prot_H-elongata_contig172090.4444.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig172090.4444.1
Unique Nameprot_H-elongata_contig172090.4444.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length280
Homology
BLAST of mRNA_H-elongata_contig172090.4444.1 vs. uniprot
Match: A0A8F0FAP1_9PHAE (Cytochrome c biogenesis protein CcsA n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAP1_9PHAE)

HSP 1 Score: 504 bits (1298), Expect = 7.070e-179
Identity = 260/279 (93.19%), Postives = 269/279 (96.42%), Query Frame = 0
Query:    1 MLFDNYCNFFSNSIFIFLLIATVFYWFSLRFTRVDFYYKFAKINSRVATAILFIFLLSRWIQNGYFPLSNLYESLLFLSCIILFVYQFIEYKTKSKIFGAILLPLVLFITGFADLTLPLEMRKASALVPALQSNWLMMHVSLMMLSYAILIVGSLVSILFLIIFLSLSKDSEISFTXXXXXXXXARAENIEVRDLYNLFIDPLDKMSASKKKEIRESRKLEFLYNLDNWGYRTISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLIFAAY 279
            M FDNYCNFFSNSIFIFLLI+TVFYWFSLRFT+VDFYYKFAK+NSRVAT ILF+FLLSRWIQNGYFPLSNLYESLLFLSCIILFVYQFIEYKTKSKIFGAILLPLVLFITGFADLTLPLEMRKASALVPALQSNWLMMHVSLMMLSYAILIVGSLVSILFLIIFLSLSKDSEISFT        ARAENIE+RDLYN+F+DPLDKMSASK+KE+RESRKLEFLYNLDNWGYRTISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLIFAAY
Sbjct:    1 MFFDNYCNFFSNSIFIFLLISTVFYWFSLRFTKVDFYYKFAKLNSRVATIILFVFLLSRWIQNGYFPLSNLYESLLFLSCIILFVYQFIEYKTKSKIFGAILLPLVLFITGFADLTLPLEMRKASALVPALQSNWLMMHVSLMMLSYAILIVGSLVSILFLIIFLSLSKDSEISFTSYGSYEEYARAENIEIRDLYNVFLDPLDKMSASKQKELRESRKLEFLYNLDNWGYRTISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLIFAAY 279          
BLAST of mRNA_H-elongata_contig172090.4444.1 vs. uniprot
Match: A0A8E5XRE0_9PHAE (Cytochrome c biogenesis protein CcsA n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRE0_9PHAE)

HSP 1 Score: 318 bits (814), Expect = 2.060e-105
Identity = 172/280 (61.43%), Postives = 209/280 (74.64%), Query Frame = 0
Query:    1 MLFDNYCNFFSNSIFIFLLIATVFYWFSLRFTRVDFYYKFAKINSRVATAILFIFLLSRWIQNGYFPLSNLYESLLFLSCIILFVYQFIEYKTKSKIFGAILLPLVLFITGFADLTLPLEMRKASALVPALQSNWLMMHVSLMMLSYAILIVGSLVSILFLIIFLSLSKDSEISFTXXXXXXXXARAENIEVRD-LYNLFIDPLDKMSASKKKEIRESRKLEFLYNLDNWGYRTISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLIFAAY 279
            M F+ Y +FF+NS+F+ L I+T+FYW SL F ++   Y  A+  S +A  ILF+FL +RWI  GYFPLSNLYESLLFLSC++L V++F+EY+T+SK+FGA LLP++L IT FADLTLPLEM+KA+ALVP+LQSNWLMMHVSLMMLSYA+LI+GSL+SILFLI+ L +  + E  FT            N E  + + NL      K    + K +        L NLDNW YRTISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWL+FAAY
Sbjct:    1 MNFEIYSSFFTNSLFLCLFISTIFYWISLIFNKLKRSYSIARSTSLIANIILFLFLANRWIVFGYFPLSNLYESLLFLSCMLLLVHRFLEYRTQSKLFGATLLPIILLITSFADLTLPLEMQKANALVPSLQSNWLMMHVSLMMLSYAVLIIGSLISILFLIVCLPIKVNYEEKFTNT----------NYEAGESIINLITQQPIKGELEQLKILYNMDYNSLLNNLDNWSYRTISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLVFAAY 270          
