGLSCGRGVRATRSLRGLLLACQQLGWKAVVQKYVERPLLVQGYKFDIRQWILVTSCNPLVVWGFDECYVRFASKPFTMSTSKLSDKFVHLCNHSVQKERGRGDCGAFNEGGGRESFEGQESRPSGSRGHMWTADQLGAYLLDRFEGDDVFRDIILPRIRAVAVQTLLAVRESLEMRGKALEWLGFDLMLTE----DLRVMLLEVNVSPDVSHSTPVTARLVPVATEDALALLLDDGLA 1818
+ A++A++ + L G E WIVKP LSCGRG+R S+ + +LG+ AVVQKY+ERP LV KFDIR W+ VTS PLVVW F Y+RF+ + ++++ L D+ HLCN SVQK+ G E+ G S G+M +A+ L ++ +R + + L A SL G EWLG D+M+ E LR L+EVN SPDVSHSTP+TAR+VPVAT D L L+LD+ A
Sbjct: 119 IAAVDAVNGDSCLYGQEAVWIVKPGNLSCGRGIRCLASIADVAGCVAELGFNAVVQKYIERPFLVHRRKFDIRLWVAVTSVRPLVVWAFSHFYLRFSGREYSLND--LGDRLTHLCNFSVQKD-------------GPEASPGDASSSPTIVGNMMSAEDFAEVL------GPAGLHALVASMRGMTLDALRATAHSLTKVGVGFEWLGLDVMVAEAPDGGLRPYLIEVNCSPDVSHSTPITARIVPVATADLLDLVLDENQA 360
BLAST of mRNA_H-elongata_contig17270.4466.1 vs. uniprot
Match: A0A024UHR8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UHR8_9STRA) HSP 1 Score: 187 bits (476), Expect = 1.050e-48 Identity = 109/254 (42.91%), Postives = 148/254 (58.27%), Query Frame = 1
Query: 1051 LEAIDPQAALLGTENAWIVKPAGLSCGRGVRATRSLRGLLLACQQLGWK--AVVQKYVERPLLVQGYKFDIRQWILVTSCNPLVVWGFDECYVRFASKPFTMS-TSKLSDKFVHLCNHSVQKERGRGDCGAFNEGGGRESFEGQESRPSGSRGHMWTADQLGAYLLDRFEGDDVFRDIILPRIRAVAVQTLLAVRESLEMRGKALEWLGFDLMLTEDLRVMLLEVNVSPDVSHSTPVTARLVPVATEDALALLL 1803
LEA DPQ + T N WIVKPAGLS GR ++ S R + A Q K VVQ+YVERPLL+ KFDIRQWI++T+ PL ++ +CY+RF+SKP++++ L+D FVHLCNHS+QK + P + HMW+ D+ +L + D + D LP ++ A++ +L++ L+ G EWLG D +L E + LLEVNVSPDVSHST TA +VP AT D L L+L
Sbjct: 190 LEACDPQFHFVSTRNLWIVKPAGLSQGRDIQIISS-RIEMEAYMQAANKRQVVVQQYVERPLLIFDRKFDIRQWIVITNTAPLTIYWHRQCYLRFSSKPYSLAHDDDLNDTFVHLCNHSLQKTNPN------------------DQHPDIPQ-HMWSVDRFLVHL-SQVGRRDSWDDTTLPAMQRAAIEAVLSIHSKLKRVGNGFEWLGLDFLLDERMHPWLLEVNVSPDVSHSTSTTAAMVPQATRDLLKLVL 422
BLAST of mRNA_H-elongata_contig17270.4466.1 vs. uniprot
Match: A0A1V9ZX07_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZX07_9STRA) HSP 1 Score: 186 bits (473), Expect = 2.010e-48 Identity = 104/256 (40.62%), Postives = 148/256 (57.81%), Query Frame = 1
Query: 1042 LQALEAIDPQAALLGTENAWIVKPAGLSCGRGVRATRSLRGLLLACQQLGWKAVVQKYVERPLLVQGYKFDIRQWILVTSCNPLVVWGFDECYVRFASKPFTMSTSK-LSDKFVHLCNHSVQKERGRGDCGAFNEGGGRESFEGQESRPSGSRGHMWTADQLGAYLLDRFEGDDVFRDIILPRIRAVAVQTLLAVRESLEMRGKALEWLGFDLMLTEDLRVMLLEVNVSPDVSHSTPVTARLVPVATEDALALLLD 1806
LQ L D Q + + T N WI KP+GLS GRG+ S+ L Q G K VVQKYVERPL + G KFDIRQW+LVT +PL V+ +DECY+RF++K + +S+ DK +HLCN+S+QK + P +MW++ Q ++L + +++ I+P ++ ++ + +V L G+ EWLG D ++ E+ LLEVNVSPDVSHST TA LVP AT+D L+++LD
Sbjct: 186 LQHLVRCDKQFSFISTRNLWIAKPSGLSQGRGIEMITSIAELDQMGLQEGAKFVVQKYVERPLTILGRKFDIRQWVLVTKVHPLCVYWYDECYLRFSAKEYNISSDGGQHDKTMHLCNNSIQK------------------YVDIPHHPE-IPDNMWSSQQFQSHL-EHVGKHEIWLRQIIPAMKFACIEAIRSVEHKLRRVGQGFEWLGLDFIIDEEFHPWLLEVNVSPDVSHSTSTTAALVPKATQDMLSIILD 421 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17270.4466.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig17270.4466.1 >prot_H-elongata_contig17270.4466.1 ID=prot_H-elongata_contig17270.4466.1|Name=mRNA_H-elongata_contig17270.4466.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=715bp VFIADDKFVDVIRVLERRGWVRSRHSKSPNFLLKWRNLSNIKFRMLRGDQback to top mRNA from alignment at H-elongata_contig17270:2603..6703- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig17270.4466.1 ID=mRNA_H-elongata_contig17270.4466.1|Name=mRNA_H-elongata_contig17270.4466.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4101bp|location=Sequence derived from alignment at H-elongata_contig17270:2603..6703- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig17270:2603..6703- >mRNA_H-elongata_contig17270.4466.1 ID=mRNA_H-elongata_contig17270.4466.1|Name=mRNA_H-elongata_contig17270.4466.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4290bp|location=Sequence derived from alignment at H-elongata_contig17270:2603..6703- (Himanthalia elongata Himel1 dioecious)back to top |