prot_H-elongata_contig17221.4450.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig17221.4450.1
Unique Name	prot_H-elongata_contig17221.4450.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	191

Homology

[Close]

BLAST of mRNA_H-elongata_contig17221.4450.1 vs. uniprot
Match: D8LSA0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSA0_ECTSI)

HSP 1 Score: 191 bits (486), Expect = 3.400e-53
Identity = 127/202 (62.87%), Postives = 151/202 (74.75%), Query Frame = 0

Query:    2 QASLELEQERARSLQQEVTVLVHDLEAARATEAVVEKQRQEHANLAADAFAKASRLEQQLQQEKALLRTIGAAVPASVGSESQIQQLLSSKLLDKQARLEESVRERATLSVKLKDALERANRAEYELRESRGDSLETGADGE-----------GKRESRRRLGTGFGGRSSGGAA-WSRLAPIAKHKKIATAIDVIDRRTLQ 191
            QASLELEQER RSL+QEV +L HDL++ARATEAVVE+QRQEHA +AAD+FAKASRLEQQLQQE+A  + + A+VP   G E+QIQ  LSSKLLDKQARLEESV ER TL+ KL++A +RA RAE ELRESRG++LE G               G   +RR    G  GR S  A  WSRL PIAKHKKIA+A+DV+DR+TL+
Sbjct:  661 QASLELEQERTRSLKQEVDLLKHDLDSARATEAVVERQRQEHAKMAADSFAKASRLEQQLQQERASAKRLEASVPTPAGPEAQIQ-ALSSKLLDKQARLEESVTERTTLAAKLREASDRAFRAEQELRESRGETLEAGGXXXXXXXXXXXXXVGVMRARR----GRQGRGSPTAGTWSRLGPIAKHKKIASAVDVLDRQTLK 857

[Close]

BLAST of mRNA_H-elongata_contig17221.4450.1 vs. uniprot
Match: A0A6H5L6L5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6L5_9PHAE)

HSP 1 Score: 185 bits (469), Expect = 8.490e-51
Identity = 126/204 (61.76%), Postives = 151/204 (74.02%), Query Frame = 0

Query:    2 QASLELEQERARSLQQEVTVLVHDLEAARATEAVVEKQRQEHANLAADAF---AKASRLEQQLQQEKALLRTIGAAVPASVGSESQIQQLLSSKLLDKQARLEESVRERATLSVKLKDALERANRAEYELRESRGDSLETGADGE----------GKRESRRRLGTGFGGRSSGGAA-WSRLAPIAKHKKIATAIDVIDRRTLQ 191
            QASLELEQER RSLQQEV +L HDL++ARATEAVVE+QRQEHA +AAD+F   +KASRLEQQLQQE+A  + + A+VP   G E+QIQ  LSSKLL+KQARLEESV ER TL+ KL++A +RA RAE ELRESRG++LE G              G   +RR    G  GRSS  A  WSR  PIAKHKKIA+A+DV+DR+TL+
Sbjct:  698 QASLELEQERTRSLQQEVGLLKHDLDSARATEAVVERQRQEHAKMAADSFGKCSKASRLEQQLQQERASAKRLEASVPTPAGPEAQIQ-ALSSKLLEKQARLEESVTERTTLTAKLREASDRAFRAEQELRESRGETLEAGGXXXXXXXXXXXXVGVMRARR----GRQGRSSPTAGTWSRFGPIAKHKKIASAVDVLDRQTLK 896

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig17221.4450.1 vs. uniprot

BLAST of mRNA_H-elongata_contig17221.4450.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LSA0_ECTSI	3.400e-53	62.87	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L6L5_9PHAE	8.490e-51	61.76	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 100..134
None	No IPR available	COILS	Coil	Coil	coord: 47..67

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig17221	contig	H-elongata_contig17221:226..5060 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig17221.4450.1	mRNA_H-elongata_contig17221.4450.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig17221 223..5060 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig17221.4450.1 ID=prot_H-elongata_contig17221.4450.1|Name=mRNA_H-elongata_contig17221.4450.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=191bp
MQASLELEQERARSLQQEVTVLVHDLEAARATEAVVEKQRQEHANLAADA
FAKASRLEQQLQQEKALLRTIGAAVPASVGSESQIQQLLSSKLLDKQARL
EESVRERATLSVKLKDALERANRAEYELRESRGDSLETGADGEGKRESRR
RLGTGFGGRSSGGAAWSRLAPIAKHKKIATAIDVIDRRTLQ