BLAST of mRNA_H-elongata_contig172090.4444.1 vs. uniprot
Match: A0A8F0F862_9PHAE (Cytochrome c biogenesis protein CcsA n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F862_9PHAE)

HSP 1 Score: 318 bits (814), Expect = 3.180e-105
Identity = 175/284 (61.62%), Postives = 208/284 (73.24%), Query Frame = 0
Query:    1 MLFDNYCNFFSNSIFIFLLIATVFYWFSLRFTRVDFYYKFAKINSRVATAILFIFLLSRWIQNGYFPLSNLYESLLFLSCIILFVYQFIEYKTKSKIFGAILLPLVLFITGFADLTLPLEMRKASALVPALQSNWLMMHVSLMMLSYAILIVGSLVSILFLIIFLSLSKDSEISFTXXXXXXXXARAENIEVRDLYNLFIDPLDKMSASKKKEIRESR-----KLEFLYNLDNWGYRTISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLIFAAY 279
            M+ DNY N F NS+FI L I+++FYW SLR T+    Y  AK  +R+A   LFIFL +RW   GYFPLSNLYESLLFL+C++  V+Q +EY+T+SK FG I+LP++LFIT FADLTLPLEM+KASALVPALQSNWLMMHVSLMMLSYAIL++GSL SI+FLI FL L K+S  S T          A  IE      L  + ++       + I++       K++FL  LDNW YRTISLGFP LTIGIIAGAVWANEAWGSYWSWDPKETWALITWL+FAAY
Sbjct:    1 MVADNYFNIFKNSLFICLFISSIFYWVSLRITKFKMLYTVAKFTARIANLSLFIFLATRWGNYGYFPLSNLYESLLFLACLLSLVHQILEYQTQSKFFGTIILPIILFITSFADLTLPLEMQKASALVPALQSNWLMMHVSLMMLSYAILLLGSLFSIIFLITFLPLPKESS-SITKDFFSTQSEIALKIEEDFQKYLNSNSVEAGGIQINESIQKYYDLNLLKIKFLITLDNWSYRTISLGFPLLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLVFAAY 283          
BLAST of mRNA_H-elongata_contig172090.4444.1 vs. uniprot
Match: A0A8F0F9V5_9PHAE (Cytochrome c biogenesis protein CcsA n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9V5_9PHAE)

HSP 1 Score: 317 bits (811), Expect = 8.760e-105
Identity = 173/286 (60.49%), Postives = 215/286 (75.17%), Query Frame = 0
Query:    1 MLFDNYCNFFSNS------IFIFLLIATVFYWFSLRFTRVDFYYKFAKINSRVATAILFIFLLSRWIQNGYFPLSNLYESLLFLSCIILFVYQFIEYKTKSKIFGAILLPLVLFITGFADLTLPLEMRKASALVPALQSNWLMMHVSLMMLSYAILIVGSLVSILFLIIFLSLSKDSE-ISFTXXXXXXXXARAENIEVRDLYNLFIDPLDKMSASKKKEIRESRKLEFLYNLDNWGYRTISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLIFAAY 279
            MLF NY +  SNS      +FI  L++TVFYWFSL F  +  +   AK+ SR A+ ILF+FL +RW+++GYFPLSNLYESLLFLSCI+LFVYQ +EYKT+S +FG I++P+VLFITGFA LTLPLEM+KA+ALVPALQSNWLMMHVSLMMLSYAILI+GS  SI+++  FL L    + I            ++ N+       L +D +     +++++I  + + +FLY++DNW YR ISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLIFAAY
Sbjct:    1 MLFQNYFDACSNSSTFNNILFISCLVSTVFYWFSLGFKNIKIFGSLAKVTSRFASLILFVFLSNRWLESGYFPLSNLYESLLFLSCILLFVYQILEYKTQSSLFGCIIVPIVLFITGFAALTLPLEMQKANALVPALQSNWLMMHVSLMMLSYAILIMGSAFSIVYVGAFLELEDYIKTIPVRAAEYEKQIRKSLNLTRSQFLYLGLDVI----YNEEEDIVINNRTKFLYHIDNWSYRAISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLIFAAY 282          
BLAST of mRNA_H-elongata_contig172090.4444.1 vs. uniprot
Match: A0A516ICR2_9PHAE (Cytochrome c biogenesis protein CcsA n=27 Tax=Laminariales TaxID=2886 RepID=A0A516ICR2_9PHAE)

HSP 1 Score: 310 bits (794), Expect = 3.310e-102
Identity = 172/281 (61.21%), Postives = 208/281 (74.02%), Query Frame = 0
Query:    3 FDNYCN---FFSNSIFIFLLIATVFYWFSLRFTRVDFYYKFAKINSRVATAILFIFLLSRWIQNGYFPLSNLYESLLFLSCIILFVYQFIEYKTKSKIFGAILLPLVLFITGFADLTLPLEMRKASALVPALQSNWLMMHVSLMMLSYAILIVGSLVSILFLIIFLSLSKDSE-ISFTXXXXXXXXARAENIEVRDLYNLFIDPLDKMSASKKKEIRESRKLEFLYNLDNWGYRTISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLIFAAY 279
            F N CN    F+N +F   L++T+FYWFSL F  +  +   AKI SR AT  LF+FLL+RWIQ GYFPLSNLYESLLFLSCI+LFV Q +E KT+S +FG I++P+VLFITGFA LTLPLEM+KASALVPALQSNWLMMHVSLMMLSYAILI+GS  +I+++  FL L    + I            +  N+       L +D +     +++++I  + + +FLYN+DNW YR ISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLIFAAY
Sbjct:    6 FFNVCNDSNIFNNILFACCLVSTIFYWFSLGFKNIKVFSTLAKITSRFATLSLFVFLLNRWIQFGYFPLSNLYESLLFLSCILLFVSQALESKTQSLLFGCIIVPIVLFITGFAALTLPLEMQKASALVPALQSNWLMMHVSLMMLSYAILIIGSSFAIVYVGSFLELEDYIKTIPVRAAEYEKHMRKTLNLTKSQFLYLGLDVI----YNEEEDIVINNRTKFLYNIDNWSYRAISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLIFAAY 282          
BLAST of mRNA_H-elongata_contig172090.4444.1 vs. uniprot
Match: A0A2I4Q2E4_9PHAE (Cytochrome c biogenesis protein CcsA n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2E4_9PHAE)

HSP 1 Score: 306 bits (784), Expect = 6.200e-101
Identity = 162/279 (58.06%), Postives = 208/279 (74.55%), Query Frame = 0
Query:    1 MLFDNYCNFFSNSIFIFLLIATVFYWFSLRFTRVDFYYKFAKINSRVATAILFIFLLSRWIQNGYFPLSNLYESLLFLSCIILFVYQFIEYKTKSKIFGAILLPLVLFITGFADLTLPLEMRKASALVPALQSNWLMMHVSLMMLSYAILIVGSLVSILFLIIFLSLSKDSEISFTXXXXXXXXARAENIEVRDLYNLFIDPLDKMSASKKKEIRESRKLEFLYNLDNWGYRTISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLIFAAY 279
            M+ D+Y   F N +F  L  +T+FYWFSL+F  +   + FA+INS  AT +LF FLL+RW+  GYFP+SNLYESLLFLSC++L ++Q +EY+T+S+IFGA+LLP +LFIT FADLTLPLEM+KA+ALVP+LQSNWLMMHVSLM+LSYAIL++GSL SI+FL++FL   + +EI+             + ++++ +    I     + A +          EFL+ LDNW Y+ ISLGFP LTIGIIAGAVWANEAWGSYWSWDPKETWALITWL+FAAY
Sbjct:    1 MIMDDYFTGFKNILFFCLFSSTIFYWFSLKFQILKKLHDFARINSIFATFLLFFFLLNRWVTYGYFPISNLYESLLFLSCLLLIIHQILEYQTQSRIFGALLLPSILFITSFADLTLPLEMQKATALVPSLQSNWLMMHVSLMLLSYAILLLGSLFSIIFLVLFLPSERKNEIN-------------DKLKIKTITKKSIFAFYNIKAFEPY----IPSTEFLFILDNWSYKMISLGFPLLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLVFAAY 262          
BLAST of mRNA_H-elongata_contig172090.4444.1 vs. uniprot
Match: A0A2R4QPY5_9PHAE (Cytochrome c biogenesis protein CcsA n=4 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QPY5_9PHAE)

HSP 1 Score: 298 bits (764), Expect = 1.890e-97
Identity = 171/304 (56.25%), Postives = 208/304 (68.42%), Query Frame = 0
Query:    1 MLFDNYCNFFSNSIFIFLLIATVFYWFSLRFTRVDFYYKFAKINSRVATAILFIFLLSRWIQNGYFPLSNLYESLLFLSCIILFVYQFIEYKTKSKIFGAILLPLVLFITGFADLTLPLEMRKASALVPALQSNWLMMHVSLMMLSYAILIVGSLVSILFL---IIFLSLSKDSE-------------ISFTXXXXXXXX---------ARAENIEVRDLYNLFIDPLDKMSASKKKEIRESRKLEFLYNLDNWGYRTISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLIFAAY 279
            ML +NYCN  +NS+FI + I+T  YWF L F  +  +    KI SR AT  +F+FLL RWI  GYFPLSNLYESLLFLS I+LF+YQF+E K +S IFG I+LPLVL I+GF++LTLPLEM+KASALVPALQSNWLMMHVSLMMLSYAIL++GS  SI++L   I+FL   +  E             I+FT                 + +   ++  L N+F++         ++ + +S +  FL  LD W  RTISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLIFAAY
Sbjct:    1 MLSENYCNLLNNSLFILVFISTALYWFRLSFKSITIFNTIGKITSRFATLSIFLFLLIRWIDYGYFPLSNLYESLLFLSFILLFLYQFLESKAQSPIFGGIVLPLVLLISGFSELTLPLEMQKASALVPALQSNWLMMHVSLMMLSYAILLIGSAFSIVYLVTSIVFLYNLESVEKRYFDYQEFMRGLINFTRGMNLTREDYQTRSSIQSPSACCQIISLNNIFLE---------QEALAQSARTNFLSQLDKWSSRTISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLIFAAY 295          
BLAST of mRNA_H-elongata_contig172090.4444.1 vs. uniprot
Match: A0A7S6U9V9_9STRA (Cytochrome c biogenesis protein CcsA n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6U9V9_9STRA)

HSP 1 Score: 296 bits (759), Expect = 1.530e-96
Identity = 168/308 (54.55%), Postives = 206/308 (66.88%), Query Frame = 0
Query:    1 MLFDNYCNFFSNSIFIFLLIATVFYWFSLRFTRVDFYYKFAKINSRVATAILFIFLLSRWIQNGYFPLSNLYESLLFLSCIILFVYQFIEYKTKSKIFGAILLPLVLFITGFADLTLPLEMRKASALVPALQSNWLMMHVSLMMLSYAILIVGSLVSILFLIIFLSLSKD-SEISFTXXXXXXXXARAENIEVRDLYNLFIDPLDKMSASKKKEIRESR----------------------------KLEFLYNLDNWGYRTISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLIFAAY 279
            M+ D Y NFF N IF FL I+ + YW S  F      Y  A+INS +A  IL +FL++RWI +GYFPLSNLYESLLFLSCI+LF++Q IEYK +SK+ GAILLP++LFI GF+ LTLP+EM+KAS+LVPALQSNWLMMHVSLMMLSYA LI+GSL+SILF +IF++  KD S++           +     E+ D+    +   D ++  K     +S                             ++  L+ +D W YR ISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLIFAAY
Sbjct:    1 MILDTYQNFFINIIFGFLFISLICYWISFVFKEFQICYIAARINSYIANIILVVFLMNRWINHGYFPLSNLYESLLFLSCILLFIHQIIEYKIQSKLLGAILLPIILFINGFSSLTLPIEMQKASSLVPALQSNWLMMHVSLMMLSYATLILGSLLSILFSLIFVTAPKDLSKLVKPWERPFKTNSFERLYELTDIDRYELPQQDFLTRGKFTASSDSFFEISPGLQTAIPNYDWRYEFSRSFSVIFRIRLLHKIDIWSYRIISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLIFAAY 308          
BLAST of mRNA_H-elongata_contig172090.4444.1 vs. uniprot
Match: A0A6B7IK16_9PHAE (Cytochrome c biogenesis protein CcsA n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7IK16_9PHAE)

HSP 1 Score: 288 bits (737), Expect = 1.250e-93
Identity = 159/277 (57.40%), Postives = 197/277 (71.12%), Query Frame = 0
Query:    4 DNYCNFFSNSIFIFLLIATVFYWFSLRFTRVDFYYKFAKINSRVATAILFIFLLSRWIQNGYFPLSNLYESLLFLSCIILFVYQFIEYKTKSKIFGAILLPLVLFITGFADLTLPLEMRKASALVPALQSNWLMMHVSLMMLSYAILIVGSLVSILFLIIFLSLSKDSEISFTXXXXXXXXARAE-NIEVRDLYNLFIDPLDKMSASKKKEIRESRKLEFLYNLDNWGYRTISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLIFAAY 279
              + N FSNSIF+    +T+ YW  L     +      KI SR AT  +FI L  RW++ GYFPLSNLYESLLFLSC++LFVYQ +EYK ++ +FG I+LP+VLFIT FA   LPLEM+KASALVPALQSNWLMMHVSLMMLSY++LIVGS ++IL+L++FL   +   +            R E  ++ R+ Y      LD++   ++  I + R   FLYN+D+W +R+ISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWL FAAY
Sbjct:    5 SEHINLFSNSIFVSCFFSTLAYWTILSMKDSNILRTIGKITSRFATLSIFILLTDRWVEFGYFPLSNLYESLLFLSCLLLFVYQVLEYKIQTPVFGGIILPIVLFITAFAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLIVGSSLAILYLVLFLEFEEYIRMMPIRKIAYEKSVRKELGLKTREEYLRL--GLDRIYIDEQATILKIRTT-FLYNIDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAY 278          
BLAST of mRNA_H-elongata_contig172090.4444.1 vs. uniprot
Match: A0A2U9NM76_9STRA (Cytochrome c biogenesis protein CcsA n=1 Tax=Proboscia sp. TaxID=1923967 RepID=A0A2U9NM76_9STRA)

HSP 1 Score: 285 bits (729), Expect = 1.380e-92
Identity = 157/277 (56.68%), Postives = 194/277 (70.04%), Query Frame = 0
Query:    4 DNYCNFFSNSIFIFLLIATVFYWFSLRFT-RVDFYYKFAKINSRVATAILFIFLLSRWIQNGYFPLSNLYESLLFLSCIILFVYQFIEYKTKSKIFGAILLPLVLFITGFADLTLPLEMRKASALVPALQSNWLMMHVSLMMLSYAILIVGSLVSILFLIIFLSLSKDSEISFTXXXXXXXXARAENIEVRDLYNLFIDPLDKMSASKKKEIRESRKLEFLYNLDNWGYRTISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLIFAAY 279
            DN  N+ SN +F FLL   + YW +L F  RV  + K  +I+S  A  +LF  L SRWI +GYFPLSNLYESLLFL+  +L +Y +IE+KTKSK+ GAIL+P+ L I GFA+LTL  +M+KAS LVPALQSNWLMMHVS+MMLSYA+LI+GSL+ ILFL+I  S SKD ++                     LYN+ ++  +    S   E  E  KL+ L+++DNW YR I LGFPFLT+GIIAG VWANEAWGSYWSWDPKETWALITW+IFA Y
Sbjct:    4 DNIQNYLSNIVFAFLLFGMIIYWVNLLFLPRVKSFSKVGRISSIFANLLLFFILCSRWIISGYFPLSNLYESLLFLTWTLLTIYLYIEFKTKSKLMGAILIPVALLINGFANLTLSADMQKASPLVPALQSNWLMMHVSMMMLSYAMLIMGSLLCILFLVI--SKSKDVDLQVLDK------------SYSPLYNVMVNYYEAKLFSPSDEFLELGKLKLLHSIDNWSYRIIGLGFPFLTVGIIAGGVWANEAWGSYWSWDPKETWALITWIIFATY 266          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig172090.4444.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8F0FAP1_9PHAE7.070e-17993.19Cytochrome c biogenesis protein CcsA n=1 Tax=Desma... [more]
A0A8E5XRE0_9PHAE2.060e-10561.43Cytochrome c biogenesis protein CcsA n=1 Tax=Ishig... [more]
A0A8F0F862_9PHAE3.180e-10561.62Cytochrome c biogenesis protein CcsA n=1 Tax=Proto... [more]
A0A8F0F9V5_9PHAE8.760e-10560.49Cytochrome c biogenesis protein CcsA n=1 Tax=Chord... [more]
A0A516ICR2_9PHAE3.310e-10261.21Cytochrome c biogenesis protein CcsA n=27 Tax=Lami... [more]
A0A2I4Q2E4_9PHAE6.200e-10158.06Cytochrome c biogenesis protein CcsA n=1 Tax=Dicty... [more]
A0A2R4QPY5_9PHAE1.890e-9756.25Cytochrome c biogenesis protein CcsA n=4 Tax=Fucac... [more]
A0A7S6U9V9_9STRA1.530e-9654.55Cytochrome c biogenesis protein CcsA n=1 Tax=Schiz... [more]
A0A6B7IK16_9PHAE1.250e-9357.40Cytochrome c biogenesis protein CcsA n=1 Tax=Clado... [more]
A0A2U9NM76_9STRA1.380e-9256.68Cytochrome c biogenesis protein CcsA n=1 Tax=Probo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002541Cytochrome c assembly proteinPFAMPF01578Cytochrom_C_asmcoord: 68..279
e-value: 1.6E-59
score: 201.3
IPR017562Cytochrome c-type biogenesis protein CcsATIGRFAMTIGR03144TIGR03144coord: 47..279
e-value: 9.9E-79
score: 262.6
NoneNo IPR availablePANTHERPTHR30071:SF9coord: 9..279
NoneNo IPR availablePANTHERPTHR30071HEME EXPORTER PROTEIN Ccoord: 9..279
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 98..117
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 229..252
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 137..165
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 87..97
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 62..66
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 43..61
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 118..136
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 253..279
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 166..228
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 67..86
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 32..42
NoneNo IPR availableTMHMMTMhelixcoord: 97..119
NoneNo IPR availableTMHMMTMhelixcoord: 145..167
NoneNo IPR availableTMHMMTMhelixcoord: 229..251
NoneNo IPR availableTMHMMTMhelixcoord: 10..29
NoneNo IPR availableTMHMMTMhelixcoord: 42..61
NoneNo IPR availableTMHMMTMhelixcoord: 71..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig172090contigH-elongata_contig172090:443..1282 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig172090.4444.1mRNA_H-elongata_contig172090.4444.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig172090 443..1351 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig172090.4444.1 ID=prot_H-elongata_contig172090.4444.1|Name=mRNA_H-elongata_contig172090.4444.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=280bp
MLFDNYCNFFSNSIFIFLLIATVFYWFSLRFTRVDFYYKFAKINSRVATA
ILFIFLLSRWIQNGYFPLSNLYESLLFLSCIILFVYQFIEYKTKSKIFGA
ILLPLVLFITGFADLTLPLEMRKASALVPALQSNWLMMHVSLMMLSYAIL
IVGSLVSILFLIIFLSLSKDSEISFTSYSSYEEYARAENIEVRDLYNLFI
DPLDKMSASKKKEIRESRKLEFLYNLDNWGYRTISLGFPFLTIGIIAGAV
WANEAWGSYWSWDPKETWALITWLIFAAY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002541Cyt_c_assembly
IPR017562Cyt_c_biogenesis_CcsA